FFCP PHASE1:Hg19::chr12:7656345..7656356,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9332|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1631|TSSclassifier=S|UniProt=C9JHR8|association_with_transcript=15bp_to_ENST00000396620,ENST00000432237,ENST00000537044_5end|coexpression_cluster_id=C67|description=CAGE_peak_2_at_CD163_5end|id=chr12:7656345..7656356,-|ontology_enrichment_celltype=CL:0002194!6.83e-28!63;CL:0000576!6.83e-28!63;CL:0000040!6.83e-28!63;CL:0000559!6.83e-28!63;CL:0002009!1.51e-26!65;CL:0002057!1.87e-25!42;CL:0000766!4.59e-24!76;CL:0000839!1.55e-23!70;CL:0000557!5.47e-23!71;CL:0000860!6.25e-23!45;CL:0002087!3.88e-12!119;CL:0000763!1.93e-11!112;CL:0000049!1.93e-11!112;CL:0000738!6.91e-10!140;CL:0002031!3.02e-09!124|ontology_enrichment_celltype_v019=CL:0000473;8.77e-30;39!CL:0000234;8.77e-30;39!CL:0000860;1.07e-26;33!CL:0002057;1.07e-26;33!CL:0000576;4.98e-20;48!CL:0000766;3.96e-13;69!CL:0000235;1.84e-11;6!CL:0002619;5.15e-07;3|ontology_enrichment_celltype_v019_2=CL:0000473,6.11e-35,48;CL:0000234,6.11e-35,48;CL:0002194,6.74e-32,59;CL:0000576,6.74e-32,59;CL:0000040,6.74e-32,59;CL:0000559,6.74e-32,59;CL:0002009,1.84e-30,61;CL:0000839,2.97e-27,66;CL:0000766,5.19e-27,72;CL:0000557,1.14e-26,67;CL:0000860,3.69e-26,42;CL:0002057,3.69e-26,42;CL:0000763,4.84e-14,108;CL:0000049,4.84e-14,108;CL:0002087,1.84e-12,115;CL:0000235,1.60e-11,6;CL:0000738,3.08e-10,136;CL:0002031,4.99e-10,120;CL:0002619,5.18e-07,3|ontology_enrichment_development_v019=CL:0002057;4.70e-20;42!UBERON:0004872;5.52e-09;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.56e-67!115;UBERON:0002390!2.64e-24!102;UBERON:0003061!2.64e-24!102;UBERON:0002193!1.54e-22!112;UBERON:0002371!1.06e-18!80;UBERON:0002405!5.24e-18!115;UBERON:0001474!2.25e-16!86;UBERON:0001049!1.85e-14!57;UBERON:0005068!1.85e-14!57;UBERON:0006241!1.85e-14!57;UBERON:0007135!1.85e-14!57;UBERON:0000062!6.49e-14!511;UBERON:0004765!1.67e-12!101;UBERON:0001434!1.67e-12!101;UBERON:0000468!9.42e-12!659;UBERON:0002616!1.42e-11!59;UBERON:0003080!2.62e-11!42;UBERON:0000467!3.03e-11!625;UBERON:0003075!3.07e-11!86;UBERON:0007284!3.07e-11!86;UBERON:0000480!3.72e-11!626;UBERON:0000922!1.66e-10!612;UBERON:0002780!1.79e-10!41;UBERON:0001890!1.79e-10!41;UBERON:0006240!1.79e-10!41;UBERON:0003081!1.80e-10!216;UBERON:0002346!3.17e-10!90;UBERON:0002050!3.25e-10!605;UBERON:0005423!3.25e-10!605;UBERON:0000923!7.20e-10!604;UBERON:0005291!7.20e-10!604;UBERON:0006598!7.20e-10!604;UBERON:0002532!7.20e-10!604;UBERON:0001017!9.84e-10!82;UBERON:0005743!1.42e-09!86;UBERON:0000955!4.28e-09!69;UBERON:0006238!4.28e-09!69;UBERON:0000073!2.68e-08!94;UBERON:0001016!2.68e-08!94;UBERON:0002298!2.69e-08!8;UBERON:0000479!1.06e-07!787;UBERON:0001894!1.37e-07!7;UBERON:0006222!1.37e-07!7;UBERON:0003056!6.80e-07!61|ontology_enrichment_uberon_v019=UBERON:0007023;5.53e-11;114!UBERON:0001894;8.52e-08;7!UBERON:0003296;3.52e-07;4!UBERON:0010133;3.52e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.01e-44,114;UBERON:0002390,6.48e-25,98;UBERON:0003061,6.48e-25,98;UBERON:0002193,1.13e-22,108;UBERON:0002405,2.46e-22,93;UBERON:0002371,4.00e-22,76;UBERON:0001474,1.16e-19,82;UBERON:0004765,6.55e-17,90;UBERON:0003081,1.34e-14,203;UBERON:0001434,4.05e-14,100;UBERON:0000923,3.22e-09,560;UBERON:0010316,3.22e-09,560;UBERON:0005291,3.22e-09,560;UBERON:0006598,3.22e-09,560;UBERON:0010317,3.22e-09,560;UBERON:0002532,3.22e-09,560;UBERON:0002050,5.78e-09,564;UBERON:0005423,5.80e-09,581;UBERON:0000922,9.29e-09,592;UBERON:0000926,1.60e-08,315;UBERON:0004120,1.60e-08,315;UBERON:0006603,1.60e-08,315;UBERON:0001894,8.46e-08,7;UBERON:0006222,8.46e-08,7;UBERON:0003296,3.10e-07,4;UBERON:0010133,3.10e-07,4;UBERON:0002204,4.86e-07,167|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,3.0706351847777,1.54816123316076,0,0,0,0,0,0,2.21598163412751,1.60435557976113,1.08505435357926,314.377325832854,233.851226865703,361.378521390764,1.01778767145695,1.51150377475524,1.69808842831471,1.16214518452842,2.05583944010913,0.929119112685311,3.74000110018796,4.61089271752381,3.54723344832878,1.72372840368309,1.29096936716765,0,1.88242339542605,1.36453075028923,1.34834090667051,3.06083892370903,2.24650318953266,0.639337125799041,4.28806690242731,2.79249120670285,2.13112375266347,1.7412554317715,1.13477044938228,0,3.01498398308092,5.73631210262222,2.17188844705117,1.81619850790011,1.10483290796269,0.632924774881769,0,0.425208599930087,0.838634582033504,3.14520167210186,5.10601435661121,2.57160938715328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0,0,0,0,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1631 | |||
|TSSclassifier=S | |||
|UniProt=C9JHR8 | |||
|association_with_transcript=15bp_to_ENST00000396620,ENST00000432237,ENST00000537044_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_2_at_CD163_5end | |||
|id=chr12:7656345..7656356,- | |||
|ontology_enrichment_celltype=CL:0002194!6.83e-28!63;CL:0000576!6.83e-28!63;CL:0000040!6.83e-28!63;CL:0000559!6.83e-28!63;CL:0002009!1.51e-26!65;CL:0002057!1.87e-25!42;CL:0000766!4.59e-24!76;CL:0000839!1.55e-23!70;CL:0000557!5.47e-23!71;CL:0000860!6.25e-23!45;CL:0002087!3.88e-12!119;CL:0000763!1.93e-11!112;CL:0000049!1.93e-11!112;CL:0000738!6.91e-10!140;CL:0002031!3.02e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.77e-30;39!CL:0000234;8.77e-30;39!CL:0000860;1.07e-26;33!CL:0002057;1.07e-26;33!CL:0000576;4.98e-20;48!CL:0000766;3.96e-13;69!CL:0000235;1.84e-11;6!CL:0002619;5.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.11e-35,48;CL:0000234,6.11e-35,48;CL:0002194,6.74e-32,59;CL:0000576,6.74e-32,59;CL:0000040,6.74e-32,59;CL:0000559,6.74e-32,59;CL:0002009,1.84e-30,61;CL:0000839,2.97e-27,66;CL:0000766,5.19e-27,72;CL:0000557,1.14e-26,67;CL:0000860,3.69e-26,42;CL:0002057,3.69e-26,42;CL:0000763,4.84e-14,108;CL:0000049,4.84e-14,108;CL:0002087,1.84e-12,115;CL:0000235,1.60e-11,6;CL:0000738,3.08e-10,136;CL:0002031,4.99e-10,120;CL:0002619,5.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.70e-20;42!UBERON:0004872;5.52e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.56e-67!115;UBERON:0002390!2.64e-24!102;UBERON:0003061!2.64e-24!102;UBERON:0002193!1.54e-22!112;UBERON:0002371!1.06e-18!80;UBERON:0002405!5.24e-18!115;UBERON:0001474!2.25e-16!86;UBERON:0001049!1.85e-14!57;UBERON:0005068!1.85e-14!57;UBERON:0006241!1.85e-14!57;UBERON:0007135!1.85e-14!57;UBERON:0000062!6.49e-14!511;UBERON:0004765!1.67e-12!101;UBERON:0001434!1.67e-12!101;UBERON:0000468!9.42e-12!659;UBERON:0002616!1.42e-11!59;UBERON:0003080!2.62e-11!42;UBERON:0000467!3.03e-11!625;UBERON:0003075!3.07e-11!86;UBERON:0007284!3.07e-11!86;UBERON:0000480!3.72e-11!626;UBERON:0000922!1.66e-10!612;UBERON:0002780!1.79e-10!41;UBERON:0001890!1.79e-10!41;UBERON:0006240!1.79e-10!41;UBERON:0003081!1.80e-10!216;UBERON:0002346!3.17e-10!90;UBERON:0002050!3.25e-10!605;UBERON:0005423!3.25e-10!605;UBERON:0000923!7.20e-10!604;UBERON:0005291!7.20e-10!604;UBERON:0006598!7.20e-10!604;UBERON:0002532!7.20e-10!604;UBERON:0001017!9.84e-10!82;UBERON:0005743!1.42e-09!86;UBERON:0000955!4.28e-09!69;UBERON:0006238!4.28e-09!69;UBERON:0000073!2.68e-08!94;UBERON:0001016!2.68e-08!94;UBERON:0002298!2.69e-08!8;UBERON:0000479!1.06e-07!787;UBERON:0001894!1.37e-07!7;UBERON:0006222!1.37e-07!7;UBERON:0003056!6.80e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.53e-11;114!UBERON:0001894;8.52e-08;7!UBERON:0003296;3.52e-07;4!UBERON:0010133;3.52e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.01e-44,114;UBERON:0002390,6.48e-25,98;UBERON:0003061,6.48e-25,98;UBERON:0002193,1.13e-22,108;UBERON:0002405,2.46e-22,93;UBERON:0002371,4.00e-22,76;UBERON:0001474,1.16e-19,82;UBERON:0004765,6.55e-17,90;UBERON:0003081,1.34e-14,203;UBERON:0001434,4.05e-14,100;UBERON:0000923,3.22e-09,560;UBERON:0010316,3.22e-09,560;UBERON:0005291,3.22e-09,560;UBERON:0006598,3.22e-09,560;UBERON:0010317,3.22e-09,560;UBERON:0002532,3.22e-09,560;UBERON:0002050,5.78e-09,564;UBERON:0005423,5.80e-09,581;UBERON:0000922,9.29e-09,592;UBERON:0000926,1.60e-08,315;UBERON:0004120,1.60e-08,315;UBERON:0006603,1.60e-08,315;UBERON:0001894,8.46e-08,7;UBERON:0006222,8.46e-08,7;UBERON:0003296,3.10e-07,4;UBERON:0010133,3.10e-07,4;UBERON:0002204,4.86e-07,167 | |||
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|short_description=p2@CD163 | |||
}} |
Revision as of 00:29, 11 September 2013
Short description: | p2@CD163 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CD163_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 15bp_to_ENST00000396620, ENST00000432237, ENST00000537044_5end |
EntrezGene: | CD163 |
HGNC: | 1631 |
UniProt: | C9JHR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.11e-35 | 48 |
phagocyte | 6.11e-35 | 48 |
monopoietic cell | 6.74e-32 | 59 |
monocyte | 6.74e-32 | 59 |
monoblast | 6.74e-32 | 59 |
promonocyte | 6.74e-32 | 59 |
macrophage dendritic cell progenitor | 1.84e-30 | 61 |
myeloid lineage restricted progenitor cell | 2.97e-27 | 66 |
myeloid leukocyte | 5.19e-27 | 72 |
granulocyte monocyte progenitor cell | 1.14e-26 | 67 |
classical monocyte | 3.69e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-26 | 42 |
myeloid cell | 4.84e-14 | 108 |
common myeloid progenitor | 4.84e-14 | 108 |
nongranular leukocyte | 1.84e-12 | 115 |
macrophage | 1.60e-11 | 6 |
leukocyte | 3.08e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 4.99e-10 | 120 |
adult endothelial progenitor cell | 5.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.01e-44 | 114 |
hematopoietic system | 6.48e-25 | 98 |
blood island | 6.48e-25 | 98 |
hemolymphoid system | 1.13e-22 | 108 |
immune system | 2.46e-22 | 93 |
bone marrow | 4.00e-22 | 76 |
bone element | 1.16e-19 | 82 |
skeletal element | 6.55e-17 | 90 |
lateral plate mesoderm | 1.34e-14 | 203 |
skeletal system | 4.05e-14 | 100 |
germ layer | 3.22e-09 | 560 |
germ layer / neural crest | 3.22e-09 | 560 |
embryonic tissue | 3.22e-09 | 560 |
presumptive structure | 3.22e-09 | 560 |
germ layer / neural crest derived structure | 3.22e-09 | 560 |
epiblast (generic) | 3.22e-09 | 560 |
embryonic structure | 5.78e-09 | 564 |
developing anatomical structure | 5.80e-09 | 581 |
embryo | 9.29e-09 | 592 |
mesoderm | 1.60e-08 | 315 |
mesoderm-derived structure | 1.60e-08 | 315 |
presumptive mesoderm | 1.60e-08 | 315 |
diencephalon | 8.46e-08 | 7 |
future diencephalon | 8.46e-08 | 7 |
gland of diencephalon | 3.10e-07 | 4 |
neuroendocrine gland | 3.10e-07 | 4 |
musculoskeletal system | 4.86e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.