FFCP PHASE1:Hg19::chr11:64126671..64126689,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8986|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10433|TSSclassifier=S|UniProt=E9PKU3|association_with_transcript=17bp_to_ENST00000528355,ENST00000531659_5end|description=CAGE_peak_2_at_RPS6KA4_5end|id=chr11:64126671..64126689,+|ontology_enrichment_celltype=CL:0000144!1.06e-10!625;CL:0000012!1.81e-10!682;CL:0000548!1.99e-10!679;CL:0000004!1.99e-10!679;CL:0000255!1.99e-10!679;CL:0000076!2.00e-10!62;CL:0000220!1.10e-09!246;CL:0000222!1.21e-09!119;CL:0002321!2.40e-09!248;CL:0002371!3.13e-09!591;CL:0000063!6.34e-09!578;CL:0000003!6.71e-09!722;CL:0000066!2.34e-08!254;CL:0002076!5.71e-08!43|ontology_enrichment_celltype_v019=CL:0002076;6.98e-07;42|ontology_enrichment_celltype_v019_2=CL:0000076,6.83e-12,63;CL:0002321,3.06e-09,250;CL:0000066,1.86e-08,253;CL:0002076,1.88e-08,42;CL:0000222,2.40e-08,121|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001637!5.76e-11!42;UBERON:0003509!5.76e-11!42;UBERON:0004572!5.76e-11!42;UBERON:0003081!2.26e-10!216;UBERON:0004872!3.74e-10!84;UBERON:0000055!4.98e-10!69;UBERON:0001981!5.01e-10!60;UBERON:0007500!5.01e-10!60;UBERON:0004537!5.01e-10!60;UBERON:0006965!5.01e-10!60;UBERON:0002049!5.69e-08!79;UBERON:0007798!5.69e-08!79;UBERON:0004573!1.18e-07!33;UBERON:0004571!1.18e-07!33;UBERON:0000467!4.17e-07!625;UBERON:0000480!4.97e-07!626|ontology_enrichment_uberon_v019=UBERON:0001637;7.02e-09;42!UBERON:0003509;7.02e-09;42!UBERON:0004572;7.02e-09;42|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.82e-11,42;UBERON:0003509,1.82e-11,42;UBERON:0004572,1.82e-11,42;UBERON:0004872,2.81e-10,83;UBERON:0007500,8.60e-10,59;UBERON:0001981,8.60e-10,59;UBERON:0004537,8.60e-10,59;UBERON:0006965,8.60e-10,59;UBERON:0003081,1.12e-09,203;UBERON:0000055,1.40e-09,68;UBERON:0004573,9.40e-08,33;UBERON:0004571,9.40e-08,33|phase1_expression=1.2717486548939,2.99740733447376,0.563817616383885,1.0007329835313,0,1.74467704820074,0,3.15859936713415,0.261185628199839,3.44027511102112,10.4670175195864,13.5433650720707,10.8144461073666,0.123766352960047,0,0,0.602694528023977,2.92124036154949,0.975865597581014,0.984968464614303,3.06001036866379,0.313454721478088,0.286235987131057,1.09499540058307,0.376627918784408,0.840547463227464,0.246301768349837,0.629686250509434,1.57345710739562,0.383829398097213,2.78669021968937,21.1466881630153,16.867531451582,3.69754010166788,0.0774672005803016,0.853015394924529,2.05520307534393,3.87796785972314,2.4065333696417,1.30206522429511,0.895661896959697,0.647787332037959,0.515151135268373,2.76256653681173,1.51150377475524,2.18325655069035,0.697287110717054,0.822335776043652,0.929119112685311,0.28769239232215,2.81776777182011,1.18241114944293,2.06847408441971,0.645484683583826,1.35426486594342,0.376484679085209,1.36453075028923,1.12361742222542,2.75475503133812,1.60464513538047,0,0.989553900560148,1.39624560335142,2.13112375266347,0.870627715885752,1.13477044938228,0,2.76373531782418,1.0429658368404,2.38907729175628,0,1.10483290796269,1.58231193720442,6.12640330304631,3.61427309940574,3.56419697364239,5.27944566388527,5.10601435661121,0.964353520182481,2.85012743741249,2.58591680358817,1.46131323011707,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0,0,1.12101712596307,2.37045676297569,0.196709770113833,0,0.616804496998528,0.668745981562712,0.32592226663359,0,0,0.222820913770347,0.294605907474837,0.886135578334485,0.541607727530031,0.25618263945135,0.650296737799391,0,1.65810010671509,1.44901542867526,0.593146252648242,0.267540828089713,0,0.453237370790265,0.766440987203842,1.03088233644789,0.253019692019503,0,0.651083453856419,0.950452044448374,0.903450714466637,0.127986611154418,1.24930726552346,0,0,0.80642697289893,0.267440195783507,0,2.43806866313962,0,1.40648818027883,0.722878304769133,1.00267582127178,1.59331170856906,0.795285947051099,1.94653948121054,0.472674085820339,0.443458794925128,0.527008714158756,0.392937226493138,7.28590576585084,8.15725774125745,0.97364218096405,1.56716763569341,1.32957960518865,11.9245312152671,14.8718676802833,10.7722675385574,2.58391129576717,2.58070378531837,1.73570250803797,5.6530794192401,3.35599548967925,2.75118041940067,2.29894463190492,2.06733407335463,1.77883131343355,0.33472061276467,1.61131726843659,1.52054421143703,1.95249646038536,0.367663080345869,4.0507097394088,1.51809538082936,1.12264686313085,1.57656072676651,1.53316637465883,0.949265659568129,1.46561395144326,0,0,4.36094052142534,1.49091585508596,2.15271869829786,3.31022952033047,3.72887606973458,1.41867352879343,1.12135520028461,1.06748995729705,2.4666754841716,0.622422070799533,0.538842688278752,2.28846664358842,0.756787138224657,0,0.70296429550139,0.624320153660641,3.4228309292667,1.34503812496621,0.117434498643765,1.29498355494505,0.98315564691574,0.408308342509787,0.737005903870608,0.516628905878827,1.18800285728205,0.494533858557114,2.73048408581408,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13361816,1.57673541466596,0.315543124386369,2.17572768610927,0,0.5290268405154,1.85997509083376,1.38652688589425,3.02838593486652,0.378499274505237,0,0.126698501011437,0.61193297845189,0.534434810531121,1.10273879441814,0.250707539292375,0.151557396436479,0.535928260312357,0,1.86179392551411,0.852935927603924,0.714193294391221,0.645889098360061,0.558672428662721,0.672791175483681,0.25458863311266,0.404234377916439,1.74173398317569,0.342233301085281,2.35732185551056,0.645499848534087,0.665320713092027,1.13964576055364,0.106727345877715,1.9307228228694,0.718601616852695,2.34640942403454,0.611207220914332,0,0.665756774185513,1.00636896795513,0.641136984606466|short_description=p2@RPS6KA4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8986 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10433 | |||
|TSSclassifier=S | |||
|UniProt=E9PKU3 | |||
|association_with_transcript=17bp_to_ENST00000528355,ENST00000531659_5end | |||
|description=CAGE_peak_2_at_RPS6KA4_5end | |||
|id=chr11:64126671..64126689,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.06e-10!625;CL:0000012!1.81e-10!682;CL:0000548!1.99e-10!679;CL:0000004!1.99e-10!679;CL:0000255!1.99e-10!679;CL:0000076!2.00e-10!62;CL:0000220!1.10e-09!246;CL:0000222!1.21e-09!119;CL:0002321!2.40e-09!248;CL:0002371!3.13e-09!591;CL:0000063!6.34e-09!578;CL:0000003!6.71e-09!722;CL:0000066!2.34e-08!254;CL:0002076!5.71e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.98e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,6.83e-12,63;CL:0002321,3.06e-09,250;CL:0000066,1.86e-08,253;CL:0002076,1.88e-08,42;CL:0000222,2.40e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!5.76e-11!42;UBERON:0003509!5.76e-11!42;UBERON:0004572!5.76e-11!42;UBERON:0003081!2.26e-10!216;UBERON:0004872!3.74e-10!84;UBERON:0000055!4.98e-10!69;UBERON:0001981!5.01e-10!60;UBERON:0007500!5.01e-10!60;UBERON:0004537!5.01e-10!60;UBERON:0006965!5.01e-10!60;UBERON:0002049!5.69e-08!79;UBERON:0007798!5.69e-08!79;UBERON:0004573!1.18e-07!33;UBERON:0004571!1.18e-07!33;UBERON:0000467!4.17e-07!625;UBERON:0000480!4.97e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.02e-09;42!UBERON:0003509;7.02e-09;42!UBERON:0004572;7.02e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.82e-11,42;UBERON:0003509,1.82e-11,42;UBERON:0004572,1.82e-11,42;UBERON:0004872,2.81e-10,83;UBERON:0007500,8.60e-10,59;UBERON:0001981,8.60e-10,59;UBERON:0004537,8.60e-10,59;UBERON:0006965,8.60e-10,59;UBERON:0003081,1.12e-09,203;UBERON:0000055,1.40e-09,68;UBERON:0004573,9.40e-08,33;UBERON:0004571,9.40e-08,33 | |||
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| |||
|short_description=p2@RPS6KA4 | |||
}} |
Revision as of 18:46, 10 September 2013
Short description: | p2@RPS6KA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RPS6KA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000528355, ENST00000531659_5end |
EntrezGene: | RPS6KA4 |
HGNC: | 10433 |
UniProt: | E9PKU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 6.83e-12 | 63 |
embryonic cell | 3.06e-09 | 250 |
epithelial cell | 1.86e-08 | 253 |
endo-epithelial cell | 1.88e-08 | 42 |
mesodermal cell | 2.40e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
artery | 1.82e-11 | 42 |
arterial blood vessel | 1.82e-11 | 42 |
arterial system | 1.82e-11 | 42 |
splanchnic layer of lateral plate mesoderm | 2.81e-10 | 83 |
epithelial tube open at both ends | 8.60e-10 | 59 |
blood vessel | 8.60e-10 | 59 |
blood vasculature | 8.60e-10 | 59 |
vascular cord | 8.60e-10 | 59 |
lateral plate mesoderm | 1.12e-09 | 203 |
vessel | 1.40e-09 | 68 |
systemic artery | 9.40e-08 | 33 |
systemic arterial system | 9.40e-08 | 33 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.