FFCP PHASE1:Hg19::chr11:67888809..67888832,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1937 | |||
|TSSclassifier=S | |||
|UniProt=P35790 | |||
|association_with_transcript=25bp_to_NM_001277,NM_212469,uc001onj.2,uc001onk.2_5end | |||
|description=CAGE_peak_2_at_CHKA_5end | |||
|id=chr11:67888809..67888832,- | |||
|ontology_enrichment_celltype=CL:0000766!2.92e-29!76;CL:0000557!9.63e-26!71;CL:0000839!1.43e-24!70;CL:0002194!4.39e-24!63;CL:0000576!4.39e-24!63;CL:0000040!4.39e-24!63;CL:0000559!4.39e-24!63;CL:0002009!2.12e-23!65;CL:0000763!8.17e-23!112;CL:0000049!8.17e-23!112;CL:0000860!2.97e-21!45;CL:0002057!3.80e-20!42;CL:0000738!4.74e-12!140;CL:0000037!8.22e-11!172;CL:0000566!8.22e-11!172;CL:0002032!1.17e-10!165;CL:0000837!1.17e-10!165;CL:0000988!1.93e-10!182;CL:0002087!5.32e-09!119;CL:0002031!7.61e-09!124;CL:0002393!5.65e-07!9;CL:0002397!5.65e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.28e-14;48!CL:0000860;6.88e-14;33!CL:0002057;6.88e-14;33!CL:0000766;1.02e-13;69!CL:0000473;8.87e-13;39!CL:0000234;8.87e-13;39!CL:0000763;5.14e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.96e-30,72;CL:0000557,4.45e-26,67;CL:0000839,4.63e-25,66;CL:0002194,1.31e-24,59;CL:0000576,1.31e-24,59;CL:0000040,1.31e-24,59;CL:0000559,1.31e-24,59;CL:0002009,1.26e-23,61;CL:0000763,5.17e-23,108;CL:0000049,5.17e-23,108;CL:0000473,4.81e-22,48;CL:0000234,4.81e-22,48;CL:0000860,3.95e-21,42;CL:0002057,3.95e-21,42;CL:0000738,2.56e-12,136;CL:0000037,4.59e-11,168;CL:0002032,9.09e-11,161;CL:0000837,9.09e-11,161;CL:0000988,1.37e-10,177;CL:0002087,4.34e-09,115;CL:0002031,8.14e-09,120;CL:0002393,2.91e-07,9;CL:0002397,2.91e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.56e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;9.29e-12;34!UBERON:0003528;1.17e-11;34!UBERON:0002020;1.17e-11;34!UBERON:0002791;1.30e-11;32!UBERON:0001869;2.01e-11;32!UBERON:0002780;2.85e-11;41!UBERON:0001890;2.85e-11;41!UBERON:0000956;1.94e-09;25!UBERON:0000203;1.94e-09;25!UBERON:0000073;3.09e-09;53!UBERON:0002616;3.09e-09;53!UBERON:0002619;6.86e-09;22!UBERON:0001950;3.20e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.20e-21,76;UBERON:0001474,5.07e-20,82;UBERON:0002405,1.68e-17,93;UBERON:0001049,2.23e-16,56;UBERON:0005068,2.23e-16,56;UBERON:0006241,2.23e-16,56;UBERON:0007135,2.23e-16,56;UBERON:0002390,2.91e-16,98;UBERON:0003061,2.91e-16,98;UBERON:0000073,2.23e-15,53;UBERON:0002616,2.23e-15,53;UBERON:0004765,2.62e-15,90;UBERON:0002193,2.98e-15,108;UBERON:0002780,9.64e-15,41;UBERON:0001890,9.64e-15,41;UBERON:0003080,9.64e-15,41;UBERON:0006240,9.64e-15,41;UBERON:0001017,1.40e-14,81;UBERON:0007023,1.03e-13,114;UBERON:0001893,1.82e-13,34;UBERON:0003528,1.94e-13,34;UBERON:0002020,1.94e-13,34;UBERON:0001016,2.28e-13,89;UBERON:0002791,2.15e-12,32;UBERON:0001434,3.01e-12,100;UBERON:0001869,3.28e-12,32;UBERON:0000955,3.76e-12,68;UBERON:0006238,3.76e-12,68;UBERON:0003075,9.82e-12,82;UBERON:0007284,9.82e-12,82;UBERON:0003056,2.48e-11,61;UBERON:0002346,1.93e-10,86;UBERON:0011216,2.56e-10,223;UBERON:0000956,2.39e-09,25;UBERON:0000203,2.39e-09,25;UBERON:0002619,6.69e-09,22;UBERON:0001950,3.59e-08,20;UBERON:0010371,6.46e-07,104 | |||
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| |||
|short_description=p2@CHKA | |||
}} |
Revision as of 19:19, 10 September 2013
Short description: | p2@CHKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CHKA_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_NM_001277, NM_212469, uc001onj.2, uc001onk.2_5end |
EntrezGene: | CHKA |
HGNC: | 1937 |
UniProt: | P35790 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.96e-30 | 72 |
granulocyte monocyte progenitor cell | 4.45e-26 | 67 |
myeloid lineage restricted progenitor cell | 4.63e-25 | 66 |
monopoietic cell | 1.31e-24 | 59 |
monocyte | 1.31e-24 | 59 |
monoblast | 1.31e-24 | 59 |
promonocyte | 1.31e-24 | 59 |
macrophage dendritic cell progenitor | 1.26e-23 | 61 |
myeloid cell | 5.17e-23 | 108 |
common myeloid progenitor | 5.17e-23 | 108 |
defensive cell | 4.81e-22 | 48 |
phagocyte | 4.81e-22 | 48 |
classical monocyte | 3.95e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.95e-21 | 42 |
leukocyte | 2.56e-12 | 136 |
hematopoietic stem cell | 4.59e-11 | 168 |
hematopoietic oligopotent progenitor cell | 9.09e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.09e-11 | 161 |
hematopoietic cell | 1.37e-10 | 177 |
nongranular leukocyte | 4.34e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.14e-09 | 120 |
intermediate monocyte | 2.91e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.91e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.