FFCP PHASE1:Hg19::chr11:64900193..64900215,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1337|description=CAGE_peak_at_chr11:64900193..64900215,+|id=chr11:64900193..64900215,+|ontology_enrichment_celltype=CL:0000945!6.47e-47!24;CL:0000826!6.47e-47!24;CL:0000236!3.03e-23!14;CL:0000542!1.24e-20!53;CL:0000051!1.24e-20!53;CL:0000838!7.59e-19!52;CL:0000817!5.37e-11!3;CL:0002087!7.35e-10!119;CL:0000738!2.07e-08!140;CL:0002031!2.93e-08!124;CL:0000785!1.02e-07!2;CL:0000955!1.02e-07!2;CL:0000818!1.02e-07!2;CL:0000954!1.02e-07!2;CL:0000816!1.02e-07!2|ontology_enrichment_celltype_v019=CL:0000945;1.92e-73;24!CL:0000236;1.84e-60;13!CL:0000542;1.72e-26;53!CL:0000817;3.28e-23;1!CL:0000785;3.28e-23;1!CL:0000819;3.28e-23;1|ontology_enrichment_celltype_v019_2=CL:0000945,1.93e-73,24;CL:0000826,1.93e-73,24;CL:0000236,2.99e-56,14;CL:0000838,6.05e-34,52;CL:0000542,2.64e-33,53;CL:0000051,2.64e-33,53;CL:0000817,5.61e-30,3;CL:0000819,6.40e-23,1;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0000785,3.62e-12,2;CL:0000955,3.62e-12,2;CL:0000818,3.62e-12,2;CL:0000954,3.62e-12,2;CL:0000816,3.62e-12,2;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177|ontology_enrichment_development_v019=CL:0000051;1.72e-26;53!CL:0000954;2.59e-12;2|ontology_enrichment_disease=DOID:0060058!5.31e-12!10|ontology_enrichment_disease_v019=DOID:0060058;1.78e-35;10!DOID:0060073;3.28e-23;1!DOID:8675;3.28e-23;1!DOID:2531;9.84e-07;51!DOID:0060083;9.84e-07;51|ontology_enrichment_disease_v019_2=DOID:0060058,2.78e-35,10;DOID:0060073,6.40e-23,1;DOID:8675,6.40e-23,1;DOID:2531,6.04e-11,51;DOID:0060083,6.04e-11,51|ontology_enrichment_uberon=UBERON:0001829!7.31e-08!2;UBERON:0004177!3.21e-07!7|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0,0,0,3.25362242437267,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,1.63841583378639,1.77901850772711,5.12076267079809,0.400395987036012,0.574752439954483,0,0,0,1.17447437874188,0.764546456250458,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0.245040215981032,0.557409525377156,1.58696134274089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,1.46151118057075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788617450012533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.257831551894309,0.499705779624645,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p@chr11:64900193..64900215,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1337 | |||
|description=CAGE_peak_at_chr11:64900193..64900215,+ | |||
|id=chr11:64900193..64900215,+ | |||
|ontology_enrichment_celltype=CL:0000945!6.47e-47!24;CL:0000826!6.47e-47!24;CL:0000236!3.03e-23!14;CL:0000542!1.24e-20!53;CL:0000051!1.24e-20!53;CL:0000838!7.59e-19!52;CL:0000817!5.37e-11!3;CL:0002087!7.35e-10!119;CL:0000738!2.07e-08!140;CL:0002031!2.93e-08!124;CL:0000785!1.02e-07!2;CL:0000955!1.02e-07!2;CL:0000818!1.02e-07!2;CL:0000954!1.02e-07!2;CL:0000816!1.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.92e-73;24!CL:0000236;1.84e-60;13!CL:0000542;1.72e-26;53!CL:0000817;3.28e-23;1!CL:0000785;3.28e-23;1!CL:0000819;3.28e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.93e-73,24;CL:0000826,1.93e-73,24;CL:0000236,2.99e-56,14;CL:0000838,6.05e-34,52;CL:0000542,2.64e-33,53;CL:0000051,2.64e-33,53;CL:0000817,5.61e-30,3;CL:0000819,6.40e-23,1;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0000785,3.62e-12,2;CL:0000955,3.62e-12,2;CL:0000818,3.62e-12,2;CL:0000954,3.62e-12,2;CL:0000816,3.62e-12,2;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.72e-26;53!CL:0000954;2.59e-12;2 | |||
|ontology_enrichment_disease=DOID:0060058!5.31e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.78e-35;10!DOID:0060073;3.28e-23;1!DOID:8675;3.28e-23;1!DOID:2531;9.84e-07;51!DOID:0060083;9.84e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.78e-35,10;DOID:0060073,6.40e-23,1;DOID:8675,6.40e-23,1;DOID:2531,6.04e-11,51;DOID:0060083,6.04e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0001829!7.31e-08!2;UBERON:0004177!3.21e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0,0,0,3.25362242437267,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,1.63841583378639,1.77901850772711,5.12076267079809,0.400395987036012,0.574752439954483,0,0,0,1.17447437874188,0.764546456250458,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0.245040215981032,0.557409525377156,1.58696134274089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,1.46151118057075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788617450012533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.257831551894309,0.499705779624645,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr11:64900193..64900215,+ | |||
}} |
Revision as of 18:52, 10 September 2013
Short description: | p@chr11:64900193..64900215, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:64900193..64900215, + |
Coexpression cluster: | C1337_Burkitt_CD19_lymphoma_diffuse_acute_tonsil_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.93e-73 | 24 |
pro-B cell | 1.93e-73 | 24 |
B cell | 2.99e-56 | 14 |
lymphoid lineage restricted progenitor cell | 6.05e-34 | 52 |
lymphocyte | 2.64e-33 | 53 |
common lymphoid progenitor | 2.64e-33 | 53 |
precursor B cell | 5.61e-30 | 3 |
B-1 B cell | 6.40e-23 | 1 |
nongranular leukocyte | 3.68e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.59e-14 | 120 |
leukocyte | 8.37e-13 | 136 |
mature B cell | 3.62e-12 | 2 |
pre-B-II cell | 3.62e-12 | 2 |
transitional stage B cell | 3.62e-12 | 2 |
small pre-B-II cell | 3.62e-12 | 2 |
immature B cell | 3.62e-12 | 2 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.78e-35 | 10 |
lymphatic system cancer | 6.40e-23 | 1 |
lymphosarcoma | 6.40e-23 | 1 |
hematologic cancer | 6.04e-11 | 51 |
immune system cancer | 6.04e-11 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.