FFCP PHASE1:Hg19::chr12:47462010..47462014,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:47462010..47462014,+|id=chr12:47462010..47462014,+|ontology_enrichment_celltype=CL:0002319!1.24e-08!25;CL:0000133!5.51e-08!59|ontology_enrichment_celltype_v019=CL:0000333;1.91e-23;5!CL:0002321;1.68e-08;15!CL:0000243;1.21e-07;15!CL:0000125;1.21e-07;15!CL:0000095;6.19e-07;17|ontology_enrichment_celltype_v019_2=CL:0000333,5.30e-11,41;CL:0000133,6.88e-08,59;CL:0000243,1.25e-07,15;CL:0000125,1.25e-07,15;CL:0000030,1.25e-07,15;CL:0000339,1.25e-07,15;CL:0000095,6.38e-07,17;CL:0000123,6.38e-07,17|ontology_enrichment_development_v019=UBERON:0006238;2.68e-11;10!CL:0000339;1.21e-07;15|ontology_enrichment_disease=DOID:0050687!1.91e-12!143;DOID:162!2.54e-12!235;DOID:14566!7.11e-12!239;DOID:171!1.15e-08!10;DOID:3095!5.71e-07!22;DOID:2994!5.71e-07!22|ontology_enrichment_disease_v019=DOID:3093;8.12e-22;11!DOID:169;9.95e-20;6!DOID:3193;2.55e-15;2!DOID:962;2.55e-15;2!DOID:171;2.90e-12;10!DOID:3095;3.20e-12;22!DOID:2994;3.20e-12;22!DOID:1192;1.14e-10;3|ontology_enrichment_disease_v019_2=DOID:3093,9.03e-22,11;DOID:169,9.49e-20,6;DOID:3193,2.74e-15,2;DOID:962,2.74e-15,2;DOID:171,2.81e-12,10;DOID:3095,3.08e-12,22;DOID:2994,3.08e-12,22;DOID:1192,1.20e-10,3|ontology_enrichment_uberon=UBERON:0000013!3.18e-07!5;UBERON:0002410!3.18e-07!5|ontology_enrichment_uberon_v019=UBERON:0000013;1.91e-23;5!UBERON:0002410;1.91e-23;5!UBERON:0003714;2.55e-15;2!UBERON:0000010;1.63e-13;8|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.81e-23,5;UBERON:0002410,1.81e-23,5;UBERON:0003714,2.74e-15,2;UBERON:0000010,1.58e-13,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,7.32801813480603,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97680046662565,0,0.173559738335131,0,0,0,0,0,0.0730893170861856,0,0,0,0,0.274083849293502,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,2.44627570932505,2.196659772559,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67352101155024,0.436838552768056,0,0.212574920101683,0.247871528518004,1.11728983594649,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.0679697329768317,0,0.236387681767936,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0.23248285073625,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,1.89249637252618,0.327796715891087,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr12:47462010..47462014,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:47462010..47462014,+ | |||
|id=chr12:47462010..47462014,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.24e-08!25;CL:0000133!5.51e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.91e-23;5!CL:0002321;1.68e-08;15!CL:0000243;1.21e-07;15!CL:0000125;1.21e-07;15!CL:0000095;6.19e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,5.30e-11,41;CL:0000133,6.88e-08,59;CL:0000243,1.25e-07,15;CL:0000125,1.25e-07,15;CL:0000030,1.25e-07,15;CL:0000339,1.25e-07,15;CL:0000095,6.38e-07,17;CL:0000123,6.38e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.68e-11;10!CL:0000339;1.21e-07;15 | |||
|ontology_enrichment_disease=DOID:0050687!1.91e-12!143;DOID:162!2.54e-12!235;DOID:14566!7.11e-12!239;DOID:171!1.15e-08!10;DOID:3095!5.71e-07!22;DOID:2994!5.71e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3093;8.12e-22;11!DOID:169;9.95e-20;6!DOID:3193;2.55e-15;2!DOID:962;2.55e-15;2!DOID:171;2.90e-12;10!DOID:3095;3.20e-12;22!DOID:2994;3.20e-12;22!DOID:1192;1.14e-10;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,9.03e-22,11;DOID:169,9.49e-20,6;DOID:3193,2.74e-15,2;DOID:962,2.74e-15,2;DOID:171,2.81e-12,10;DOID:3095,3.08e-12,22;DOID:2994,3.08e-12,22;DOID:1192,1.20e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0000013!3.18e-07!5;UBERON:0002410!3.18e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.91e-23;5!UBERON:0002410;1.91e-23;5!UBERON:0003714;2.55e-15;2!UBERON:0000010;1.63e-13;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.81e-23,5;UBERON:0002410,1.81e-23,5;UBERON:0003714,2.74e-15,2;UBERON:0000010,1.58e-13,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,7.32801813480603,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97680046662565,0,0.173559738335131,0,0,0,0,0,0.0730893170861856,0,0,0,0,0.274083849293502,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,2.44627570932505,2.196659772559,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67352101155024,0.436838552768056,0,0.212574920101683,0.247871528518004,1.11728983594649,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.0679697329768317,0,0.236387681767936,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0.23248285073625,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,1.89249637252618,0.327796715891087,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr12:47462010..47462014,+ | |||
}} |
Revision as of 22:45, 10 September 2013
Short description: | p@chr12:47462010..47462014, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:47462010..47462014, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 5.30e-11 | 41 |
neurectodermal cell | 6.88e-08 | 59 |
glial cell (sensu Vertebrata) | 1.25e-07 | 15 |
glial cell | 1.25e-07 | 15 |
glioblast | 1.25e-07 | 15 |
glioblast (sensu Vertebrata) | 1.25e-07 | 15 |
neuron associated cell | 6.38e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.38e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.81e-23 | 5 |
autonomic nervous system | 1.81e-23 | 5 |
neural tissue | 2.74e-15 | 2 |
peripheral nervous system | 1.58e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 9.03e-22 | 11 |
neuroendocrine tumor | 9.49e-20 | 6 |
peripheral nerve sheath neoplasm | 2.74e-15 | 2 |
neurofibroma | 2.74e-15 | 2 |
neuroectodermal tumor | 2.81e-12 | 10 |
germ cell and embryonal cancer | 3.08e-12 | 22 |
germ cell cancer | 3.08e-12 | 22 |
peripheral nervous system neoplasm | 1.20e-10 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.