FFCP PHASE1:Hg19::chr11:47664072..47664125,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17587 | |||
|TSSclassifier=S | |||
|UniProt=E9PNT8,F5H3Y2 | |||
|association_with_transcript=0bp_to_ENST00000530558,ENST00000542981,uc001nge.2_5end | |||
|description=CAGE_peak_1_at_MTCH2_5end | |||
|id=chr11:47664072..47664125,- | |||
|ontology_enrichment_celltype=CL:0000548!3.09e-27!679;CL:0000004!3.09e-27!679;CL:0000255!3.09e-27!679;CL:0000012!2.02e-26!682;CL:0000144!8.83e-25!625;CL:0000220!1.63e-24!246;CL:0002321!4.88e-24!248;CL:0002371!4.47e-23!591;CL:0000055!1.85e-21!180;CL:0000222!9.04e-17!119;CL:0000003!1.32e-13!722;CL:0000183!6.64e-11!59;CL:0000680!8.34e-11!57;CL:0000056!8.34e-11!57;CL:0000355!8.34e-11!57;CL:0000066!1.35e-10!254;CL:0000393!2.39e-10!60;CL:0000211!2.39e-10!60;CL:0000187!5.52e-10!54;CL:0000192!9.23e-10!42;CL:0000514!9.23e-10!42;CL:0000063!4.50e-09!578;CL:0000221!2.20e-08!71;CL:0000359!2.27e-07!32;CL:0000723!7.84e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.70e-07;32!CL:0000192;6.56e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.87e-24,250;CL:0000222,3.98e-17,121;CL:0000680,1.13e-10,58;CL:0000056,1.13e-10,58;CL:0000355,1.13e-10,58;CL:0000066,1.31e-10,253;CL:0000393,3.13e-10,61;CL:0000211,3.13e-10,61;CL:0000187,7.38e-10,55;CL:0000192,1.34e-09,43;CL:0000514,1.34e-09,43;CL:0000221,1.59e-08,72;CL:0000359,2.27e-07,32;CL:0000213,4.58e-07,58;CL:0000215,4.58e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;6.56e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@MTCH2 | |||
}} |
Revision as of 18:02, 10 September 2013
Short description: | p1@MTCH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MTCH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530558, ENST00000542981, uc001nge.2_5end |
EntrezGene: | MTCH2 |
HGNC: | 17587 |
UniProt: | E9PNT8F5H3Y2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.87e-24 | 250 |
mesodermal cell | 3.98e-17 | 121 |
muscle precursor cell | 1.13e-10 | 58 |
myoblast | 1.13e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.13e-10 | 58 |
epithelial cell | 1.31e-10 | 253 |
electrically responsive cell | 3.13e-10 | 61 |
electrically active cell | 3.13e-10 | 61 |
muscle cell | 7.38e-10 | 55 |
smooth muscle cell | 1.34e-09 | 43 |
smooth muscle myoblast | 1.34e-09 | 43 |
ectodermal cell | 1.59e-08 | 72 |
vascular associated smooth muscle cell | 2.27e-07 | 32 |
lining cell | 4.58e-07 | 58 |
barrier cell | 4.58e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 8.15e-13 | 78 |
unilaminar epithelium | 1.14e-11 | 148 |
somite | 1.91e-11 | 71 |
presomitic mesoderm | 1.91e-11 | 71 |
presumptive segmental plate | 1.91e-11 | 71 |
dermomyotome | 1.91e-11 | 71 |
trunk paraxial mesoderm | 1.91e-11 | 71 |
paraxial mesoderm | 5.75e-11 | 72 |
presumptive paraxial mesoderm | 5.75e-11 | 72 |
dense mesenchyme tissue | 8.31e-11 | 73 |
multilaminar epithelium | 3.26e-10 | 83 |
mesenchyme | 1.32e-09 | 160 |
entire embryonic mesenchyme | 1.32e-09 | 160 |
trunk mesenchyme | 2.80e-09 | 122 |
skeletal muscle tissue | 3.77e-09 | 62 |
striated muscle tissue | 3.77e-09 | 62 |
myotome | 3.77e-09 | 62 |
vasculature | 7.65e-09 | 78 |
vascular system | 7.65e-09 | 78 |
muscle tissue | 1.29e-08 | 64 |
musculature | 1.29e-08 | 64 |
musculature of body | 1.29e-08 | 64 |
trunk | 1.85e-08 | 199 |
epithelial tube | 1.99e-07 | 117 |
vessel | 2.45e-07 | 68 |
artery | 7.26e-07 | 42 |
arterial blood vessel | 7.26e-07 | 42 |
arterial system | 7.26e-07 | 42 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.