FFCP PHASE1:Hg19::chr12:125398630..125398643,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7316|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12468|TSSclassifier=S|UniProt=F5H265|association_with_transcript=-5bp_to_ENST00000535131_5end|coexpression_cluster_id=C356|description=CAGE_peak_4_at_UBC_5end|id=chr12:125398630..125398643,-|ontology_enrichment_celltype=CL:0000066!2.01e-13!254;CL:0002076!3.48e-08!43|ontology_enrichment_celltype_v019=CL:0002368;3.24e-07;13!CL:0000860;8.52e-07;33!CL:0002057;8.52e-07;33|ontology_enrichment_celltype_v019_2=CL:0000066,7.87e-11,253;CL:0002076,6.50e-08,42;CL:0002368,3.41e-07,13|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000062!6.13e-11!511;UBERON:0001004!8.43e-09!72;UBERON:0000480!4.03e-08!626;UBERON:0000467!4.37e-08!625;UBERON:0000065!5.10e-08!53;UBERON:0000468!5.69e-08!659;UBERON:0000922!2.91e-07!612;UBERON:0002050!4.92e-07!605;UBERON:0005423!4.92e-07!605;UBERON:0000923!6.25e-07!604;UBERON:0005291!6.25e-07!604;UBERON:0006598!6.25e-07!604;UBERON:0002532!6.25e-07!604;UBERON:0008947!8.79e-07!38;UBERON:0003258!8.79e-07!38;UBERON:0007023!9.81e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.726713517082227,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,3.19454117451962,2.09340350391728,1.96597234917155,2.90143676051299,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.152826811495903,0.492603536699674,0.314843125254717,0.393364276848904,1.53531759238885,0.464448369948228,4.59710612239464,4.51808878167375,1.47901604066715,0.232401601740905,0.284338464974843,0,0,1.00272223735071,0,0,0,0,0.290796477559129,0,0.727752183563449,1.85943229524548,1.6446715520873,3.71647645074124,2.3015391385772,1.2808035326455,1.89185783910868,8.96338769915208,7.10033151942209,13.5426486594342,0.752969358170419,1.91034305040492,2.69668181334102,1.53041946185451,3.53021929783703,1.91801137739712,0.329851300186716,0.598390972864896,0.852449501065388,0.870627715885752,1.70215567407342,3.11411124497787,6.02996796616184,3.12889751052121,5.42972111762792,4.23779651843358,4.05105399586321,2.53169909952708,0,0,0.209658645508376,0,0.300353785683013,0.48217676009124,0.570025487482497,0,0.91332076882317,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.983548850569165,1.57204305099666,0.822405995998037,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,1.06976078313403,0.289648807765598,0,0,0.895037932904712,0,0,0.144846518960824,0,0,0.189069634328136,0,0.43917392846563,27.1781581657754,1.82147644146271,1.11235332835329,1.62273696827342,1.39303789839414,0.398873881556595,0,0.571994910780128,0,0.596287222100115,0,0.347140501607594,0,0.419499436209906,1.10047216776027,0.208994966536811,1.8089173141853,1.06729878806013,0.33472061276467,1.61131726843659,0.760272105718513,0.732186172644509,1.83831540172934,1.62028389576352,0.446498641420399,0,0.112611480483322,0,0,0,0,0,3.48875241714027,0.496971951695318,0.886413581652058,2.1185468930115,0,0.354668382198357,0,4.2699598291882,0.49333509683432,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0.910161361938026,0,0,0,0.277064115484183,0,0,0,1.02088964844019,0,0,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0,0.168776332241266,0.292311015483596,0.252433774244115,0.0920498986422993,0,0,0,0,6.3776081543888,6.81865301477087,7.1701148847251,0,0.132529768321485,0.464775771478074,2.17688215532278,0.756962552626885,0,0,0,0,0,1.44375896333917,2.36613600079688,1.85443159085912,0.964044119533928,3.19852520923942,5.01122721412534,1.89816495288877,2.02246962240247,3.13954344200554,1.53898862778556,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,2.57351715447788,6.91426798074341,5.62008766288098,1.20634766893957,1.94435734832912,0,0,0,0,0.469634776943287,1.15493158208859,0,0.190254152234598,1.58040879591855,0.858486162094873,0.246217006087397,0.468008530278475,0.148631162288728,8.43604505880993,4.19955320497149,5.67100388969546,7.25424033893071,4.65014301622339,5.36735750831296,0.492663237895943,0.088048434013226,2.07328115540772,0.576479813667846,2.5248486685276,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,1.06375246633948,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0.355391948742546,0,2.41151501647669,3.48613383440118,0.99972991182057,0,0,0,0,0,0,1.73737568001095,0.205476322550383,0.895304816199478,0.672510863961164,0.591092280605782,1.07813787429759,0.513372145118994,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0.117141414992713,1.20378439891088,0,0,0,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12468 | |||
|TSSclassifier=S | |||
|UniProt=F5H265 | |||
|association_with_transcript=-5bp_to_ENST00000535131_5end | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_4_at_UBC_5end | |||
|id=chr12:125398630..125398643,- | |||
|ontology_enrichment_celltype=CL:0000066!2.01e-13!254;CL:0002076!3.48e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.24e-07;13!CL:0000860;8.52e-07;33!CL:0002057;8.52e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.87e-11,253;CL:0002076,6.50e-08,42;CL:0002368,3.41e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!6.13e-11!511;UBERON:0001004!8.43e-09!72;UBERON:0000480!4.03e-08!626;UBERON:0000467!4.37e-08!625;UBERON:0000065!5.10e-08!53;UBERON:0000468!5.69e-08!659;UBERON:0000922!2.91e-07!612;UBERON:0002050!4.92e-07!605;UBERON:0005423!4.92e-07!605;UBERON:0000923!6.25e-07!604;UBERON:0005291!6.25e-07!604;UBERON:0006598!6.25e-07!604;UBERON:0002532!6.25e-07!604;UBERON:0008947!8.79e-07!38;UBERON:0003258!8.79e-07!38;UBERON:0007023!9.81e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@UBC | |||
}} |
Revision as of 21:37, 10 September 2013
Short description: | p4@UBC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_UBC_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | -5bp_to_ENST00000535131_5end |
EntrezGene: | UBC |
HGNC: | 12468 |
UniProt: | F5H265 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.87e-11 | 253 |
endo-epithelial cell | 6.50e-08 | 42 |
respiratory epithelial cell | 3.41e-07 | 13 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.