FFCP PHASE1:Hg19::chr12:131323719..131323746,-: Difference between revisions
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{{FFCP | 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46388464039779,5.2550469129137,1.30630048738177,0.342233301085281,0.336760265072938,1.57788851863888,1.33064142618405,1.05824249194267,0.747091421144008,3.8614456457388,1.61685363791856,2.34640942403454,3.30051899293739,3.66206560484165,4.66029741929859,1.20764276154616,0|short_description=p2@STX2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2054 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3403 | |||
|TSSclassifier=S | |||
|UniProt=P32856 | |||
|association_with_transcript=0bp_to_ENST00000392373_5end | |||
|description=CAGE_peak_2_at_STX2_5end | |||
|id=chr12:131323719..131323746,- | |||
|ontology_enrichment_celltype=CL:0000055!1.31e-26!180;CL:0000057!7.21e-20!75;CL:0002620!1.96e-09!23;CL:0000680!9.69e-08!57;CL:0000056!9.69e-08!57;CL:0000355!9.69e-08!57;CL:0000222!2.55e-07!119;CL:0000187!4.47e-07!54;CL:0000393!5.27e-07!60;CL:0000211!5.27e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.32e-10;23!CL:0000057;1.94e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.83e-21,76;CL:0002620,1.05e-10,23;CL:0000680,9.49e-08,58;CL:0000056,9.49e-08,58;CL:0000355,9.49e-08,58;CL:0000187,5.40e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.23e-17!365;UBERON:0000119!2.36e-11!312;UBERON:0000483!3.54e-11!309;UBERON:0000481!4.45e-11!347;UBERON:0000477!1.71e-10!286;UBERON:0004111!1.91e-10!241;UBERON:0000914!2.10e-10!83;UBERON:0002329!2.10e-10!83;UBERON:0003077!2.10e-10!83;UBERON:0003059!2.10e-10!83;UBERON:0007282!2.10e-10!83;UBERON:0009618!2.10e-10!83;UBERON:0007285!2.10e-10!83;UBERON:0000025!9.29e-10!194;UBERON:0005743!7.01e-09!86;UBERON:0001017!8.09e-09!82;UBERON:0000468!8.37e-09!659;UBERON:0000073!1.47e-08!94;UBERON:0001016!1.47e-08!94;UBERON:0004290!1.76e-08!70;UBERON:0005256!2.26e-08!143;UBERON:0002346!2.76e-08!90;UBERON:0003075!4.26e-08!86;UBERON:0007284!4.26e-08!86;UBERON:0001049!5.40e-08!57;UBERON:0005068!5.40e-08!57;UBERON:0006241!5.40e-08!57;UBERON:0007135!5.40e-08!57;UBERON:0002100!8.08e-08!216;UBERON:0002385!1.26e-07!63;UBERON:0001015!1.26e-07!63;UBERON:0000383!1.26e-07!63;UBERON:0002616!1.49e-07!59;UBERON:0001134!1.80e-07!61;UBERON:0002036!1.80e-07!61;UBERON:0003082!1.80e-07!61;UBERON:0000955!2.68e-07!69;UBERON:0006238!2.68e-07!69;UBERON:0007023!7.05e-07!115;UBERON:0000924!7.14e-07!173;UBERON:0006601!7.14e-07!173;UBERON:0000033!7.70e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.41e-10,132;UBERON:0002329,9.15e-09,71;UBERON:0003059,9.15e-09,71;UBERON:0007282,9.15e-09,71;UBERON:0004290,9.15e-09,71;UBERON:0009618,9.15e-09,71;UBERON:0007524,1.06e-08,73;UBERON:0003077,2.01e-08,72;UBERON:0007285,2.01e-08,72;UBERON:0002385,1.40e-07,64;UBERON:0001015,1.40e-07,64;UBERON:0000383,1.40e-07,64;UBERON:0001134,1.51e-07,62;UBERON:0002036,1.51e-07,62;UBERON:0003082,1.51e-07,62;UBERON:0001017,2.81e-07,81;UBERON:0000483,3.04e-07,306;UBERON:0000119,4.12e-07,309;UBERON:0003102,4.40e-07,99;UBERON:0007503,6.16e-07,78;UBERON:0003104,6.21e-07,160;UBERON:0009142,6.21e-07,160;UBERON:0001016,6.63e-07,89;UBERON:0000486,6.73e-07,83;UBERON:0005256,9.30e-07,122 | |||
|phase1_expression=1.2717486548939,2.14100523890983,1.55049844505568,2.00146596706261,2.68176656656373,2.61701557230111,0,3.15859936713415,0,0.245733936501509,0.697801167972428,0.655324116390517,0.527533956456907,1.73272894144065,4.30816588446291,0,1.20538905604795,0.730310090387373,0.487932798790507,1.47745269692145,1.83600622119828,0,2.86235987131057,1.64249310087461,0.753255837568817,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0,0.369754010166788,0,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0.971680998056939,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0,0,0,0.768482119587302,0,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,0,0,0,0.422510572623884,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0.32592226663359,0,1.94826728407911,0.222820913770347,0,0,0,0.25618263945135,0,0.164437904603676,0,0.289803085735052,0,0.535081656179426,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0.451725357233318,0.255973222308837,0,0.710331756132051,0,0.201606743224732,0,0.289648807765598,0,0.670700859703636,1.91793842765295,2.53007406669196,4.51204119572301,4.63508860674636,7.15757352345989,0.973269740605272,0.472674085820339,0.221729397462564,0.790513071238134,1.44076983047484,0,0.370784442784429,0,0.174129737299267,0.26591592103773,0,0,0,0.596287222100115,0,0.694281003215189,1.13061588384802,0.419499436209906,1.6507082516404,0.626984899610432,1.55050055501597,2.13459757612026,1.33888245105868,0.805658634218294,0.760272105718513,1.46437234528902,1.47065232138347,0.81014194788176,0.982297011124877,1.12264686313085,1.0135033243499,0,0,0.916008719652036,0,0,0,2.98183171017191,2.78587125662075,2.51577443545116,2.86836620748814,2.4826786753885,3.36406560085384,1.06748995729705,1.72667283892012,3.11211035399766,3.77189881795127,2.28846664358842,1.05950199351452,0.576175924479999,1.64025002283658,1.5608003841516,0.570471821544449,2.24173020827702,2.46612447151906,2.42809416552197,3.37081936085396,3.0623125688234,1.96534907698829,3.40975077880026,5.94001428641027,2.96720315134268,0.910161361938026,0.718618141816238,1.34668891163253,2.12701483782339,3.87889761677856,1.75591048352335,2.45190236639216,2.40380894250555,2.1552114800404,3.40840307808838,3.63047560991565,2.7551147150743,3.30100205692843,4.12210116953756,5.66809188100384,3.35010341396862,3.03797398034279,4.28722822709274,1.7670364197088,2.57739716198438,2.7479829659198,1.06502877754984,4.53384442024381,2.37384829234683,0.193260853163297,0.272746120590835,0.860413786167011,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.72995471815166,0,1.92972281457866,1.38134921352481,2.78620756819187,1.44375896333917,0.118306800039844,0.674338760312407,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.674156540800822,0,0.38474715694639,0.738155454624648,0,1.6462960453256,1.47008711385542,2.53510069643662,0.982827216677626,1.18157981336281,0,0,0.857839051492628,0.109750285408626,0,0.402115889646523,0.277765335475589,2.28065813717227,1.03993478527958,0,0.927443239800615,1.17408694235822,1.01056513432752,0,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0.93733833986777,0.839910640994298,0.283550194484773,0.626909658919938,0,0,0,0.528290604079356,0.207328115540772,0.576479813667846,0.75745460055828,0.190493682876507,0,0,1.71072446022705,0.308482478109971,0.600686115687835,0.571652865261156,0.897048674762886,1.74384027533312,0.80672114403045,1.42198887333556,0,3.381211010224,1.32969058292435,2.08014873822732,0.514414748524284,2.83698264046557,1.0656887160644,0.428933980974443,0.542621605391443,0,1.62868092146868,3.19852753868291,0,1.80863626235752,1.74306691720059,3.69900067373611,0,0.502257091432126,0,2.63587341040741,3.44585807502342,1.42636905040718,2.02693829334611,1.43833425785268,2.68591444859843,0,0,0,0,0.508189248444927,2.60279707715243,1.54657762555539,1.50764638800914,3.18969375826582,0,0,0,3.18997878469764,1.00034104211935,2.17012018959788,1.66376689224646,1.60586089917446,2.36553622550902,0.937131319941706,1.20378439891088,2.27407504055985,1.03473071292505,0.664225598535437,1.10621501125022,3.73599542212756,0.587403472388222,0.343143423810856,0.206768026122887,0,0.213455115606889,0,1.66435439510497,0.30239029332968,0.992431231275107,2.455391572609,2.24528075546459,1.15325234330131,2.04682899626681,2.41280881715411,5.93672265779964,0.925258162815933,2.84098760501003,1.39616165223476,2.07701771673448,2.32420756919918,0.120859449591622,0.200506470303285,0.184161977871793,2.06666006696292,2.54927635209404,2.36023946926963,0,0.15403067420883,1.56869953835371,0,0.316654886678627,1.13733384070897,0.680374821106063,0.863663664408557,0,0.541892875087706,0.501689773854853,0.764628819135115,0,0.447749509444357,10.3052142023589,10.9802889430458,1.02580050046556,1.6400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| |||
|short_description=p2@STX2 | |||
}} |
Revision as of 21:46, 10 September 2013
Short description: | p2@STX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_STX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392373_5end |
EntrezGene: | STX2 |
HGNC: | 3403 |
UniProt: | P32856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.83e-21 | 76 |
skin fibroblast | 1.05e-10 | 23 |
muscle precursor cell | 9.49e-08 | 58 |
myoblast | 9.49e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.49e-08 | 58 |
muscle cell | 5.40e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.41e-10 | 132 |
somite | 9.15e-09 | 71 |
presomitic mesoderm | 9.15e-09 | 71 |
presumptive segmental plate | 9.15e-09 | 71 |
dermomyotome | 9.15e-09 | 71 |
trunk paraxial mesoderm | 9.15e-09 | 71 |
dense mesenchyme tissue | 1.06e-08 | 73 |
paraxial mesoderm | 2.01e-08 | 72 |
presumptive paraxial mesoderm | 2.01e-08 | 72 |
muscle tissue | 1.40e-07 | 64 |
musculature | 1.40e-07 | 64 |
musculature of body | 1.40e-07 | 64 |
skeletal muscle tissue | 1.51e-07 | 62 |
striated muscle tissue | 1.51e-07 | 62 |
myotome | 1.51e-07 | 62 |
central nervous system | 2.81e-07 | 81 |
epithelium | 3.04e-07 | 306 |
cell layer | 4.12e-07 | 309 |
surface structure | 4.40e-07 | 99 |
epithelial vesicle | 6.16e-07 | 78 |
mesenchyme | 6.21e-07 | 160 |
entire embryonic mesenchyme | 6.21e-07 | 160 |
nervous system | 6.63e-07 | 89 |
multilaminar epithelium | 6.73e-07 | 83 |
trunk mesenchyme | 9.30e-07 | 122 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.