FFCP PHASE1:Hg19::chr11:61672156..61672170,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5866|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9780|TSSclassifier=S|UniProt=|association_with_transcript=3bp_to_ENST00000530888_5end|coexpression_cluster_id=C1|description=CAGE_peak_9_at_RAB3IL1_5end|id=chr11:61672156..61672170,-|ontology_enrichment_celltype=CL:0002322!1.79e-16!5;CL:0000047!3.70e-07!8;CL:1000507!8.84e-07!12;CL:1000494!8.84e-07!12|ontology_enrichment_celltype_v019=CL:1000497;8.47e-07;17!CL:0002518;8.47e-07;17|ontology_enrichment_celltype_v019_2=CL:1000497,8.34e-07,17;CL:0002518,8.34e-07,17|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.61e-07!55;UBERON:0005173!1.61e-07!55;UBERON:0002113!7.19e-07!27;UBERON:0003918!7.19e-07!27;UBERON:0005095!7.19e-07!27;UBERON:0007687!7.19e-07!27;UBERON:0009773!8.84e-07!12;UBERON:0001231!8.84e-07!12;UBERON:0004810!8.84e-07!12|ontology_enrichment_uberon_v019=UBERON:0002331;8.04e-23;10!UBERON:0000178;1.76e-15;15!UBERON:0000179;1.76e-15;15!UBERON:0000463;1.76e-15;15!UBERON:0000478;6.10e-10;24!UBERON:0002390;1.09e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.46e-23,10;UBERON:0000358,7.46e-23,10;UBERON:0000307,7.46e-23,10;UBERON:0000091,7.46e-23,10;UBERON:0000087,7.46e-23,10;UBERON:0007010,7.46e-23,10;UBERON:0007806,7.46e-23,10;UBERON:0008780,7.46e-23,10;UBERON:0005728,7.46e-23,10;UBERON:0000178,1.67e-15,15;UBERON:0000179,1.67e-15,15;UBERON:0000463,1.67e-15,15;UBERON:0000478,5.92e-10,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99486180268024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.0770153371044148,1.56869953835371,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,1.60633120630454,2.50612678813093,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0.393915911536118,0.0824158583811665,0.26961417541674,0,0,0,0,0.482259445395058,0.687697182986169,0.415440338029185,0,0,0,0,0.315222829196793,0.577000469484979,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.12177869407985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0,0.219881033490858,0.301925687133347,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756998549010474,0.109265571963696,0,0,0,0,0,0,9.11078042531007,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p9@RAB3IL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5866 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9780 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=3bp_to_ENST00000530888_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_9_at_RAB3IL1_5end | |||
|id=chr11:61672156..61672170,- | |||
|ontology_enrichment_celltype=CL:0002322!1.79e-16!5;CL:0000047!3.70e-07!8;CL:1000507!8.84e-07!12;CL:1000494!8.84e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000497;8.47e-07;17!CL:0002518;8.47e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,8.34e-07,17;CL:0002518,8.34e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.61e-07!55;UBERON:0005173!1.61e-07!55;UBERON:0002113!7.19e-07!27;UBERON:0003918!7.19e-07!27;UBERON:0005095!7.19e-07!27;UBERON:0007687!7.19e-07!27;UBERON:0009773!8.84e-07!12;UBERON:0001231!8.84e-07!12;UBERON:0004810!8.84e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.04e-23;10!UBERON:0000178;1.76e-15;15!UBERON:0000179;1.76e-15;15!UBERON:0000463;1.76e-15;15!UBERON:0000478;6.10e-10;24!UBERON:0002390;1.09e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.46e-23,10;UBERON:0000358,7.46e-23,10;UBERON:0000307,7.46e-23,10;UBERON:0000091,7.46e-23,10;UBERON:0000087,7.46e-23,10;UBERON:0007010,7.46e-23,10;UBERON:0007806,7.46e-23,10;UBERON:0008780,7.46e-23,10;UBERON:0005728,7.46e-23,10;UBERON:0000178,1.67e-15,15;UBERON:0000179,1.67e-15,15;UBERON:0000463,1.67e-15,15;UBERON:0000478,5.92e-10,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99486180268024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.0770153371044148,1.56869953835371,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,1.60633120630454,2.50612678813093,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0.393915911536118,0.0824158583811665,0.26961417541674,0,0,0,0,0.482259445395058,0.687697182986169,0.415440338029185,0,0,0,0,0.315222829196793,0.577000469484979,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.12177869407985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0,0.219881033490858,0.301925687133347,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756998549010474,0.109265571963696,0,0,0,0,0,0,9.11078042531007,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p9@RAB3IL1 | |||
}} |
Revision as of 18:27, 10 September 2013
Short description: | p9@RAB3IL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RAB3IL1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 3bp_to_ENST00000530888_5end |
EntrezGene: | RAB3IL1 |
HGNC: | 9780 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 8.34e-07 | 17 |
kidney epithelial cell | 8.34e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.46e-23 | 10 |
blastocyst | 7.46e-23 | 10 |
blastula | 7.46e-23 | 10 |
bilaminar disc | 7.46e-23 | 10 |
inner cell mass | 7.46e-23 | 10 |
cleaving embryo | 7.46e-23 | 10 |
connecting stalk | 7.46e-23 | 10 |
inner cell mass derived epiblast | 7.46e-23 | 10 |
extraembryonic mesoderm | 7.46e-23 | 10 |
blood | 1.67e-15 | 15 |
haemolymphatic fluid | 1.67e-15 | 15 |
organism substance | 1.67e-15 | 15 |
extraembryonic structure | 5.92e-10 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.