FFCP PHASE1:Hg19::chr12:8765415..8765422,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57379|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13203|TSSclassifier=S|UniProt=|association_with_transcript=-18bp_to_ENST00000545576_5end|coexpression_cluster_id=C62|description=CAGE_peak_4_at_AICDA_5end|id=chr12:8765415..8765422,-|ontology_enrichment_celltype=CL:0000945!1.15e-40!24;CL:0000826!1.15e-40!24;CL:0000542!1.75e-25!53;CL:0000051!1.75e-25!53;CL:0000838!7.67e-22!52;CL:0000819!1.18e-11!1;CL:0002087!3.07e-10!119;CL:0000738!1.96e-08!140;CL:0002031!3.99e-08!124;CL:0000988!3.09e-07!182;CL:0002032!7.02e-07!165;CL:0000837!7.02e-07!165|ontology_enrichment_celltype_v019=CL:0000785;1.81e-40;1!CL:0000819;1.81e-40;1!CL:0000945;5.74e-27;24!CL:0000542;2.76e-10;53|ontology_enrichment_celltype_v019_2=CL:0000819,2.21e-40,1;CL:0000945,5.93e-27,24;CL:0000826,5.93e-27,24;CL:0000785,5.70e-21,2;CL:0000955,5.70e-21,2;CL:0000818,5.70e-21,2;CL:0000954,5.70e-21,2;CL:0000816,5.70e-21,2;CL:0000817,1.83e-14,3;CL:0000838,7.25e-13,52;CL:0000542,1.23e-12,53;CL:0000051,1.23e-12,53|ontology_enrichment_development_v019=UBERON:0001045;1.81e-40;1!CL:0000954;5.15e-21;2!CL:0000051;2.76e-10;53|ontology_enrichment_disease=DOID:0060058!4.23e-36!10;DOID:0060073!1.18e-11!1;DOID:8675!1.18e-11!1;DOID:630!1.31e-11!1;DOID:0050177!1.31e-11!1;DOID:0050427!1.31e-11!1;DOID:0060060!3.63e-11!1;DOID:0060061!3.63e-11!1;DOID:8691!3.63e-11!1;DOID:12603!4.44e-11!1;DOID:2531!5.15e-09!51;DOID:0060083!5.15e-09!51|ontology_enrichment_disease_v019=DOID:630;1.81e-40;1!DOID:0050177;1.81e-40;1!DOID:0060073;1.81e-40;1!DOID:8675;1.81e-40;1!DOID:0050427;1.81e-40;1!DOID:0060058;3.05e-36;10|ontology_enrichment_disease_v019_2=DOID:0060073,2.21e-40,1;DOID:8675,2.21e-40,1;DOID:630,3.30e-40,1;DOID:0050177,3.30e-40,1;DOID:0050427,3.30e-40,1;DOID:0060058,2.70e-36,10;DOID:2531,8.20e-08,51;DOID:0060083,8.20e-08,51|ontology_enrichment_uberon=UBERON:0002106!2.77e-14!3;UBERON:0004854!2.77e-14!3;UBERON:0009034!2.77e-14!3;UBERON:0002095!2.77e-14!3;UBERON:0004782!2.77e-14!3;UBERON:0003281!2.77e-14!3;UBERON:0009664!2.77e-14!3;UBERON:0002296!2.77e-14!3;UBERON:0005602!2.77e-14!3;UBERON:0001179!2.77e-14!3;UBERON:0006293!2.77e-14!3;UBERON:0004177!2.89e-13!7;UBERON:0001154!1.06e-11!1;UBERON:0001153!1.06e-11!1;UBERON:0002372!2.68e-11!1;UBERON:0001961!2.68e-11!1;UBERON:0001744!2.68e-11!1;UBERON:0001735!2.68e-11!1|ontology_enrichment_uberon_v019=UBERON:0001154;1.81e-40;1!UBERON:0001153;1.81e-40;1!UBERON:0009854;1.81e-40;1!UBERON:0009856;3.26e-11;4!UBERON:0004907;3.10e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.48e-40,1;UBERON:0001153,1.48e-40,1;UBERON:0001045,1.48e-40,1;UBERON:0004907,2.97e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.492603536699674,0.787107813136792,0,0,0,0,0,0,6.04244164526353,1.9903692548239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,1.45963831372533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0.999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293|short_description=p4@AICDA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=57379 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13203 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000545576_5end | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_4_at_AICDA_5end | |||
|id=chr12:8765415..8765422,- | |||
|ontology_enrichment_celltype=CL:0000945!1.15e-40!24;CL:0000826!1.15e-40!24;CL:0000542!1.75e-25!53;CL:0000051!1.75e-25!53;CL:0000838!7.67e-22!52;CL:0000819!1.18e-11!1;CL:0002087!3.07e-10!119;CL:0000738!1.96e-08!140;CL:0002031!3.99e-08!124;CL:0000988!3.09e-07!182;CL:0002032!7.02e-07!165;CL:0000837!7.02e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000785;1.81e-40;1!CL:0000819;1.81e-40;1!CL:0000945;5.74e-27;24!CL:0000542;2.76e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.21e-40,1;CL:0000945,5.93e-27,24;CL:0000826,5.93e-27,24;CL:0000785,5.70e-21,2;CL:0000955,5.70e-21,2;CL:0000818,5.70e-21,2;CL:0000954,5.70e-21,2;CL:0000816,5.70e-21,2;CL:0000817,1.83e-14,3;CL:0000838,7.25e-13,52;CL:0000542,1.23e-12,53;CL:0000051,1.23e-12,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.81e-40;1!CL:0000954;5.15e-21;2!CL:0000051;2.76e-10;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.23e-36!10;DOID:0060073!1.18e-11!1;DOID:8675!1.18e-11!1;DOID:630!1.31e-11!1;DOID:0050177!1.31e-11!1;DOID:0050427!1.31e-11!1;DOID:0060060!3.63e-11!1;DOID:0060061!3.63e-11!1;DOID:8691!3.63e-11!1;DOID:12603!4.44e-11!1;DOID:2531!5.15e-09!51;DOID:0060083!5.15e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:630;1.81e-40;1!DOID:0050177;1.81e-40;1!DOID:0060073;1.81e-40;1!DOID:8675;1.81e-40;1!DOID:0050427;1.81e-40;1!DOID:0060058;3.05e-36;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.21e-40,1;DOID:8675,2.21e-40,1;DOID:630,3.30e-40,1;DOID:0050177,3.30e-40,1;DOID:0050427,3.30e-40,1;DOID:0060058,2.70e-36,10;DOID:2531,8.20e-08,51;DOID:0060083,8.20e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.77e-14!3;UBERON:0004854!2.77e-14!3;UBERON:0009034!2.77e-14!3;UBERON:0002095!2.77e-14!3;UBERON:0004782!2.77e-14!3;UBERON:0003281!2.77e-14!3;UBERON:0009664!2.77e-14!3;UBERON:0002296!2.77e-14!3;UBERON:0005602!2.77e-14!3;UBERON:0001179!2.77e-14!3;UBERON:0006293!2.77e-14!3;UBERON:0004177!2.89e-13!7;UBERON:0001154!1.06e-11!1;UBERON:0001153!1.06e-11!1;UBERON:0002372!2.68e-11!1;UBERON:0001961!2.68e-11!1;UBERON:0001744!2.68e-11!1;UBERON:0001735!2.68e-11!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.81e-40;1!UBERON:0001153;1.81e-40;1!UBERON:0009854;1.81e-40;1!UBERON:0009856;3.26e-11;4!UBERON:0004907;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.48e-40,1;UBERON:0001153,1.48e-40,1;UBERON:0001045,1.48e-40,1;UBERON:0004907,2.97e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.492603536699674,0.787107813136792,0,0,0,0,0,0,6.04244164526353,1.9903692548239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,1.45963831372533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0.999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | |||
|short_description=p4@AICDA | |||
}} |
Revision as of 00:45, 11 September 2013
Short description: | p4@AICDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_AICDA_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | -18bp_to_ENST00000545576_5end |
EntrezGene: | AICDA |
HGNC: | 13203 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.21e-40 | 1 |
lymphocyte of B lineage | 5.93e-27 | 24 |
pro-B cell | 5.93e-27 | 24 |
mature B cell | 5.70e-21 | 2 |
pre-B-II cell | 5.70e-21 | 2 |
transitional stage B cell | 5.70e-21 | 2 |
small pre-B-II cell | 5.70e-21 | 2 |
immature B cell | 5.70e-21 | 2 |
precursor B cell | 1.83e-14 | 3 |
lymphoid lineage restricted progenitor cell | 7.25e-13 | 52 |
lymphocyte | 1.23e-12 | 53 |
common lymphoid progenitor | 1.23e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.48e-40 | 1 |
caecum | 1.48e-40 | 1 |
midgut | 1.48e-40 | 1 |
lower digestive tract | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.21e-40 | 1 |
lymphosarcoma | 2.21e-40 | 1 |
genetic disease | 3.30e-40 | 1 |
monogenic disease | 3.30e-40 | 1 |
xeroderma pigmentosum | 3.30e-40 | 1 |
lymphoma | 2.70e-36 | 10 |
hematologic cancer | 8.20e-08 | 51 |
immune system cancer | 8.20e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.