FFCP PHASE1:Hg19::chr12:25102229..25102244,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=586|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=976|TSSclassifier=S|UniProt=|association_with_transcript=63bp_to_uc001rgd.3,uc001rge.3,uc010siy.1_5end|description=CAGE_peak_8_at_BCAT1_5end|id=chr12:25102229..25102244,-|ontology_enrichment_celltype=CL:0000012!1.63e-10!682;CL:0000548!1.02e-09!679;CL:0000004!1.02e-09!679;CL:0000255!1.02e-09!679;CL:0000144!1.83e-09!625;CL:0000034!4.07e-09!444;CL:0000048!4.24e-08!430;CL:0000134!7.18e-08!358;CL:0000219!8.06e-08!390;CL:0000723!1.32e-07!436;CL:0002057!2.28e-07!42;CL:0002320!4.97e-07!365;CL:0000763!6.74e-07!112;CL:0000049!6.74e-07!112|ontology_enrichment_celltype_v019=CL:0000453;9.52e-13;5!CL:0000860;5.55e-12;33!CL:0002057;5.55e-12;33!CL:0000473;1.43e-09;39!CL:0000234;1.43e-09;39!CL:0000451;1.83e-07;10!CL:0000576;3.21e-07;48!CL:0002537;6.90e-07;5!CL:0000990;7.92e-07;8|ontology_enrichment_celltype_v019_2=CL:0000860,2.13e-14,42;CL:0002057,2.13e-14,42;CL:0000473,2.36e-13,48;CL:0000234,2.36e-13,48;CL:0000453,1.10e-12,5;CL:0000988,3.35e-12,177;CL:0002009,9.37e-12,61;CL:0000557,2.64e-11,67;CL:0000738,6.78e-11,136;CL:0002032,8.86e-11,161;CL:0000837,8.86e-11,161;CL:0000037,1.06e-10,168;CL:0000763,1.75e-10,108;CL:0000049,1.75e-10,108;CL:0002031,1.20e-09,120;CL:0002194,1.22e-09,59;CL:0000576,1.22e-09,59;CL:0000040,1.22e-09,59;CL:0000559,1.22e-09,59;CL:0002087,1.49e-08,115;CL:0000839,4.06e-08,66;CL:0000451,1.51e-07,10;CL:0000766,4.63e-07,72;CL:0000990,8.53e-07,8;CL:0002537,9.23e-07,5|ontology_enrichment_development_v019=CL:0002057;3.69e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.56e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.19e-10,98;UBERON:0003061,2.19e-10,98;UBERON:0002371,3.10e-10,76;UBERON:0001474,4.67e-09,82;UBERON:0002193,8.81e-09,108;UBERON:0002405,3.21e-08,93;UBERON:0004765,9.55e-08,90|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,2.90370941842215,3.20192298854788,2.83358812729245,0,0,0.154816123316076,0,0,0,0.542270404062111,0.995184627411951,0.880801318004542,2.21598163412751,1.60435557976113,1.08505435357926,0,0,0,0.290796477559129,0.755751887377619,0,1.39457422143411,1.6446715520873,1.23882548358041,0.28769239232215,0.256160706529101,0.236482229888585,1.72372840368309,1.93645405075148,1.35426486594342,0.564727018627814,1.09162460023138,1.34834090667051,1.83650335422542,2.88836124368484,4.47535988059329,0,0,0.426224750532694,2.03146467040009,3.40431134814684,3.11411124497787,0,0.521482918420201,0.65156653411535,0.605399502633369,2.20966581592539,1.89877432464531,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,1.5905718941022,1.45990461090791,0.378139268656271,1.33037638477538,0.527008714158756,0.130979075497713,0,0,0,0,0,0,1.71598473234038,0,0.198762407366705,0.860234595106124,0,1.13061588384802,0.838998872419812,0.275118041940067,0,0.258416759169329,0,0,0.402829317109147,0,0,0.367663080345869,0,0.446498641420399,0.673588117878509,0.337834441449967,0,0,0.549605231791222,0,0,0,0,0.506522046658319,0.794455084879313,0.286836620748814,0.709336764396714,0,0,0.49333509683432,0,0.538842688278752,0,0.302714855289863,0,0,0.312160076830321,0,0,0.469737994575059,0.161872944368132,0.421352420106746,0,0.122834317311768,0.206651562351531,0,0.494533858557114,0.910161361938026,0,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0.600952235626387,0.453728732640084,0.358779271377724,0.427114777637135,0.423863802319124,0,0,0,0.18611685633159,1.68776332241266,0.389748020644795,0.504867548488229,0.184099797284599,0.161646056818812,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0.487894824518382,0.530119073285941,1.2781333715647,0.414644220061482,1.00928340350251,2.18986415445498,0,0.643240938192885,0,0.464367928031979,0,1.30137480043828,0.505754070234305,0,0.772057809126758,0.653638332277218,0.474541238222193,0.808987848960987,0,0,0,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0.343135620597051,0.109750285408626,0,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0.34779121492523,0.469634776943287,0,0,0,0,0,0.246217006087397,0.702012795417713,0.743155811443641,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.22001485746285,1.29271715757778,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0.710783897485092,0,0.301439377059586,0.871533458600294,0.499864955910285,1.2162378064119,0,0,0.479249710983165,0,0,0.289562613335158,0,0,0.336255431980582,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=63bp_to_uc001rgd.3,uc001rge.3,uc010siy.1_5end | |||
|description=CAGE_peak_8_at_BCAT1_5end | |||
|id=chr12:25102229..25102244,- | |||
|ontology_enrichment_celltype=CL:0000012!1.63e-10!682;CL:0000548!1.02e-09!679;CL:0000004!1.02e-09!679;CL:0000255!1.02e-09!679;CL:0000144!1.83e-09!625;CL:0000034!4.07e-09!444;CL:0000048!4.24e-08!430;CL:0000134!7.18e-08!358;CL:0000219!8.06e-08!390;CL:0000723!1.32e-07!436;CL:0002057!2.28e-07!42;CL:0002320!4.97e-07!365;CL:0000763!6.74e-07!112;CL:0000049!6.74e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000453;9.52e-13;5!CL:0000860;5.55e-12;33!CL:0002057;5.55e-12;33!CL:0000473;1.43e-09;39!CL:0000234;1.43e-09;39!CL:0000451;1.83e-07;10!CL:0000576;3.21e-07;48!CL:0002537;6.90e-07;5!CL:0000990;7.92e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.13e-14,42;CL:0002057,2.13e-14,42;CL:0000473,2.36e-13,48;CL:0000234,2.36e-13,48;CL:0000453,1.10e-12,5;CL:0000988,3.35e-12,177;CL:0002009,9.37e-12,61;CL:0000557,2.64e-11,67;CL:0000738,6.78e-11,136;CL:0002032,8.86e-11,161;CL:0000837,8.86e-11,161;CL:0000037,1.06e-10,168;CL:0000763,1.75e-10,108;CL:0000049,1.75e-10,108;CL:0002031,1.20e-09,120;CL:0002194,1.22e-09,59;CL:0000576,1.22e-09,59;CL:0000040,1.22e-09,59;CL:0000559,1.22e-09,59;CL:0002087,1.49e-08,115;CL:0000839,4.06e-08,66;CL:0000451,1.51e-07,10;CL:0000766,4.63e-07,72;CL:0000990,8.53e-07,8;CL:0002537,9.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.69e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.56e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.19e-10,98;UBERON:0003061,2.19e-10,98;UBERON:0002371,3.10e-10,76;UBERON:0001474,4.67e-09,82;UBERON:0002193,8.81e-09,108;UBERON:0002405,3.21e-08,93;UBERON:0004765,9.55e-08,90 | |||
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| |||
|short_description=p8@BCAT1 | |||
}} |
Revision as of 22:15, 10 September 2013
Short description: | p8@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_BCAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_uc001rgd.3, uc001rge.3, uc010siy.1_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.13e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.13e-14 | 42 |
defensive cell | 2.36e-13 | 48 |
phagocyte | 2.36e-13 | 48 |
Langerhans cell | 1.10e-12 | 5 |
hematopoietic cell | 3.35e-12 | 177 |
macrophage dendritic cell progenitor | 9.37e-12 | 61 |
granulocyte monocyte progenitor cell | 2.64e-11 | 67 |
leukocyte | 6.78e-11 | 136 |
hematopoietic oligopotent progenitor cell | 8.86e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.86e-11 | 161 |
hematopoietic stem cell | 1.06e-10 | 168 |
myeloid cell | 1.75e-10 | 108 |
common myeloid progenitor | 1.75e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 1.20e-09 | 120 |
monopoietic cell | 1.22e-09 | 59 |
monocyte | 1.22e-09 | 59 |
monoblast | 1.22e-09 | 59 |
promonocyte | 1.22e-09 | 59 |
nongranular leukocyte | 1.49e-08 | 115 |
myeloid lineage restricted progenitor cell | 4.06e-08 | 66 |
dendritic cell | 1.51e-07 | 10 |
myeloid leukocyte | 4.63e-07 | 72 |
conventional dendritic cell | 8.53e-07 | 8 |
amnion mesenchymal stem cell | 9.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.19e-10 | 98 |
blood island | 2.19e-10 | 98 |
bone marrow | 3.10e-10 | 76 |
bone element | 4.67e-09 | 82 |
hemolymphoid system | 8.81e-09 | 108 |
immune system | 3.21e-08 | 93 |
skeletal element | 9.55e-08 | 90 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.