FFCP PHASE1:Hg19::chr12:7171627..7171662,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=716|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1247|TSSclassifier=N|UniProt=|association_with_transcript=145bp_to_ENST00000463798_5end|coexpression_cluster_id=C424|description=CAGE_peak_4_at_C1S_5end|id=chr12:7171627..7171662,+|ontology_enrichment_celltype=CL:0000057!5.33e-14!75;CL:0000055!6.71e-11!180;CL:0000136!3.49e-08!15;CL:0002334!5.34e-07!12|ontology_enrichment_celltype_v019=CL:0000136;4.06e-11;13!CL:0000499;4.22e-08;28!CL:0000153;5.54e-07;9!CL:0000447;5.54e-07;9!CL:0002615;5.83e-07;3|ontology_enrichment_celltype_v019_2=CL:0000136,1.13e-13,15;CL:0000499,3.36e-08,28;CL:0000153,4.45e-07,9;CL:0000447,4.45e-07,9;CL:0002615,6.28e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!4.12e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!1.78e-08!216;UBERON:0004457!2.23e-07!12;UBERON:0000042!2.23e-07!12;UBERON:0005256!4.70e-07!143;UBERON:0004458!5.61e-07!49;UBERON:0003688!6.34e-07!6;UBERON:0002358!6.34e-07!6;UBERON:0003684!6.34e-07!6;UBERON:0001178!6.34e-07!6|ontology_enrichment_uberon_v019=UBERON:0004457;1.62e-13;9!UBERON:0000042;1.62e-13;9!UBERON:0003688;8.40e-12;6!UBERON:0002358;8.40e-12;6!UBERON:0003684;8.40e-12;6!UBERON:0001178;8.40e-12;6|ontology_enrichment_uberon_v019_2=UBERON:0004457,7.12e-12,12;UBERON:0000042,7.12e-12,12;UBERON:0003688,7.74e-12,6;UBERON:0002358,7.74e-12,6;UBERON:0003684,7.74e-12,6;UBERON:0001178,7.74e-12,6|phase1_expression=8.90224058425727,7.49351833618441,8.45726424575827,4.00293193412522,12.0679495495368,4.36169262050184,2.53299878168311,8.84407822797563,5.48489819219661,0,0,0,0,0,0,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,1.80719576192283,0,3.62116297402059,2.3858578411533,2.91980922181582,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,2.15271869829786,0.397227542439656,19.5048902109193,2.4826786753885,0,0,0.24666754841716,0.622422070799533,0.538842688278752,0.490385709340376,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.298897361103602,0,0,0,0.204154171254893,0,0.309977343527296,9.50402285825643,9.39614331258516,0.910161361938026,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,4.35690370829131,0.113432183160021,0,1.92201649936711,1.90738711043606,0.300091096084402,1.64884046781502,0.257640540045629,0.37223371266318,0,0.292311015483596,0,1.65689817556139,7.75901072730297,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.55146986366197,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,22.8159062679296,16.7080626835196,10.0434284135839,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,1.32969058292435,1.04007436911366,0,0,0,1.28680194292333,0,0,0,0.355391948742546,0,6.93310567237048,0.871533458600294,2.89921674427965,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,1.03985430765404,1.60586089917446,0.946214490203608,0.937131319941706,0,22.7407504055985,2.0694614258501,0,0,1.99832313276591,0.195801157462741,0,0,0,0,0,0,0,2.23297027036899,0.460385919864187,1.96462066103151,4.86928767171664,7.16390148693385,2.89537058058494,0,0.308419387605311,1.42049380250502,0.98552587216571,0.519254429183621,0.348631135379878,0,0.40101294060657,0,2.64073230778596,1.45672934405374,12.063446176267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,7.52199385028373,0,0,0,0,9.64103579064957,0.870036464629098,0.154048617114644,0.460511024178389,0.137836572484531,0.107420244868274,0.580066775656914,0.170453254832202,0.623224249527161,0.165284915360978,0,0,0.2023155617111,0,3.77774816196768,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0.636406495851874,0,0.539617372749944,0.823611089208164,0.353437207037059,0,0,0,0,2.92456187557541,3.16950440270266,1.50149902548784,5.5148118461948,1.13008116620243,0,1.32687795048244,0.876901770507525,0,0.655894752046633,0,0.6196469961995,0,0,0,0,0.354761064070598,11.1887046707762,8.23237232399755,0,0,0,0,0,7.06078505825844,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56731081233197,0,0,0,0,0.593929361665277,0,0,0,0.111308705022906,0,0.211125408127993,0.398495976502139,1.65770349318689,0,0,0,1.24415835064723,0,0.179021174675609,0,1.57829449019094,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,1.76985594558733,0.91153644677601,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1247 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=145bp_to_ENST00000463798_5end | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_4_at_C1S_5end | |||
|id=chr12:7171627..7171662,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.33e-14!75;CL:0000055!6.71e-11!180;CL:0000136!3.49e-08!15;CL:0002334!5.34e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.06e-11;13!CL:0000499;4.22e-08;28!CL:0000153;5.54e-07;9!CL:0000447;5.54e-07;9!CL:0002615;5.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.13e-13,15;CL:0000499,3.36e-08,28;CL:0000153,4.45e-07,9;CL:0000447,4.45e-07,9;CL:0002615,6.28e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.12e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.78e-08!216;UBERON:0004457!2.23e-07!12;UBERON:0000042!2.23e-07!12;UBERON:0005256!4.70e-07!143;UBERON:0004458!5.61e-07!49;UBERON:0003688!6.34e-07!6;UBERON:0002358!6.34e-07!6;UBERON:0003684!6.34e-07!6;UBERON:0001178!6.34e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.62e-13;9!UBERON:0000042;1.62e-13;9!UBERON:0003688;8.40e-12;6!UBERON:0002358;8.40e-12;6!UBERON:0003684;8.40e-12;6!UBERON:0001178;8.40e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,7.12e-12,12;UBERON:0000042,7.12e-12,12;UBERON:0003688,7.74e-12,6;UBERON:0002358,7.74e-12,6;UBERON:0003684,7.74e-12,6;UBERON:0001178,7.74e-12,6 | |||
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| |||
|short_description=p4@C1S | |||
}} |
Revision as of 00:20, 11 September 2013
Short description: | p4@C1S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_C1S_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 145bp_to_ENST00000463798_5end |
EntrezGene: | C1S |
HGNC: | 1247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.13e-13 | 15 |
stromal cell | 3.36e-08 | 28 |
GAG secreting cell | 4.45e-07 | 9 |
carbohydrate secreting cell | 4.45e-07 | 9 |
adipocyte of omentum tissue | 6.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 7.12e-12 | 12 |
serous membrane | 7.12e-12 | 12 |
omentum | 7.74e-12 | 6 |
peritoneum | 7.74e-12 | 6 |
abdominal cavity | 7.74e-12 | 6 |
visceral peritoneum | 7.74e-12 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.