FFCP PHASE1:Hg19::chr11:62752463..62752474,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9356|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10970|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000394651,uc001nwj.2,uc001nwk.2,uc001nwl.2,uc001nwm.2_5end|coexpression_cluster_id=C41|description=CAGE_peak_5_at_SLC22A6_5end|id=chr11:62752463..62752474,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3!UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!2.71e-34!86;UBERON:0001049!1.75e-33!57;UBERON:0005068!1.75e-33!57;UBERON:0006241!1.75e-33!57;UBERON:0007135!1.75e-33!57;UBERON:0001017!3.10e-32!82;UBERON:0000073!8.17e-31!94;UBERON:0001016!8.17e-31!94;UBERON:0000955!1.72e-30!69;UBERON:0006238!1.72e-30!69;UBERON:0002616!4.09e-28!59;UBERON:0003075!1.09e-27!86;UBERON:0007284!1.09e-27!86;UBERON:0001893!1.95e-26!34;UBERON:0002346!2.44e-26!90;UBERON:0002780!5.96e-26!41;UBERON:0001890!5.96e-26!41;UBERON:0006240!5.96e-26!41;UBERON:0007023!1.67e-25!115;UBERON:0003080!2.65e-25!42;UBERON:0001869!3.45e-23!32;UBERON:0002791!1.59e-22!33;UBERON:0002020!6.42e-22!34;UBERON:0003528!6.42e-22!34;UBERON:0003056!3.93e-20!61;UBERON:0000369!4.02e-19!4;UBERON:0002435!4.02e-19!4;UBERON:0000204!4.02e-19!4;UBERON:0010082!4.02e-19!4;UBERON:0000033!2.66e-18!123;UBERON:0000153!2.54e-17!129;UBERON:0007811!2.54e-17!129;UBERON:0004121!6.12e-16!169;UBERON:0000924!1.68e-15!173;UBERON:0006601!1.68e-15!173;UBERON:0002308!5.15e-15!9;UBERON:0000125!5.15e-15!9;UBERON:0002420!6.41e-15!9;UBERON:0007245!6.41e-15!9;UBERON:0010009!6.41e-15!9;UBERON:0010011!6.41e-15!9;UBERON:0000454!6.41e-15!9;UBERON:0001950!1.30e-13!20;UBERON:0002619!2.16e-12!22;UBERON:0005383!4.22e-12!3;UBERON:0005382!4.22e-12!3;UBERON:0001896!4.72e-12!3;UBERON:0005290!4.72e-12!3;UBERON:0010096!4.72e-12!3;UBERON:0009663!3.54e-11!7;UBERON:0000956!6.53e-11!25;UBERON:0000203!6.53e-11!25;UBERON:0002298!5.10e-10!8;UBERON:0001874!7.50e-10!1;UBERON:0002902!1.15e-09!1;UBERON:0009899!1.15e-09!1;UBERON:0002336!1.25e-09!1;UBERON:0001018!1.25e-09!1;UBERON:0002473!1.25e-09!1;UBERON:0005340!1.25e-09!1;UBERON:0002316!1.25e-09!1;UBERON:0003544!1.25e-09!1;UBERON:0001020!1.25e-09!1;UBERON:0005970!1.25e-09!1;UBERON:0002437!1.25e-09!1;UBERON:0007190!2.08e-09!1;UBERON:0001882!2.26e-09!1;UBERON:0005403!2.26e-09!1;UBERON:0002022!2.67e-09!1;UBERON:0003076!3.19e-09!15;UBERON:0003057!3.19e-09!15;UBERON:0000025!5.37e-08!194;UBERON:0002021!1.32e-07!5;UBERON:0000349!1.77e-07!5;UBERON:0004733!7.79e-07!12;UBERON:0002028!7.79e-07!12;UBERON:0007277!7.79e-07!12|ontology_enrichment_uberon_v019=UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,3.15222829196793,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,4.21711610642272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9356 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10970 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000394651,uc001nwj.2,uc001nwk.2,uc001nwl.2,uc001nwm.2_5end | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_5_at_SLC22A6_5end | |||
|id=chr11:62752463..62752474,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3!UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.71e-34!86;UBERON:0001049!1.75e-33!57;UBERON:0005068!1.75e-33!57;UBERON:0006241!1.75e-33!57;UBERON:0007135!1.75e-33!57;UBERON:0001017!3.10e-32!82;UBERON:0000073!8.17e-31!94;UBERON:0001016!8.17e-31!94;UBERON:0000955!1.72e-30!69;UBERON:0006238!1.72e-30!69;UBERON:0002616!4.09e-28!59;UBERON:0003075!1.09e-27!86;UBERON:0007284!1.09e-27!86;UBERON:0001893!1.95e-26!34;UBERON:0002346!2.44e-26!90;UBERON:0002780!5.96e-26!41;UBERON:0001890!5.96e-26!41;UBERON:0006240!5.96e-26!41;UBERON:0007023!1.67e-25!115;UBERON:0003080!2.65e-25!42;UBERON:0001869!3.45e-23!32;UBERON:0002791!1.59e-22!33;UBERON:0002020!6.42e-22!34;UBERON:0003528!6.42e-22!34;UBERON:0003056!3.93e-20!61;UBERON:0000369!4.02e-19!4;UBERON:0002435!4.02e-19!4;UBERON:0000204!4.02e-19!4;UBERON:0010082!4.02e-19!4;UBERON:0000033!2.66e-18!123;UBERON:0000153!2.54e-17!129;UBERON:0007811!2.54e-17!129;UBERON:0004121!6.12e-16!169;UBERON:0000924!1.68e-15!173;UBERON:0006601!1.68e-15!173;UBERON:0002308!5.15e-15!9;UBERON:0000125!5.15e-15!9;UBERON:0002420!6.41e-15!9;UBERON:0007245!6.41e-15!9;UBERON:0010009!6.41e-15!9;UBERON:0010011!6.41e-15!9;UBERON:0000454!6.41e-15!9;UBERON:0001950!1.30e-13!20;UBERON:0002619!2.16e-12!22;UBERON:0005383!4.22e-12!3;UBERON:0005382!4.22e-12!3;UBERON:0001896!4.72e-12!3;UBERON:0005290!4.72e-12!3;UBERON:0010096!4.72e-12!3;UBERON:0009663!3.54e-11!7;UBERON:0000956!6.53e-11!25;UBERON:0000203!6.53e-11!25;UBERON:0002298!5.10e-10!8;UBERON:0001874!7.50e-10!1;UBERON:0002902!1.15e-09!1;UBERON:0009899!1.15e-09!1;UBERON:0002336!1.25e-09!1;UBERON:0001018!1.25e-09!1;UBERON:0002473!1.25e-09!1;UBERON:0005340!1.25e-09!1;UBERON:0002316!1.25e-09!1;UBERON:0003544!1.25e-09!1;UBERON:0001020!1.25e-09!1;UBERON:0005970!1.25e-09!1;UBERON:0002437!1.25e-09!1;UBERON:0007190!2.08e-09!1;UBERON:0001882!2.26e-09!1;UBERON:0005403!2.26e-09!1;UBERON:0002022!2.67e-09!1;UBERON:0003076!3.19e-09!15;UBERON:0003057!3.19e-09!15;UBERON:0000025!5.37e-08!194;UBERON:0002021!1.32e-07!5;UBERON:0000349!1.77e-07!5;UBERON:0004733!7.79e-07!12;UBERON:0002028!7.79e-07!12;UBERON:0007277!7.79e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6 | |||
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|short_description=p5@SLC22A6 | |||
}} |
Revision as of 18:37, 10 September 2013
Short description: | p5@SLC22A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC22A6_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000394651, uc001nwj.2, uc001nwk.2, uc001nwl.2, uc001nwm.2_5end |
EntrezGene: | SLC22A6 |
HGNC: | 10970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.