FFCP PHASE1:Hg19::chr11:61062737..61062756,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=220001|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26487|TSSclassifier=S|UniProt=Q96DN2|association_with_transcript=31bp_to_NM_152718,uc001nra.2,uc001nrb.2_5end|description=CAGE_peak_3_at_VWCE_5end|id=chr11:61062737..61062756,-|ontology_enrichment_celltype=CL:0000115!8.21e-13!35;CL:0002139!6.04e-12!24;CL:0002078!1.50e-11!44;CL:0000213!2.64e-08!57;CL:0000215!2.64e-08!57;CL:0002321!2.04e-07!248;CL:0000222!2.58e-07!119;CL:0000071!3.14e-07!18;CL:0002546!3.14e-07!18;CL:0005020!6.23e-07!6;CL:0002138!6.23e-07!6;CL:0005022!6.23e-07!6;CL:0000220!9.19e-07!246|ontology_enrichment_celltype_v019=CL:0000182;3.91e-12;12!CL:0000540;8.12e-07;6!CL:0000404;8.12e-07;6!CL:0002541;9.59e-07;3|ontology_enrichment_celltype_v019_2=CL:0000182,3.33e-12,12;CL:0000115,2.20e-07,36;CL:0002078,5.84e-07,45;CL:0000540,7.75e-07,6;CL:0000031,7.75e-07,6;CL:0000404,7.75e-07,6;CL:0002541,9.50e-07,3|ontology_enrichment_development_v019=UBERON:0004161;9.20e-10;11!UBERON:0009497;3.34e-08;13!CL:0000031;8.12e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!2.79e-07!118;UBERON:0001986!3.14e-07!18;UBERON:0004638!3.14e-07!18;UBERON:0004852!3.14e-07!18|ontology_enrichment_uberon_v019=UBERON:0002107;6.01e-13;19!UBERON:0006925;6.01e-13;19!UBERON:0002423;1.62e-09;25!UBERON:0002365;3.66e-07;31!UBERON:0002330;3.66e-07;31!UBERON:0003124;9.59e-07;3!UBERON:0000920;9.59e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.67e-13,19;UBERON:0006925,4.67e-13,19;UBERON:0008836,4.67e-13,19;UBERON:0008835,4.32e-11,22;UBERON:0003894,4.32e-11,22;UBERON:0009854,1.50e-10,23;UBERON:0007499,1.35e-09,25;UBERON:0009497,1.35e-09,25;UBERON:0000015,1.35e-09,25;UBERON:0002423,1.35e-09,25;UBERON:0006235,1.35e-09,25;UBERON:0004161,1.35e-09,25;UBERON:0009856,3.55e-09,26;UBERON:0005172,1.67e-08,54;UBERON:0005173,1.67e-08,54;UBERON:0002365,1.76e-07,31;UBERON:0002330,1.76e-07,31;UBERON:0002417,2.07e-07,60;UBERON:0000916,2.07e-07,60;UBERON:0003929,3.63e-07,54;UBERON:0000920,9.50e-07,3|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,1.82829939739887,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0,0,0,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0.649094787309367,0.522389211897802,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0,1.25849830862972,0.825354125820202,0.208994966536811,0.516833518338658,1.77883131343355,0.66944122552934,1.20848795132744,0,1.95249646038536,0,0.81014194788176,0.446498641420399,0.44905874525234,0.450445921933289,0,0,0.366403487860815,0,0,0,0,0,1.05927344650575,0.573673241497627,0,0,0,0,0.622422070799533,0.67355336034844,0.817309515567294,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0.600952235626387,0.340296549480063,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0.975789649036763,1.32529768321485,0.813357600086629,0.829288440122964,1.26160425437814,0,1.56449532329816,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,1.96565443335525,1.18157981336281,0,2.09080345523293,0,0,0,0,0,0,0,0,0,0.117408694235822,2.30986316417718,0.462985512576611,1.14152491340759,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0.763976851116555,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.686286847621712,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.492762936082855,0.519254429183621,0.232420756919918,1.81289174387433,0.200506470303285,0,0,0,0.262248829918848,0.451199612907412,0,0,1.46139224653261,0.316654886678627,1.13733384070897,0.680374821106063,0.215915916102139,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0.290012154876366,0.308097234229289,0.307007349452259,0,0.429680979473094,0.290033387828457,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.731140468893853,0,0,0,0,0,0,0,3.47265320560013,0,0,0,0,0.143411352204052,0,0.35667105148125,0,1.47775344708365,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,0.659006605437454,0,0,0,0.22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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=220001 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26487 | |||
|TSSclassifier=S | |||
|UniProt=Q96DN2 | |||
|association_with_transcript=31bp_to_NM_152718,uc001nra.2,uc001nrb.2_5end | |||
|description=CAGE_peak_3_at_VWCE_5end | |||
|id=chr11:61062737..61062756,- | |||
|ontology_enrichment_celltype=CL:0000115!8.21e-13!35;CL:0002139!6.04e-12!24;CL:0002078!1.50e-11!44;CL:0000213!2.64e-08!57;CL:0000215!2.64e-08!57;CL:0002321!2.04e-07!248;CL:0000222!2.58e-07!119;CL:0000071!3.14e-07!18;CL:0002546!3.14e-07!18;CL:0005020!6.23e-07!6;CL:0002138!6.23e-07!6;CL:0005022!6.23e-07!6;CL:0000220!9.19e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.91e-12;12!CL:0000540;8.12e-07;6!CL:0000404;8.12e-07;6!CL:0002541;9.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.33e-12,12;CL:0000115,2.20e-07,36;CL:0002078,5.84e-07,45;CL:0000540,7.75e-07,6;CL:0000031,7.75e-07,6;CL:0000404,7.75e-07,6;CL:0002541,9.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.20e-10;11!UBERON:0009497;3.34e-08;13!CL:0000031;8.12e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.79e-07!118;UBERON:0001986!3.14e-07!18;UBERON:0004638!3.14e-07!18;UBERON:0004852!3.14e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.01e-13;19!UBERON:0006925;6.01e-13;19!UBERON:0002423;1.62e-09;25!UBERON:0002365;3.66e-07;31!UBERON:0002330;3.66e-07;31!UBERON:0003124;9.59e-07;3!UBERON:0000920;9.59e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.67e-13,19;UBERON:0006925,4.67e-13,19;UBERON:0008836,4.67e-13,19;UBERON:0008835,4.32e-11,22;UBERON:0003894,4.32e-11,22;UBERON:0009854,1.50e-10,23;UBERON:0007499,1.35e-09,25;UBERON:0009497,1.35e-09,25;UBERON:0000015,1.35e-09,25;UBERON:0002423,1.35e-09,25;UBERON:0006235,1.35e-09,25;UBERON:0004161,1.35e-09,25;UBERON:0009856,3.55e-09,26;UBERON:0005172,1.67e-08,54;UBERON:0005173,1.67e-08,54;UBERON:0002365,1.76e-07,31;UBERON:0002330,1.76e-07,31;UBERON:0002417,2.07e-07,60;UBERON:0000916,2.07e-07,60;UBERON:0003929,3.63e-07,54;UBERON:0000920,9.50e-07,3 | |||
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| |||
|short_description=p3@VWCE | |||
}} |
Revision as of 18:22, 10 September 2013
Short description: | p3@VWCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_VWCE_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_NM_152718, uc001nra.2, uc001nrb.2_5end |
EntrezGene: | VWCE |
HGNC: | 26487 |
UniProt: | Q96DN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.33e-12 | 12 |
endothelial cell | 2.20e-07 | 36 |
meso-epithelial cell | 5.84e-07 | 45 |
neuron | 7.75e-07 | 6 |
neuroblast | 7.75e-07 | 6 |
electrically signaling cell | 7.75e-07 | 6 |
chorionic membrane mesenchymal stem cell | 9.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.67e-13 | 19 |
digestive gland | 4.67e-13 | 19 |
liver bud | 4.67e-13 | 19 |
hepatic diverticulum | 4.32e-11 | 22 |
liver primordium | 4.32e-11 | 22 |
digestive tract diverticulum | 1.50e-10 | 23 |
epithelial sac | 1.35e-09 | 25 |
epithelium of foregut-midgut junction | 1.35e-09 | 25 |
anatomical boundary | 1.35e-09 | 25 |
hepatobiliary system | 1.35e-09 | 25 |
foregut-midgut junction | 1.35e-09 | 25 |
septum transversum | 1.35e-09 | 25 |
sac | 3.55e-09 | 26 |
abdomen element | 1.67e-08 | 54 |
abdominal segment element | 1.67e-08 | 54 |
exocrine gland | 1.76e-07 | 31 |
exocrine system | 1.76e-07 | 31 |
abdominal segment of trunk | 2.07e-07 | 60 |
abdomen | 2.07e-07 | 60 |
gut epithelium | 3.63e-07 | 54 |
egg chorion | 9.50e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.