FFCP PHASE1:Hg19::chr12:47473475..47473484,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=347902|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24073|TSSclassifier=S|UniProt=|association_with_transcript=-50bp_to_ENST00000550413_5end|coexpression_cluster_id=C893|description=CAGE_peak_9_at_AMIGO2_5end|id=chr12:47473475..47473484,-|ontology_enrichment_celltype=CL:0002076!2.04e-09!43;CL:0000066!2.31e-09!254;CL:0000223!4.02e-07!59|ontology_enrichment_celltype_v019=CL:0000244;5.04e-08;4!CL:0000731;5.04e-08;4!CL:0002076;9.92e-07;42|ontology_enrichment_celltype_v019_2=CL:0000244,2.35e-08,4;CL:0000731,2.35e-08,4;CL:0002076,3.65e-07,42;CL:0000066,4.22e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:120!1.42e-11!27;DOID:193!1.70e-11!29;DOID:2394!2.11e-08!14;DOID:1749!1.43e-07!14|ontology_enrichment_disease_v019=DOID:2394;4.23e-14;14!DOID:120;2.07e-10;27!DOID:193;1.49e-09;29!DOID:4929;7.70e-08;2|ontology_enrichment_disease_v019_2=DOID:2394,3.53e-14,14;DOID:120,1.80e-10,27;DOID:193,1.31e-09,29;DOID:4929,1.46e-07,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000992;9.40e-09;13|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.31e-08,13;UBERON:0000365,9.47e-07,5|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,1.46062018077475,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.255725123687061,0,0,0,0.795285947051099,0,0.189069634328136,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.662045904066094,0,0,0.560677600142307,0,1.72667283892012,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.453728732640084,0.179389635688862,0,0,0.900273288253207,0.206105058476878,2.06112432036503,0.18611685633159,0,0.292311015483596,0,0.184099797284599,0,0.355009592516614,0.705264687593482,0.169560592310488,1.54608682530637,2.18196896472668,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,1.1240175325762,0,0.370353780634118,0,0,0,0.115930404975077,1.17408694235822,0,0,0,2.37061319387782,0,0,0,0,0.93733833986777,2.18376766658517,0.850650583454319,0.268675568108545,0.581267877027924,0,0.492663237895943,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0,5.8172272091,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.899756920638513,0,0,0,2.63587341040741,1.14861935834114,0,0.144781306667579,0.205476322550383,0.358121926479791,0.112085143993527,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,2.27407504055985,0,1.32845119707087,0.921845842708516,0.173767228936166,0,0,0.206768026122887,0,0,0,0,0,0.496215615637554,1.07423381301644,0.561320188866147,0.512556597022804,1.02341449813341,0.64341568457443,0,0,0,0,0,0,0,3.40860999515584,0.184161977871793,0,0,0,0.451199612907412,1.38627606787947,0,0,1.37217117560738,0,0,0.647747748306418,0,1.62567862526312,0,0,1.66215201785745,0.447749509444357,0,0,0,0,2.27764876265012,0.103041011647722,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,1.32227932288782,2.49847087574638,1.14851441245126,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0.869932992075073,0.18532421910392,1.71749864090389,0,0.316379424718726,0,0,0,0,0.78494864019923,0.359744915166629,0,0,0,0,0.421258456238981,0,0,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0.294747123039363,0,0,0,0,0,0,0,0,1.08890984861323,0,1.72202149068492,1.68471475667626,0.886860307073351,3.21612760289743,0.507447609232169,0,0,0,0,0,0,0,1.28188885352968,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0.398495976502139,0.276283915531148,0,1.02268682502155,0,0,1.70749867179921,0.895105873378046,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.7812832832557,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,0,0.278847488557207,0.153900517007594,0.341826167541004,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0.632994193584081,1.30586246527318,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,1.32930774541437,0.6619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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=347902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24073 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-50bp_to_ENST00000550413_5end | |||
|coexpression_cluster_id=C893 | |||
|description=CAGE_peak_9_at_AMIGO2_5end | |||
|id=chr12:47473475..47473484,- | |||
|ontology_enrichment_celltype=CL:0002076!2.04e-09!43;CL:0000066!2.31e-09!254;CL:0000223!4.02e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000244;5.04e-08;4!CL:0000731;5.04e-08;4!CL:0002076;9.92e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.35e-08,4;CL:0000731,2.35e-08,4;CL:0002076,3.65e-07,42;CL:0000066,4.22e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.42e-11!27;DOID:193!1.70e-11!29;DOID:2394!2.11e-08!14;DOID:1749!1.43e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.23e-14;14!DOID:120;2.07e-10;27!DOID:193;1.49e-09;29!DOID:4929;7.70e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.53e-14,14;DOID:120,1.80e-10,27;DOID:193,1.31e-09,29;DOID:4929,1.46e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;9.40e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.31e-08,13;UBERON:0000365,9.47e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,1.46062018077475,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.255725123687061,0,0,0,0.795285947051099,0,0.189069634328136,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.662045904066094,0,0,0.560677600142307,0,1.72667283892012,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.453728732640084,0.179389635688862,0,0,0.900273288253207,0.206105058476878,2.06112432036503,0.18611685633159,0,0.292311015483596,0,0.184099797284599,0,0.355009592516614,0.705264687593482,0.169560592310488,1.54608682530637,2.18196896472668,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,1.1240175325762,0,0.370353780634118,0,0,0,0.115930404975077,1.17408694235822,0,0,0,2.37061319387782,0,0,0,0,0.93733833986777,2.18376766658517,0.850650583454319,0.268675568108545,0.581267877027924,0,0.492663237895943,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0,5.8172272091,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.899756920638513,0,0,0,2.63587341040741,1.14861935834114,0,0.144781306667579,0.205476322550383,0.358121926479791,0.112085143993527,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,2.27407504055985,0,1.32845119707087,0.921845842708516,0.173767228936166,0,0,0.206768026122887,0,0,0,0,0,0.496215615637554,1.07423381301644,0.561320188866147,0.512556597022804,1.02341449813341,0.64341568457443,0,0,0,0,0,0,0,3.40860999515584,0.184161977871793,0,0,0,0.451199612907412,1.38627606787947,0,0,1.37217117560738,0,0,0.647747748306418,0,1.62567862526312,0,0,1.66215201785745,0.447749509444357,0,0,0,0,2.27764876265012,0.103041011647722,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,1.32227932288782,2.49847087574638,1.14851441245126,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0.869932992075073,0.18532421910392,1.71749864090389,0,0.316379424718726,0,0,0,0,0.78494864019923,0.359744915166629,0,0,0,0,0.421258456238981,0,0,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0.294747123039363,0,0,0,0,0,0,0,0,1.08890984861323,0,1.72202149068492,1.68471475667626,0.886860307073351,3.21612760289743,0.507447609232169,0,0,0,0,0,0,0,1.28188885352968,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0.398495976502139,0.276283915531148,0,1.02268682502155,0,0,1.70749867179921,0.895105873378046,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.7812832832557,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,0,0.278847488557207,0.153900517007594,0.341826167541004,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0.632994193584081,1.30586246527318,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,1.32930774541437,0.661983911750998,2.19753042885058,0,2.84609546029793,0.554698692052555,0.520679215005393,0.293977192243133,0.34823682632161,0,0,0,0,0.0821154570532092,0,0,0,1.78154502040776,0,0,0.782205530939212,0.801588202515337,0,0,0.288180834308212,0,0,0.432164393964449,0.248505071130865,0.235694034616795,0,0,0.305994652908965,0.288950589901519,0,0,0,0.859530882839914,0,0,0.458320848023367,0,0,0,0,0,0.720599767084807,0,0,0,0,0.885847333632739,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.262272940674991,0,0,1.53532157855556,0,0,0,0,0,0,0,0.246277562248017,0.681552087141687,0,0,0,0.387848869084652,0.39669780522807,2.56630256826494,0.704815022316672,0,0.157204305099666,0,0,0,0.121792598380896,1.27668251554036,0.544017803369474,0.7520696820681,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0,0,0.332787154610557,0.310482014706917,0,0.874862855734746,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,1.27437413730962,3.14862178514523,0.465788870628778,0,2.12673371646396,1.5652351854352,0.300515217994437,1.90402606084398,0.813741466409323,0.545545977607678,1.18151612746737,2.78420255927096,3.18476710958893,0.800055529326307,0,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| |||
|short_description=p9@AMIGO2 | |||
}} |
Revision as of 22:45, 10 September 2013
Short description: | p9@AMIGO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_AMIGO2_5end |
Coexpression cluster: | C893_osteoclastoma_Urothelial_tubular_nonsmall_Mesenchymal_Renal_hepatic |
Association with transcript: | -50bp_to_ENST00000550413_5end |
EntrezGene: | AMIGO2 |
HGNC: | 24073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.35e-08 | 4 |
urothelial cell | 2.35e-08 | 4 |
endo-epithelial cell | 3.65e-07 | 42 |
epithelial cell | 4.22e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.31e-08 | 13 |
urothelium | 9.47e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.53e-14 | 14 |
female reproductive organ cancer | 1.80e-10 | 27 |
reproductive organ cancer | 1.31e-09 | 29 |
tubular adenocarcinoma | 1.46e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.