FFCP PHASE1:Hg19::chr12:120502386..120502408,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=92558|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28095|TSSclassifier=S|UniProt=B4DNE7|association_with_transcript=-32bp_to_ENST00000446727,ENST00000546790,uc010sze.1_5end|coexpression_cluster_id=C231|description=CAGE_peak_1_at_CCDC64_5end|id=chr12:120502386..120502408,+|ontology_enrichment_celltype=CL:0000077!2.44e-19!19;CL:0001014!4.11e-09!2;CL:0001016!4.11e-09!2;CL:0000632!6.09e-09!2;CL:0002097!7.12e-09!2|ontology_enrichment_celltype_v019=CL:0000077;4.10e-34;19!CL:0002097;3.82e-08;2!CL:0001014;5.19e-08;2!CL:0001016;5.19e-08;2!CL:0000213;1.36e-07;58!CL:0000215;1.36e-07;58|ontology_enrichment_celltype_v019_2=CL:0000077,3.81e-34,19;CL:0000213,7.36e-11,58;CL:0000215,7.36e-11,58;CL:0000076,5.94e-10,63;CL:0002097,3.82e-08,2;CL:0001014,5.37e-08,2;CL:0001016,5.37e-08,2|ontology_enrichment_development_v019=UBERON:0007297;6.15e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001301;1.41e-14;1!UBERON:0002426;2.41e-14;1!UBERON:0003831;2.41e-14;1!UBERON:0003898;2.41e-14;1!UBERON:0004830;2.41e-14;1!UBERON:0003830;2.41e-14;1!UBERON:0005175;2.41e-14;1!UBERON:0001774;2.41e-14;1!UBERON:0001103;2.41e-14;1!UBERON:0005090;8.04e-08;2!UBERON:0001630;8.04e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.61e-14,1;UBERON:0002426,1.84e-14,1;UBERON:0003831,1.84e-14,1;UBERON:0003898,1.84e-14,1;UBERON:0004830,1.84e-14,1;UBERON:0003830,1.84e-14,1;UBERON:0005175,1.84e-14,1;UBERON:0001774,1.84e-14,1;UBERON:0001103,1.84e-14,1;UBERON:0010084,1.84e-14,1;UBERON:0005090,7.03e-08,2;UBERON:0001630,7.03e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06400514659507,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0863626235752,8.71533458600294,31.59146521353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,3.0952078182318,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,2.66563648518157,0,0,0.322231671127465,0,0,0,0,0,0,0.192619830407303,26.1618741477409,0.260994291965212,0,0,0,0,3.39681591877069,5.70138528904638,0,2.70079653579281,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0|short_description=p1@CCDC64}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=92558 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28095 | |||
|TSSclassifier=S | |||
|UniProt=B4DNE7 | |||
|association_with_transcript=-32bp_to_ENST00000446727,ENST00000546790,uc010sze.1_5end | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_1_at_CCDC64_5end | |||
|id=chr12:120502386..120502408,+ | |||
|ontology_enrichment_celltype=CL:0000077!2.44e-19!19;CL:0001014!4.11e-09!2;CL:0001016!4.11e-09!2;CL:0000632!6.09e-09!2;CL:0002097!7.12e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.10e-34;19!CL:0002097;3.82e-08;2!CL:0001014;5.19e-08;2!CL:0001016;5.19e-08;2!CL:0000213;1.36e-07;58!CL:0000215;1.36e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.81e-34,19;CL:0000213,7.36e-11,58;CL:0000215,7.36e-11,58;CL:0000076,5.94e-10,63;CL:0002097,3.82e-08,2;CL:0001014,5.37e-08,2;CL:0001016,5.37e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.15e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.41e-14;1!UBERON:0002426;2.41e-14;1!UBERON:0003831;2.41e-14;1!UBERON:0003898;2.41e-14;1!UBERON:0004830;2.41e-14;1!UBERON:0003830;2.41e-14;1!UBERON:0005175;2.41e-14;1!UBERON:0001774;2.41e-14;1!UBERON:0001103;2.41e-14;1!UBERON:0005090;8.04e-08;2!UBERON:0001630;8.04e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.61e-14,1;UBERON:0002426,1.84e-14,1;UBERON:0003831,1.84e-14,1;UBERON:0003898,1.84e-14,1;UBERON:0004830,1.84e-14,1;UBERON:0003830,1.84e-14,1;UBERON:0005175,1.84e-14,1;UBERON:0001774,1.84e-14,1;UBERON:0001103,1.84e-14,1;UBERON:0010084,1.84e-14,1;UBERON:0005090,7.03e-08,2;UBERON:0001630,7.03e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06400514659507,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0863626235752,8.71533458600294,31.59146521353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,3.0952078182318,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,2.66563648518157,0,0,0.322231671127465,0,0,0,0,0,0,0.192619830407303,26.1618741477409,0.260994291965212,0,0,0,0,3.39681591877069,5.70138528904638,0,2.70079653579281,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p1@CCDC64 | |||
}} |
Revision as of 21:14, 10 September 2013
Short description: | p1@CCDC64 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CCDC64_5end |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | -32bp_to_ENST00000446727, ENST00000546790, uc010sze.1_5end |
EntrezGene: | CCDC64 |
HGNC: | 28095 |
UniProt: | B4DNE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.81e-34 | 19 |
lining cell | 7.36e-11 | 58 |
barrier cell | 7.36e-11 | 58 |
squamous epithelial cell | 5.94e-10 | 63 |
cortical cell of adrenal gland | 3.82e-08 | 2 |
CD1a-positive Langerhans cell | 5.37e-08 | 2 |
immature CD1a-positive Langerhans cell | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.61e-14 | 1 |
chest muscle | 1.84e-14 | 1 |
respiratory system muscle | 1.84e-14 | 1 |
skeletal muscle of trunk | 1.84e-14 | 1 |
respiratory system skeletal muscle | 1.84e-14 | 1 |
thoracic segment muscle | 1.84e-14 | 1 |
chest organ | 1.84e-14 | 1 |
muscle of trunk | 1.84e-14 | 1 |
diaphragm | 1.84e-14 | 1 |
future diaphragm | 1.84e-14 | 1 |
muscle structure | 7.03e-08 | 2 |
muscle organ | 7.03e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.