FFCP PHASE1:Hg19::chr12:42711630..42711659,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:42711630..42711659,-|id=chr12:42711630..42711659,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000135;2.86e-09;3!CL:0000388;2.86e-09;3!CL:0000785;5.20e-08;1!CL:0000819;5.20e-08;1|ontology_enrichment_celltype_v019_2=CL:0000135,1.89e-09,3;CL:0000388,1.89e-09,3;CL:0000819,5.58e-08,1|ontology_enrichment_development_v019=UBERON:0005425;1.43e-07;1!UBERON:0004874;1.43e-07;1|ontology_enrichment_disease=DOID:14566!6.55e-17!239;DOID:162!2.93e-16!235;DOID:0050687!2.79e-12!143;DOID:305!3.49e-08!106|ontology_enrichment_disease_v019=DOID:0060073;5.20e-08;1!DOID:8675;5.20e-08;1!DOID:3112;1.43e-07;1|ontology_enrichment_disease_v019_2=DOID:0060073,5.58e-08,1;DOID:8675,5.58e-08,1;DOID:3112,1.80e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003714;1.84e-13;2!UBERON:0007846;2.86e-09;3!UBERON:0000043;2.86e-09;3!UBERON:0007845;2.86e-09;3!UBERON:0000989;1.43e-07;1!UBERON:0000941;1.43e-07;1!UBERON:0001785;1.43e-07;1!UBERON:0002464;1.43e-07;1!UBERON:0004904;1.43e-07;1!UBERON:0008811;1.43e-07;1!UBERON:0001021;1.43e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003714,7.61e-14,2;UBERON:0007846,1.89e-09,3;UBERON:0000043,1.89e-09,3;UBERON:0007845,1.89e-09,3;UBERON:0000989,8.84e-08,1;UBERON:0008811,8.84e-08,1;UBERON:0006258,8.84e-08,1;UBERON:0005876,8.84e-08,1;UBERON:0004874,8.84e-08,1;UBERON:0000941,1.01e-07,1;UBERON:0001785,1.01e-07,1;UBERON:0002464,1.01e-07,1;UBERON:0004904,1.01e-07,1;UBERON:0001021,1.01e-07,1;UBERON:0003902,1.01e-07,1;UBERON:0005425,1.01e-07,1|phase1_expression=0.363356758541113,1.2846031433459,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0.376627918784408,0.687720651731561,0.246301768349837,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.205601498999509,0.167186495390678,0.32592226663359,0,1.94826728407911,0.111410456885174,0,0,0,0.128091319725675,0.520237390239513,0.657751618414705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0.283604451492204,0,0.351339142772504,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0,0,0.81014194788176,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0.993943903390637,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0.597794722207204,0.352303495931295,0,0,0,0.122834317311768,0.413303124703062,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0,0.340296549480063,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0.504867548488229,0.184099797284599,0.323292113637624,0,0.201504196455281,0.169560592310488,0.193260853163297,0.272746120590835,0,0.365921118388786,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0.946454400318751,1.01150814046861,0,0.110293972732394,0.217879444092406,0,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.737930631258681,0.171567810298526,0,0,1.00528972411631,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.806026704325635,0,0,0,0.176096868026452,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.2933531432838,0,0,0,0.531876233169741,0,0,0,0,0.714889968290738,0.542621605391443,0,0,0,0,0,0.871533458600294,0.899756920638513,0,1.00451418286425,2.10833939483032,0.239624855491583,1.14861935834114,0,0.434343920002738,0.61642896765115,0.179060963239896,0.896681151948218,0.591092280605782,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,0.207970861530807,0.713715955188647,0.473107245101804,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0.248107807818777,0,0.561320188866147,0.256278298511402,0,0.64341568457443,0,0.462629081407967,0,0.410635780069046,0,0,0.241718899183244,0.200506470303285,0.644566922551274,0.34444334449382,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.211103257785751,0,0.170093705276516,0.86366366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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:42711630..42711659,- | |||
|id=chr12:42711630..42711659,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.86e-09;3!CL:0000388;2.86e-09;3!CL:0000785;5.20e-08;1!CL:0000819;5.20e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.89e-09,3;CL:0000388,1.89e-09,3;CL:0000819,5.58e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.43e-07;1!UBERON:0004874;1.43e-07;1 | |||
|ontology_enrichment_disease=DOID:14566!6.55e-17!239;DOID:162!2.93e-16!235;DOID:0050687!2.79e-12!143;DOID:305!3.49e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.20e-08;1!DOID:8675;5.20e-08;1!DOID:3112;1.43e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.58e-08,1;DOID:8675,5.58e-08,1;DOID:3112,1.80e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;1.84e-13;2!UBERON:0007846;2.86e-09;3!UBERON:0000043;2.86e-09;3!UBERON:0007845;2.86e-09;3!UBERON:0000989;1.43e-07;1!UBERON:0000941;1.43e-07;1!UBERON:0001785;1.43e-07;1!UBERON:0002464;1.43e-07;1!UBERON:0004904;1.43e-07;1!UBERON:0008811;1.43e-07;1!UBERON:0001021;1.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,7.61e-14,2;UBERON:0007846,1.89e-09,3;UBERON:0000043,1.89e-09,3;UBERON:0007845,1.89e-09,3;UBERON:0000989,8.84e-08,1;UBERON:0008811,8.84e-08,1;UBERON:0006258,8.84e-08,1;UBERON:0005876,8.84e-08,1;UBERON:0004874,8.84e-08,1;UBERON:0000941,1.01e-07,1;UBERON:0001785,1.01e-07,1;UBERON:0002464,1.01e-07,1;UBERON:0004904,1.01e-07,1;UBERON:0001021,1.01e-07,1;UBERON:0003902,1.01e-07,1;UBERON:0005425,1.01e-07,1 | |||
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| |||
|short_description=p@chr12:42711630..42711659,- | |||
}} |
Revision as of 22:37, 10 September 2013
Short description: | p@chr12:42711630..42711659, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:42711630..42711659, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.89e-09 | 3 |
tendon cell | 1.89e-09 | 3 |
B-1 B cell | 5.58e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 7.61e-14 | 2 |
dense regular connective tissue | 1.89e-09 | 3 |
tendon | 1.89e-09 | 3 |
regular connective tissue | 1.89e-09 | 3 |
penis | 8.84e-08 | 1 |
intromittent organ | 8.84e-08 | 1 |
lateral plate mesenchyme | 8.84e-08 | 1 |
undifferentiated genital tubercle | 8.84e-08 | 1 |
somatopleure | 8.84e-08 | 1 |
cranial nerve II | 1.01e-07 | 1 |
cranial nerve | 1.01e-07 | 1 |
nerve trunk | 1.01e-07 | 1 |
nerve connecting eye with brain | 1.01e-07 | 1 |
nerve | 1.01e-07 | 1 |
retinal neural layer | 1.01e-07 | 1 |
presumptive neural retina | 1.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.58e-08 | 1 |
lymphosarcoma | 5.58e-08 | 1 |
papillary adenocarcinoma | 1.80e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.