FFCP PHASE1:Hg19::chr12:7244222..7244240,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=715|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=1246|TSSclassifier=S|UniProt=|association_with_transcript=35bp_to_AB590488,EU832834,GQ129229_5end|coexpression_cluster_id=C424|description=CAGE_peak_8_at_C1R_5end|id=chr12:7244222..7244240,-|ontology_enrichment_celltype=CL:0000055!6.78e-11!180;CL:0000057!9.15e-10!75;CL:0000680!7.53e-07!57;CL:0000056!7.53e-07!57;CL:0000355!7.53e-07!57|ontology_enrichment_celltype_v019=CL:0000136;1.18e-10;13!CL:0000499;6.99e-08;28!CL:0000135;6.38e-07;3!CL:0000388;6.38e-07;3!CL:0002615;8.16e-07;3|ontology_enrichment_celltype_v019_2=CL:0000136,2.47e-13,15;CL:0000499,4.93e-08,28;CL:0000135,6.48e-07,3;CL:0000388,6.48e-07,3;CL:0002615,7.40e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001013!6.77e-09!14;UBERON:0005256!1.64e-08!143;UBERON:0002385!3.07e-08!63;UBERON:0001015!3.07e-08!63;UBERON:0000383!3.07e-08!63;UBERON:0007100!3.80e-08!27;UBERON:0007023!4.88e-08!115;UBERON:0000914!1.46e-07!83;UBERON:0002329!1.46e-07!83;UBERON:0003077!1.46e-07!83;UBERON:0003059!1.46e-07!83;UBERON:0007282!1.46e-07!83;UBERON:0009618!1.46e-07!83;UBERON:0007285!1.46e-07!83;UBERON:0001134!1.67e-07!61;UBERON:0002036!1.67e-07!61;UBERON:0003082!1.67e-07!61;UBERON:0002100!3.27e-07!216;UBERON:0000948!5.24e-07!24;UBERON:0005498!5.24e-07!24;UBERON:0004140!5.24e-07!24;UBERON:0009881!5.24e-07!24;UBERON:0004141!5.24e-07!24;UBERON:0003084!5.24e-07!24;UBERON:0007005!5.24e-07!24;UBERON:0004139!5.24e-07!24;UBERON:0004291!5.24e-07!24;UBERON:0000481!5.87e-07!347|ontology_enrichment_uberon_v019=UBERON:0001013;2.21e-09;14!UBERON:0007846;6.38e-07;3!UBERON:0000043;6.38e-07;3!UBERON:0007845;6.38e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.25e-09,14;UBERON:0007846,6.48e-07,3;UBERON:0000043,6.48e-07,3;UBERON:0007845,6.48e-07,3|phase1_expression=1.2717486548939,6.20891519283851,2.81908808191942,8.00586386825043,11.1740273606822,7.85104671690332,2.53299878168311,3.15859936713415,5.22371256399677,0,0,0,0,0.37129905888014,1.98838425436749,1.34465029290355,0,0,0.975865597581014,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,0.255725123687061,0,1.50401373190767,1.73815822752988,0,4.86634870302636,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0.926864265692532,12.0471380714502,1.06400514659507,2.24271040056923,0,0,0.311211035399766,0.538842688278752,0.653847612453835,0.605429710579726,0,0.234321431833797,0,0,0.149448680551801,0,0,0.280901613404497,0,0.122834317311768,0.206651562351531,3.56400857184616,6.42894016124248,0,0,0.168336113954066,0,0,0,0.30648779579902,4.20666564938471,0,0.358779271377724,1.70845911054854,1.27159140695737,0.600182192168805,1.03052529238439,0.772921620136887,0.18611685633159,0.168776332241266,0.68205903612839,1.00973509697646,1.01254888506529,7.59736467048416,1.06502877754984,0.403008392910561,0.339121184620975,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,1.92972281457866,0,1.39310378409594,0,0.236613600079688,0,0,0.330881918197182,0,0,0.134831308160164,0,0,0,0,0,1.47008711385542,13.9430538304014,13.7595810334868,11.2250082269467,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.387815147273333,7.15312891703765,0.845302752556,0,0,0,0,0,0.857867961948885,0.542621605391443,0,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0,2.29723871668228,0,0.289562613335158,0.821905290201534,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.8403723757871,1.00034104211935,0.542530047399471,1.45579603071565,0.713715955188647,0.315404830067869,2.22568688486155,0.601892199455438,6.82222512167955,3.10419213877515,0,0.184369168541703,1.04260337361699,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,2.24528075546459,0.512556597022804,0,0.64341568457443,1.48418066444991,0.154209693802656,0,0.246381468041427,1.03850885836724,0.348631135379878,0,0.200506470303285,0,1.95184561879831,1.45672934405374,4.72047893853927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,3.81251743096572,0,0,0,0,4.82051789532479,0.096670718292122,0.770243085573222,1.22802939780904,0.275673144969061,1.07420244868274,2.17525040871343,0.255679882248303,0.356128142586949,0,0,0,0.2023155617111,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,0,0,0.316379424718726,0.953150969619124,0.511795582622668,1.28381696410176,0.636406495851874,0,0.899362287916574,1.37268514868027,0.942499218765491,0,0,0.42125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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1246 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=35bp_to_AB590488,EU832834,GQ129229_5end | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_8_at_C1R_5end | |||
|id=chr12:7244222..7244240,- | |||
|ontology_enrichment_celltype=CL:0000055!6.78e-11!180;CL:0000057!9.15e-10!75;CL:0000680!7.53e-07!57;CL:0000056!7.53e-07!57;CL:0000355!7.53e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.18e-10;13!CL:0000499;6.99e-08;28!CL:0000135;6.38e-07;3!CL:0000388;6.38e-07;3!CL:0002615;8.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.47e-13,15;CL:0000499,4.93e-08,28;CL:0000135,6.48e-07,3;CL:0000388,6.48e-07,3;CL:0002615,7.40e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!6.77e-09!14;UBERON:0005256!1.64e-08!143;UBERON:0002385!3.07e-08!63;UBERON:0001015!3.07e-08!63;UBERON:0000383!3.07e-08!63;UBERON:0007100!3.80e-08!27;UBERON:0007023!4.88e-08!115;UBERON:0000914!1.46e-07!83;UBERON:0002329!1.46e-07!83;UBERON:0003077!1.46e-07!83;UBERON:0003059!1.46e-07!83;UBERON:0007282!1.46e-07!83;UBERON:0009618!1.46e-07!83;UBERON:0007285!1.46e-07!83;UBERON:0001134!1.67e-07!61;UBERON:0002036!1.67e-07!61;UBERON:0003082!1.67e-07!61;UBERON:0002100!3.27e-07!216;UBERON:0000948!5.24e-07!24;UBERON:0005498!5.24e-07!24;UBERON:0004140!5.24e-07!24;UBERON:0009881!5.24e-07!24;UBERON:0004141!5.24e-07!24;UBERON:0003084!5.24e-07!24;UBERON:0007005!5.24e-07!24;UBERON:0004139!5.24e-07!24;UBERON:0004291!5.24e-07!24;UBERON:0000481!5.87e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.21e-09;14!UBERON:0007846;6.38e-07;3!UBERON:0000043;6.38e-07;3!UBERON:0007845;6.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.25e-09,14;UBERON:0007846,6.48e-07,3;UBERON:0000043,6.48e-07,3;UBERON:0007845,6.48e-07,3 | |||
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| |||
|short_description=p8@C1R | |||
}} |
Revision as of 00:23, 11 September 2013
Short description: | p8@C1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_C1R_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 35bp_to_AB590488, EU832834, GQ129229_5end |
EntrezGene: | C1R |
HGNC: | 1246 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.47e-13 | 15 |
stromal cell | 4.93e-08 | 28 |
fibrocyte | 6.48e-07 | 3 |
tendon cell | 6.48e-07 | 3 |
adipocyte of omentum tissue | 7.40e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.25e-09 | 14 |
dense regular connective tissue | 6.48e-07 | 3 |
tendon | 6.48e-07 | 3 |
regular connective tissue | 6.48e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.