FFCP PHASE1:Hg19::chr12:56101647..56101699,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3679|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6143|TSSclassifier=S|UniProt=Q13683,Q4LE35|association_with_transcript=0bp_to_ENST00000257879,ENST00000257880,ENST00000347027,ENST00000353687,ENST00000394229,ENST00000394230,NM_001144996,NM_002206,uc001shg.2,uc001shh.2_5end|description=CAGE_peak_1_at_ITGA7_5end|id=chr12:56101647..56101699,-|ontology_enrichment_celltype=CL:0000055!3.69e-08!180|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.58e-30!115;UBERON:0003075!1.57e-22!86;UBERON:0007284!1.57e-22!86;UBERON:0002346!2.25e-22!90;UBERON:0005743!1.32e-21!86;UBERON:0000073!3.52e-21!94;UBERON:0001016!3.52e-21!94;UBERON:0001017!1.32e-19!82;UBERON:0001049!3.55e-19!57;UBERON:0005068!3.55e-19!57;UBERON:0006241!3.55e-19!57;UBERON:0007135!3.55e-19!57;UBERON:0002616!4.07e-17!59;UBERON:0003056!2.19e-15!61;UBERON:0000924!5.49e-15!173;UBERON:0006601!5.49e-15!173;UBERON:0004121!8.20e-15!169;UBERON:0000955!1.32e-14!69;UBERON:0006238!1.32e-14!69;UBERON:0000153!2.19e-14!129;UBERON:0007811!2.19e-14!129;UBERON:0000033!2.26e-14!123;UBERON:0003080!5.51e-14!42;UBERON:0002780!2.12e-13!41;UBERON:0001890!2.12e-13!41;UBERON:0006240!2.12e-13!41;UBERON:0000468!1.97e-12!659;UBERON:0002020!2.89e-12!34;UBERON:0003528!2.89e-12!34;UBERON:0000475!3.27e-12!365;UBERON:0001893!3.38e-12!34;UBERON:0002791!6.56e-12!33;UBERON:0001869!1.54e-11!32;UBERON:0000922!5.56e-11!612;UBERON:0000481!1.48e-10!347;UBERON:0000062!7.76e-10!511;UBERON:0000956!2.71e-09!25;UBERON:0000203!2.71e-09!25;UBERON:0000467!2.71e-09!625;UBERON:0000480!4.20e-09!626;UBERON:0002050!6.09e-09!605;UBERON:0005423!6.09e-09!605;UBERON:0000923!1.11e-08!604;UBERON:0005291!1.11e-08!604;UBERON:0006598!1.11e-08!604;UBERON:0002532!1.11e-08!604;UBERON:0000483!5.09e-08!309;UBERON:0002619!6.91e-08!22;UBERON:0000119!1.33e-07!312;UBERON:0001950!5.66e-07!20|ontology_enrichment_uberon_v019=UBERON:0003528;2.27e-12;34!UBERON:0002020;2.27e-12;34!UBERON:0001893;2.40e-12;34!UBERON:0001869;3.03e-12;32!UBERON:0002791;3.22e-12;32!UBERON:0000073;1.02e-11;53!UBERON:0002616;1.02e-11;53!UBERON:0002780;1.92e-11;41!UBERON:0001890;1.92e-11;41!UBERON:0000956;1.11e-10;25!UBERON:0000203;1.11e-10;25!UBERON:0001134;1.76e-10;16!UBERON:0002036;1.76e-10;16!UBERON:0007023;2.61e-09;114!UBERON:0002619;4.84e-09;22!UBERON:0001950;5.94e-08;20!UBERON:0001017;2.77e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.32e-35,114;UBERON:0003075,1.47e-24,82;UBERON:0007284,1.47e-24,82;UBERON:0002346,1.33e-23,86;UBERON:0001049,1.18e-21,56;UBERON:0005068,1.18e-21,56;UBERON:0006241,1.18e-21,56;UBERON:0007135,1.18e-21,56;UBERON:0010314,1.69e-21,132;UBERON:0000073,4.25e-20,53;UBERON:0002616,4.25e-20,53;UBERON:0001017,5.29e-20,81;UBERON:0001016,7.98e-19,89;UBERON:0010371,7.46e-18,104;UBERON:0003056,5.01e-17,61;UBERON:0004121,7.66e-17,171;UBERON:0000924,7.66e-17,171;UBERON:0006601,7.66e-17,171;UBERON:0002780,1.52e-15,41;UBERON:0001890,1.52e-15,41;UBERON:0003080,1.52e-15,41;UBERON:0006240,1.52e-15,41;UBERON:0000955,2.44e-14,68;UBERON:0006238,2.44e-14,68;UBERON:0003528,3.35e-14,34;UBERON:0002020,3.35e-14,34;UBERON:0001893,4.02e-14,34;UBERON:0001869,2.41e-13,32;UBERON:0002791,2.70e-13,32;UBERON:0000956,1.08e-10,25;UBERON:0000203,1.08e-10,25;UBERON:0002619,4.92e-09,22;UBERON:0001950,5.87e-08,20;UBERON:0011216,8.49e-08,223;UBERON:0000483,1.85e-07,306;UBERON:0003076,2.21e-07,15;UBERON:0003057,2.21e-07,15;UBERON:0000119,4.66e-07,309;UBERON:0000922,8.78e-07,592|phase1_expression=0.908391896352783,7.27941781229343,4.51054093107108,1.0007329835313,7.15137751083661,2.61701557230111,22.796989035148,12.6343974685366,49.1028981015696,0,0,0,0,8.78741106016331,7.62213964174206,0,0,0,0,3.20114750999649,2.65200898617529,7.52291331547411,18.6053391635187,17.5199264093292,7.78364365487777,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0.671746422719773,0,0,1.45398238779565,0.377875943688809,0.485168122375632,0.929716147622738,0.822335776043652,0.619412741790207,0.28769239232215,0.512321413058201,0,0.689491361473237,0.645484683583826,0,1.31769637679823,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0.580418477257168,0,0,1.7587406567972,0.521482918420201,0.868755378820466,0.605399502633369,0,0,0.211255286311942,0.637812899895131,0.209658645508376,0,0,0,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,12.1903433156981,0.670700859703636,0.511450247374121,0.722878304769133,13.0347856765331,3.18662341713812,0,1.45990461090791,14.1802225746102,7.76052891118974,9.31048728347136,5.6975897841505,0,0,0,0,0,0,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6143 | |||
|TSSclassifier=S | |||
|UniProt=Q13683,Q4LE35 | |||
|association_with_transcript=0bp_to_ENST00000257879,ENST00000257880,ENST00000347027,ENST00000353687,ENST00000394229,ENST00000394230,NM_001144996,NM_002206,uc001shg.2,uc001shh.2_5end | |||
|description=CAGE_peak_1_at_ITGA7_5end | |||
|id=chr12:56101647..56101699,- | |||
|ontology_enrichment_celltype=CL:0000055!3.69e-08!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.58e-30!115;UBERON:0003075!1.57e-22!86;UBERON:0007284!1.57e-22!86;UBERON:0002346!2.25e-22!90;UBERON:0005743!1.32e-21!86;UBERON:0000073!3.52e-21!94;UBERON:0001016!3.52e-21!94;UBERON:0001017!1.32e-19!82;UBERON:0001049!3.55e-19!57;UBERON:0005068!3.55e-19!57;UBERON:0006241!3.55e-19!57;UBERON:0007135!3.55e-19!57;UBERON:0002616!4.07e-17!59;UBERON:0003056!2.19e-15!61;UBERON:0000924!5.49e-15!173;UBERON:0006601!5.49e-15!173;UBERON:0004121!8.20e-15!169;UBERON:0000955!1.32e-14!69;UBERON:0006238!1.32e-14!69;UBERON:0000153!2.19e-14!129;UBERON:0007811!2.19e-14!129;UBERON:0000033!2.26e-14!123;UBERON:0003080!5.51e-14!42;UBERON:0002780!2.12e-13!41;UBERON:0001890!2.12e-13!41;UBERON:0006240!2.12e-13!41;UBERON:0000468!1.97e-12!659;UBERON:0002020!2.89e-12!34;UBERON:0003528!2.89e-12!34;UBERON:0000475!3.27e-12!365;UBERON:0001893!3.38e-12!34;UBERON:0002791!6.56e-12!33;UBERON:0001869!1.54e-11!32;UBERON:0000922!5.56e-11!612;UBERON:0000481!1.48e-10!347;UBERON:0000062!7.76e-10!511;UBERON:0000956!2.71e-09!25;UBERON:0000203!2.71e-09!25;UBERON:0000467!2.71e-09!625;UBERON:0000480!4.20e-09!626;UBERON:0002050!6.09e-09!605;UBERON:0005423!6.09e-09!605;UBERON:0000923!1.11e-08!604;UBERON:0005291!1.11e-08!604;UBERON:0006598!1.11e-08!604;UBERON:0002532!1.11e-08!604;UBERON:0000483!5.09e-08!309;UBERON:0002619!6.91e-08!22;UBERON:0000119!1.33e-07!312;UBERON:0001950!5.66e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.27e-12;34!UBERON:0002020;2.27e-12;34!UBERON:0001893;2.40e-12;34!UBERON:0001869;3.03e-12;32!UBERON:0002791;3.22e-12;32!UBERON:0000073;1.02e-11;53!UBERON:0002616;1.02e-11;53!UBERON:0002780;1.92e-11;41!UBERON:0001890;1.92e-11;41!UBERON:0000956;1.11e-10;25!UBERON:0000203;1.11e-10;25!UBERON:0001134;1.76e-10;16!UBERON:0002036;1.76e-10;16!UBERON:0007023;2.61e-09;114!UBERON:0002619;4.84e-09;22!UBERON:0001950;5.94e-08;20!UBERON:0001017;2.77e-07;75 | |||
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| |||
|short_description=p1@ITGA7 | |||
}} |
Revision as of 23:26, 10 September 2013
Short description: | p1@ITGA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ITGA7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000257879, ENST00000257880, ENST00000347027, ENST00000353687, ENST00000394229, ENST00000394230, NM_001144996, NM_002206, uc001shg.2, uc001shh.2_5end |
EntrezGene: | ITGA7 |
HGNC: | 6143 |
UniProt: | Q13683Q4LE35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.