FFCP PHASE1:Hg19::chr12:56349969..56349984,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6490|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10880|TSSclassifier=N|UniProt=|association_with_transcript=338bp_to_ENST00000550762_5end|coexpression_cluster_id=C83|description=CAGE_peak_11_at_PMEL_5end|id=chr12:56349969..56349984,-|ontology_enrichment_celltype=CL:0000147!9.50e-33!14;CL:0000148!1.52e-28!10;CL:0000541!1.52e-28!10;CL:0002567!1.23e-18!3;CL:0000710!7.93e-14!20;CL:0000149!9.05e-14!4;CL:0000039!1.02e-13!7;CL:0000586!1.02e-13!7;CL:0002536!3.23e-12!2;CL:0002537!3.31e-11!5;CL:0000325!8.76e-11!39;CL:0000075!5.29e-10!27;CL:0002586!1.56e-08!3;CL:0002077!5.13e-08!33;CL:0002566!3.20e-07!1;CL:0000083!9.21e-07!4|ontology_enrichment_celltype_v019=CL:0000148;1.43e-50;10!CL:0000147;4.06e-36;14!CL:0000710;2.95e-25;20!CL:0002567;4.88e-20;3!CL:0000039;6.11e-19;7!CL:0000586;6.11e-19;7!CL:0000075;1.14e-18;27!CL:0002566;2.75e-15;1!CL:0002077;1.24e-12;34!CL:0002253;2.67e-08;2|ontology_enrichment_celltype_v019_2=CL:0000148,1.93e-50,10;CL:0000541,1.93e-50,10;CL:0000147,5.03e-36,14;CL:0000710,3.42e-25,20;CL:0002567,5.37e-20,3;CL:0000039,5.57e-19,7;CL:0000586,5.57e-19,7;CL:0000075,1.27e-18,27;CL:0002566,3.66e-15,1;CL:0002077,9.53e-15,34;CL:0000333,1.31e-11,41;CL:0002253,2.48e-08,2;CL:0000133,4.25e-08,59|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1909!6.32e-13!2;DOID:1799!1.65e-07!1;DOID:10165!1.65e-07!1;DOID:1798!1.65e-07!1;DOID:178!2.84e-07!1;DOID:326!2.84e-07!1;DOID:3978!2.84e-07!1;DOID:3394!2.84e-07!1;DOID:5844!2.84e-07!1;DOID:1793!9.21e-07!4|ontology_enrichment_disease_v019=DOID:1799;7.46e-16;1!DOID:10165;7.46e-16;1!DOID:1798;7.46e-16;1!DOID:178;2.75e-15;1!DOID:326;2.75e-15;1!DOID:3978;2.75e-15;1!DOID:3394;2.75e-15;1!DOID:5844;2.75e-15;1!DOID:1909;1.55e-08;2!DOID:114;2.67e-08;2|ontology_enrichment_disease_v019_2=DOID:1799,7.46e-16,1;DOID:10165,7.46e-16,1;DOID:1798,7.46e-16,1;DOID:178,2.75e-15,1;DOID:326,2.75e-15,1;DOID:3978,2.75e-15,1;DOID:3394,2.75e-15,1;DOID:5844,2.75e-15,1;DOID:1909,1.61e-08,2;DOID:114,2.67e-08,2|ontology_enrichment_uberon=UBERON:0000305!1.65e-20!7;UBERON:0004871!6.33e-18!8;UBERON:0005631!2.52e-14!14;UBERON:0000158!2.52e-14!14;UBERON:0000966!7.29e-11!5;UBERON:0005388!7.29e-11!5;UBERON:0001802!7.29e-11!5;UBERON:0001781!1.56e-08!3;UBERON:0001782!1.56e-08!3;UBERON:0005424!1.56e-08!3;UBERON:0004923!2.87e-08!57;UBERON:0000478!4.02e-08!24|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52394946301206,0.763976851116555,2.34434894420094,3.4214489204541,1.54241239054985,5.70651809903443,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,2.96964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84451123510448,14.0919501723342,2.60753692612819,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,1.59743200399193,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,3.14011866899464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19050711170276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p11@PMEL}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10880 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=338bp_to_ENST00000550762_5end | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_11_at_PMEL_5end | |||
|id=chr12:56349969..56349984,- | |||
|ontology_enrichment_celltype=CL:0000147!9.50e-33!14;CL:0000148!1.52e-28!10;CL:0000541!1.52e-28!10;CL:0002567!1.23e-18!3;CL:0000710!7.93e-14!20;CL:0000149!9.05e-14!4;CL:0000039!1.02e-13!7;CL:0000586!1.02e-13!7;CL:0002536!3.23e-12!2;CL:0002537!3.31e-11!5;CL:0000325!8.76e-11!39;CL:0000075!5.29e-10!27;CL:0002586!1.56e-08!3;CL:0002077!5.13e-08!33;CL:0002566!3.20e-07!1;CL:0000083!9.21e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.43e-50;10!CL:0000147;4.06e-36;14!CL:0000710;2.95e-25;20!CL:0002567;4.88e-20;3!CL:0000039;6.11e-19;7!CL:0000586;6.11e-19;7!CL:0000075;1.14e-18;27!CL:0002566;2.75e-15;1!CL:0002077;1.24e-12;34!CL:0002253;2.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.93e-50,10;CL:0000541,1.93e-50,10;CL:0000147,5.03e-36,14;CL:0000710,3.42e-25,20;CL:0002567,5.37e-20,3;CL:0000039,5.57e-19,7;CL:0000586,5.57e-19,7;CL:0000075,1.27e-18,27;CL:0002566,3.66e-15,1;CL:0002077,9.53e-15,34;CL:0000333,1.31e-11,41;CL:0002253,2.48e-08,2;CL:0000133,4.25e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!6.32e-13!2;DOID:1799!1.65e-07!1;DOID:10165!1.65e-07!1;DOID:1798!1.65e-07!1;DOID:178!2.84e-07!1;DOID:326!2.84e-07!1;DOID:3978!2.84e-07!1;DOID:3394!2.84e-07!1;DOID:5844!2.84e-07!1;DOID:1793!9.21e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1799;7.46e-16;1!DOID:10165;7.46e-16;1!DOID:1798;7.46e-16;1!DOID:178;2.75e-15;1!DOID:326;2.75e-15;1!DOID:3978;2.75e-15;1!DOID:3394;2.75e-15;1!DOID:5844;2.75e-15;1!DOID:1909;1.55e-08;2!DOID:114;2.67e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,7.46e-16,1;DOID:10165,7.46e-16,1;DOID:1798,7.46e-16,1;DOID:178,2.75e-15,1;DOID:326,2.75e-15,1;DOID:3978,2.75e-15,1;DOID:3394,2.75e-15,1;DOID:5844,2.75e-15,1;DOID:1909,1.61e-08,2;DOID:114,2.67e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000305!1.65e-20!7;UBERON:0004871!6.33e-18!8;UBERON:0005631!2.52e-14!14;UBERON:0000158!2.52e-14!14;UBERON:0000966!7.29e-11!5;UBERON:0005388!7.29e-11!5;UBERON:0001802!7.29e-11!5;UBERON:0001781!1.56e-08!3;UBERON:0001782!1.56e-08!3;UBERON:0005424!1.56e-08!3;UBERON:0004923!2.87e-08!57;UBERON:0000478!4.02e-08!24 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52394946301206,0.763976851116555,2.34434894420094,3.4214489204541,1.54241239054985,5.70651809903443,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,2.96964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84451123510448,14.0919501723342,2.60753692612819,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,1.59743200399193,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,3.14011866899464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19050711170276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@PMEL | |||
}} |
Revision as of 23:29, 10 September 2013
Short description: | p11@PMEL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PMEL_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | 338bp_to_ENST00000550762_5end |
EntrezGene: | PMEL |
HGNC: | 10880 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.93e-50 | 10 |
melanoblast | 1.93e-50 | 10 |
pigment cell | 5.03e-36 | 14 |
neurecto-epithelial cell | 3.42e-25 | 20 |
light melanocyte | 5.37e-20 | 3 |
germ line cell | 5.57e-19 | 7 |
germ cell | 5.57e-19 | 7 |
columnar/cuboidal epithelial cell | 1.27e-18 | 27 |
dark melanocyte | 3.66e-15 | 1 |
ecto-epithelial cell | 9.53e-15 | 34 |
migratory neural crest cell | 1.31e-11 | 41 |
epithelial cell of large intestine | 2.48e-08 | 2 |
neurectodermal cell | 4.25e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.46e-16 | 1 |
endocrine pancreas cancer | 7.46e-16 | 1 |
pancreatic endocrine carcinoma | 7.46e-16 | 1 |
vascular disease | 2.75e-15 | 1 |
ischemia | 2.75e-15 | 1 |
extrinsic cardiomyopathy | 2.75e-15 | 1 |
myocardial ischemia | 2.75e-15 | 1 |
myocardial infarction | 2.75e-15 | 1 |
melanoma | 1.61e-08 | 2 |
heart disease | 2.67e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.