FFCP PHASE1:Hg19::chr12:122884525..122884550,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6249|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10461|TSSclassifier=S|UniProt=F5H270|association_with_transcript=10bp_to_ENST00000535290_5end|description=CAGE_peak_3_at_CLIP1_5end|id=chr12:122884525..122884550,-|ontology_enrichment_celltype=CL:0000860!1.51e-10!45;CL:0002057!4.53e-09!42|ontology_enrichment_celltype_v019=CL:0000860;1.25e-21;33!CL:0002057;1.25e-21;33!CL:0000473;7.87e-14;39!CL:0000234;7.87e-14;39!CL:0000576;2.47e-09;48|ontology_enrichment_celltype_v019_2=CL:0000860,5.89e-18,42;CL:0002057,5.89e-18,42;CL:0000473,1.25e-14,48;CL:0000234,1.25e-14,48;CL:0002194,4.45e-10,59;CL:0000576,4.45e-10,59;CL:0000040,4.45e-10,59;CL:0000559,4.45e-10,59;CL:0000839,7.96e-10,66;CL:0002009,1.66e-09,61;CL:0000557,5.19e-08,67;CL:0000766,1.26e-07,72|ontology_enrichment_development_v019=CL:0002057;1.17e-13;42!UBERON:0008947;5.73e-08;29|ontology_enrichment_disease=DOID:305!1.05e-14!106;DOID:0050687!3.75e-12!143;DOID:162!5.76e-07!235;DOID:14566!6.34e-07!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,2.86e-10,106;DOID:0050687,1.25e-08,143|ontology_enrichment_uberon=UBERON:0000062!4.35e-13!511;UBERON:0007023!2.23e-08!115;UBERON:0000468!6.27e-08!659;UBERON:0000467!1.21e-07!625;UBERON:0000480!1.69e-07!626;UBERON:0000077!9.25e-07!130|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,1.07050261945492,0.704772020479856,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.401088894940283,0.651032612147555,0,0,0,1.16318591023652,1.13362783106643,0.727752183563449,1.16214518452842,2.46700732813095,4.64559556342655,1.43846196161075,2.0492856522328,3.07426898855161,7.23965929546899,10.3277549373412,4.06279459783025,2.25890807451126,3.547779950752,2.69668181334102,5.20342617030534,8.02322567690234,5.75403413219137,0,0.598390972864896,0,2.61188314765726,3.40431134814684,2.4912889959823,1.7587406567972,2.60741459210101,3.69221035998698,1.81619850790011,5.15588690382591,4.43047342417238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.392937226493138,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0.633152558322899,1.58891016975863,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,2.37600571456411,0.989067717114227,0,0,0,0,0.554128230968366,0,0.30648779579902,1.05166641234618,0,0.179389635688862,0.427114777637135,0.635795703478686,1.50045548042201,0.515262646192195,1.28820270022815,1.11670113798954,1.5189869901714,0.487185025805993,0,0.644349290496095,0,0.710019185033229,0.503760491138201,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,1.8929088006375,1.34867752062481,1.20505514941741,0.882351781859152,1.08939722046203,0.71181185733329,1.34831308160164,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,2.09080345523293,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0,0.469634776943287,0,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0.829312462163088,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0,0,0,0,0,0,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0.468565659970853,0,0,0,0.664225598535437,0,0.347534457872331,0,0,0,0,0.106727557803444,0,0,0,0.744323423456331,0.61384789315225,0.841980283299221,1.66580894032411,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0,2.05461064305758,0,1.38121483403844,1.26295892981067,0.910455840033585,0.655622074797121,0,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0,1.75407901316748,1.3071772551245,0,0.328014645699706,0,2.98818933778395,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.170453254832202,0,1.15699440752685,0,0.255225424989168,0.10115778085555,0,0.94443704049192,0,0.924100740528266,0,0.869932992075073,0.37064843820784,1.00187420719394,0.744316738719335,0,0.38126038784765,0,0,0.636406495851874,0,0,0,0.117812402345686,0.606547444719948,1.58510321173008,0.421258456238981,0,2.43713489631284,0,0.545999645631943,0.282810863907425,0,0,3.3171948762061,3.5076070820301,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0.354761064070598,1.26664581178598,1.31717957183961,0,0,0.0962221127255121,0,0,2.259451218642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,3.08009970976753,0.740872583160463,2.438554983351,0.99798106963804,0.162806537221949,10.5660072418938,0,0.359300808426348,0,0.122241444182866,0.406896178315738,0.665756774185513,1.40891655513718,0|short_description=p3@CLIP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6249 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10461 | |||
|TSSclassifier=S | |||
|UniProt=F5H270 | |||
|association_with_transcript=10bp_to_ENST00000535290_5end | |||
|description=CAGE_peak_3_at_CLIP1_5end | |||
|id=chr12:122884525..122884550,- | |||
|ontology_enrichment_celltype=CL:0000860!1.51e-10!45;CL:0002057!4.53e-09!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-21;33!CL:0002057;1.25e-21;33!CL:0000473;7.87e-14;39!CL:0000234;7.87e-14;39!CL:0000576;2.47e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.89e-18,42;CL:0002057,5.89e-18,42;CL:0000473,1.25e-14,48;CL:0000234,1.25e-14,48;CL:0002194,4.45e-10,59;CL:0000576,4.45e-10,59;CL:0000040,4.45e-10,59;CL:0000559,4.45e-10,59;CL:0000839,7.96e-10,66;CL:0002009,1.66e-09,61;CL:0000557,5.19e-08,67;CL:0000766,1.26e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-13;42!UBERON:0008947;5.73e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.05e-14!106;DOID:0050687!3.75e-12!143;DOID:162!5.76e-07!235;DOID:14566!6.34e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.86e-10,106;DOID:0050687,1.25e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000062!4.35e-13!511;UBERON:0007023!2.23e-08!115;UBERON:0000468!6.27e-08!659;UBERON:0000467!1.21e-07!625;UBERON:0000480!1.69e-07!626;UBERON:0000077!9.25e-07!130 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.704772020479856,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.401088894940283,0.651032612147555,0,0,0,1.16318591023652,1.13362783106643,0.727752183563449,1.16214518452842,2.46700732813095,4.64559556342655,1.43846196161075,2.0492856522328,3.07426898855161,7.23965929546899,10.3277549373412,4.06279459783025,2.25890807451126,3.547779950752,2.69668181334102,5.20342617030534,8.02322567690234,5.75403413219137,0,0.598390972864896,0,2.61188314765726,3.40431134814684,2.4912889959823,1.7587406567972,2.60741459210101,3.69221035998698,1.81619850790011,5.15588690382591,4.43047342417238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.392937226493138,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0.633152558322899,1.58891016975863,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,2.37600571456411,0.989067717114227,0,0,0,0,0.554128230968366,0,0.30648779579902,1.05166641234618,0,0.179389635688862,0.427114777637135,0.635795703478686,1.50045548042201,0.515262646192195,1.28820270022815,1.11670113798954,1.5189869901714,0.487185025805993,0,0.644349290496095,0,0.710019185033229,0.503760491138201,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,1.8929088006375,1.34867752062481,1.20505514941741,0.882351781859152,1.08939722046203,0.71181185733329,1.34831308160164,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,2.09080345523293,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0,0.469634776943287,0,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0.829312462163088,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0,0,0,0,0,0,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0.468565659970853,0,0,0,0.664225598535437,0,0.347534457872331,0,0,0,0,0.106727557803444,0,0,0,0.744323423456331,0.61384789315225,0.841980283299221,1.66580894032411,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0,2.05461064305758,0,1.38121483403844,1.26295892981067,0.910455840033585,0.655622074797121,0,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0,1.75407901316748,1.3071772551245,0,0.328014645699706,0,2.98818933778395,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.170453254832202,0,1.15699440752685,0,0.255225424989168,0.10115778085555,0,0.94443704049192,0,0.924100740528266,0,0.869932992075073,0.37064843820784,1.00187420719394,0.744316738719335,0,0.38126038784765,0,0,0.636406495851874,0,0,0,0.117812402345686,0.606547444719948,1.58510321173008,0.421258456238981,0,2.43713489631284,0,0.545999645631943,0.282810863907425,0,0,3.3171948762061,3.5076070820301,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0.354761064070598,1.26664581178598,1.31717957183961,0,0,0.0962221127255121,0,0,2.2594512186427,0,0,0,0.689170200620878,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.213648142254946,0,0.980160863924127,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0.278406173895242,0,0.270455678475983,0,0,0,1.46508179271894,0,0,1.13654458722565,0.47748896947538,0,0,0,0.140669416410513,0.111308705022906,0,0,1.19548792950642,0,0,1.63629892003448,0,0.311039587661807,0.629078458031288,21.8405833104243,0,1.67693789582787,0,0,0,0.463840490809256,1.99613798001194,0,0.524759999977174,0.724999575434793,0.455173793141999,0.254253650292766,2.12748913591143,0,0,0,0,0.60298219312704,1.52581736317083,0.331737779793674,0,0.219385397153973,4.90223085835456,0.83654246567162,0.307801034015188,0.455768223388005,0.46112780877612,0.538545866458633,2.39024218228418,0.31900115973192,0.183195186803725,0,0,0,0,0.451191321234361,0.980312671588698,1.67821586975843,0.37950746544837,0,0.632994193584081,1.14262965711403,0.282706142867882,0,0,0.265372693510018,0,1.48260564340311,0.247127877893006,0,0.269604531922708,5.61804353109152,0.468528891450678,0,1.36965233252463,2.42780379534093,3.15667522279512,0,0,0.189559738885464,1.65355761355942,0.622129148383483,1.99396161812156,0.992975867626496,0.627865836814451,1.19472429772959,4.26914319044689,0.416024019039416,0,1.56787835863004,0.783532859223623,1.57254001417827,1.89184635718778,2.6124209448053,2.77739404927505,2.05288642633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| |||
|short_description=p3@CLIP1 | |||
}} |
Revision as of 21:26, 10 September 2013
Short description: | p3@CLIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CLIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000535290_5end |
EntrezGene: | CLIP1 |
HGNC: | 10461 |
UniProt: | F5H270 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.89e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.89e-18 | 42 |
defensive cell | 1.25e-14 | 48 |
phagocyte | 1.25e-14 | 48 |
monopoietic cell | 4.45e-10 | 59 |
monocyte | 4.45e-10 | 59 |
monoblast | 4.45e-10 | 59 |
promonocyte | 4.45e-10 | 59 |
myeloid lineage restricted progenitor cell | 7.96e-10 | 66 |
macrophage dendritic cell progenitor | 1.66e-09 | 61 |
granulocyte monocyte progenitor cell | 5.19e-08 | 67 |
myeloid leukocyte | 1.26e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.86e-10 | 106 |
cell type cancer | 1.25e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.