FFCP PHASE1:Hg19::chr11:35052343..35052374,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C6|description=CAGE_peak_at_chr11:35052343..35052374,-|id=chr11:35052343..35052374,-|ontology_enrichment_celltype=CL:0002057!1.04e-44!42;CL:0000860!1.25e-43!45;CL:0000557!1.39e-38!71;CL:0000766!4.41e-38!76;CL:0002009!5.74e-37!65;CL:0000839!8.97e-36!70;CL:0002194!5.51e-35!63;CL:0000576!5.51e-35!63;CL:0000040!5.51e-35!63;CL:0000559!5.51e-35!63;CL:0000738!1.48e-32!140;CL:0002031!1.84e-28!124;CL:0002087!2.19e-27!119;CL:0000037!9.89e-27!172;CL:0000566!9.89e-27!172;CL:0000763!1.22e-26!112;CL:0000049!1.22e-26!112;CL:0000988!6.04e-25!182;CL:0002032!3.99e-23!165;CL:0000837!3.99e-23!165;CL:0000134!3.01e-22!358;CL:0002320!5.38e-21!365;CL:0000219!9.75e-21!390;CL:0000034!5.08e-16!444;CL:0000723!7.16e-16!436;CL:0000048!7.49e-16!430;CL:0000063!4.97e-13!578;CL:0002371!1.46e-11!591;CL:0000012!2.02e-10!682;CL:0002393!1.03e-09!9;CL:0002397!1.03e-09!9;CL:0000144!1.13e-09!625;CL:0000548!1.40e-09!679;CL:0000004!1.40e-09!679;CL:0000255!1.40e-09!679;CL:0000003!5.17e-08!722|ontology_enrichment_celltype_v019=CL:0000860;2.74e-78;33!CL:0002057;2.74e-78;33!CL:0000473;4.60e-54;39!CL:0000234;4.60e-54;39!CL:0000576;9.70e-51;48!CL:0000766;4.19e-34;69!CL:0002393;7.25e-17;6!CL:0002397;7.25e-17;6!CL:0002087;2.26e-16;104!CL:0000763;2.86e-15;100!CL:0000738;7.66e-13;136!CL:0000767;1.12e-09;3!CL:0000226;4.46e-09;3!CL:0000842;4.46e-09;3!CL:0000623;1.81e-08;3!CL:0000784;2.79e-08;3!CL:0000219;4.28e-08;193!CL:0000988;5.51e-08;177|ontology_enrichment_celltype_v019_2=CL:0000860,3.26e-94,42;CL:0002057,3.26e-94,42;CL:0000473,5.09e-81,48;CL:0000234,5.09e-81,48;CL:0000557,9.37e-74,67;CL:0000766,1.19e-71,72;CL:0002009,1.21e-70,61;CL:0000839,6.11e-68,66;CL:0002194,5.11e-66,59;CL:0000576,5.11e-66,59;CL:0000040,5.11e-66,59;CL:0000559,5.11e-66,59;CL:0000738,5.62e-58,136;CL:0000763,2.43e-48,108;CL:0000049,2.43e-48,108;CL:0002031,6.10e-48,120;CL:0002087,4.78e-46,115;CL:0000037,3.39e-44,168;CL:0000988,3.26e-41,177;CL:0002032,1.19e-37,161;CL:0000837,1.19e-37,161;CL:0000134,6.29e-27,354;CL:0002320,4.29e-26,361;CL:0000219,3.69e-23,386;CL:0000034,2.85e-20,441;CL:0000048,1.44e-19,427;CL:0000723,4.50e-19,433;CL:0002393,5.01e-11,9;CL:0002397,5.01e-11,9;CL:0000767,1.12e-09,3;CL:0000226,4.66e-09,3;CL:0000842,4.66e-09,3;CL:0000623,1.49e-08,3;CL:0000825,1.49e-08,3;CL:0000784,2.27e-08,3|ontology_enrichment_development_v019=CL:0002057;1.38e-67;42!CL:0000049;7.30e-13;108|ontology_enrichment_disease=DOID:2394!2.06e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.25e-37!80;UBERON:0001474!3.76e-37!86;UBERON:0002390!2.31e-30!102;UBERON:0003061!2.31e-30!102;UBERON:0004765!3.19e-30!101;UBERON:0001434!3.19e-30!101;UBERON:0002193!2.73e-26!112;UBERON:0002405!1.43e-21!115;UBERON:0002384!6.68e-21!375;UBERON:0002204!9.40e-15!167;UBERON:0003081!2.93e-11!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-69,76;UBERON:0001474,9.91e-64,82;UBERON:0002390,3.21e-59,98;UBERON:0003061,3.21e-59,98;UBERON:0004765,5.41e-57,90;UBERON:0002405,9.18e-55,93;UBERON:0002193,1.49e-52,108;UBERON:0001434,4.46e-50,100;UBERON:0003081,1.93e-25,203;UBERON:0002204,4.71e-25,167;UBERON:0002384,5.87e-25,371;UBERON:0000926,1.07e-14,315;UBERON:0004120,1.07e-14,315;UBERON:0006603,1.07e-14,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,40.909884792286,24.1812520801244,37.7751340891225,0,0,0,0,0,0.293600439334847,142.930815401224,93.6542569685562,133.461685490249,0,0,0,3.19876125315042,1.13362783106643,4.60909716256851,16.0376035464922,5.34518254428373,14.865905802965,28.4815468398929,14.8573209786878,33.1075121844019,104.802686943932,51.6387746867061,79.9016270906616,7.15320890261898,2.72906150057846,9.43838634669355,66.4202046444859,41.07891546574,77.999129347483,2.96866170168044,4.9865914405408,5.11469700639233,53.9789183849166,20.425868088881,45.466024176677,20.3511418857962,8.86520961314342,27.1486055881396,27.848377121135,34.9863754188186,55.0644554147139,1.69004229049553,8.07896339867165,2.72556239160889,2.3589012540764,3.15371474967163,2.89306056054744,0.570025487482497,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,3.52342313622563,1.14681968437569,1.32171328579026,10.0891541336676,0,0.196709770113833,1.57204305099666,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.80642697289893,0.802320587350522,0.724122019413995,0,0,0,0,0,0,0,0.973269740605272,0,0,0.087834785693126,0,0,0,0,0,0.132957960518865,3.33886874027479,2.85997455390064,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,1.28820270022815,0,0.675105328965065,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr11:35052343..35052374,- | |||
|id=chr11:35052343..35052374,- | |||
|ontology_enrichment_celltype=CL:0002057!1.04e-44!42;CL:0000860!1.25e-43!45;CL:0000557!1.39e-38!71;CL:0000766!4.41e-38!76;CL:0002009!5.74e-37!65;CL:0000839!8.97e-36!70;CL:0002194!5.51e-35!63;CL:0000576!5.51e-35!63;CL:0000040!5.51e-35!63;CL:0000559!5.51e-35!63;CL:0000738!1.48e-32!140;CL:0002031!1.84e-28!124;CL:0002087!2.19e-27!119;CL:0000037!9.89e-27!172;CL:0000566!9.89e-27!172;CL:0000763!1.22e-26!112;CL:0000049!1.22e-26!112;CL:0000988!6.04e-25!182;CL:0002032!3.99e-23!165;CL:0000837!3.99e-23!165;CL:0000134!3.01e-22!358;CL:0002320!5.38e-21!365;CL:0000219!9.75e-21!390;CL:0000034!5.08e-16!444;CL:0000723!7.16e-16!436;CL:0000048!7.49e-16!430;CL:0000063!4.97e-13!578;CL:0002371!1.46e-11!591;CL:0000012!2.02e-10!682;CL:0002393!1.03e-09!9;CL:0002397!1.03e-09!9;CL:0000144!1.13e-09!625;CL:0000548!1.40e-09!679;CL:0000004!1.40e-09!679;CL:0000255!1.40e-09!679;CL:0000003!5.17e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.74e-78;33!CL:0002057;2.74e-78;33!CL:0000473;4.60e-54;39!CL:0000234;4.60e-54;39!CL:0000576;9.70e-51;48!CL:0000766;4.19e-34;69!CL:0002393;7.25e-17;6!CL:0002397;7.25e-17;6!CL:0002087;2.26e-16;104!CL:0000763;2.86e-15;100!CL:0000738;7.66e-13;136!CL:0000767;1.12e-09;3!CL:0000226;4.46e-09;3!CL:0000842;4.46e-09;3!CL:0000623;1.81e-08;3!CL:0000784;2.79e-08;3!CL:0000219;4.28e-08;193!CL:0000988;5.51e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.26e-94,42;CL:0002057,3.26e-94,42;CL:0000473,5.09e-81,48;CL:0000234,5.09e-81,48;CL:0000557,9.37e-74,67;CL:0000766,1.19e-71,72;CL:0002009,1.21e-70,61;CL:0000839,6.11e-68,66;CL:0002194,5.11e-66,59;CL:0000576,5.11e-66,59;CL:0000040,5.11e-66,59;CL:0000559,5.11e-66,59;CL:0000738,5.62e-58,136;CL:0000763,2.43e-48,108;CL:0000049,2.43e-48,108;CL:0002031,6.10e-48,120;CL:0002087,4.78e-46,115;CL:0000037,3.39e-44,168;CL:0000988,3.26e-41,177;CL:0002032,1.19e-37,161;CL:0000837,1.19e-37,161;CL:0000134,6.29e-27,354;CL:0002320,4.29e-26,361;CL:0000219,3.69e-23,386;CL:0000034,2.85e-20,441;CL:0000048,1.44e-19,427;CL:0000723,4.50e-19,433;CL:0002393,5.01e-11,9;CL:0002397,5.01e-11,9;CL:0000767,1.12e-09,3;CL:0000226,4.66e-09,3;CL:0000842,4.66e-09,3;CL:0000623,1.49e-08,3;CL:0000825,1.49e-08,3;CL:0000784,2.27e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-67;42!CL:0000049;7.30e-13;108 | |||
|ontology_enrichment_disease=DOID:2394!2.06e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-37!80;UBERON:0001474!3.76e-37!86;UBERON:0002390!2.31e-30!102;UBERON:0003061!2.31e-30!102;UBERON:0004765!3.19e-30!101;UBERON:0001434!3.19e-30!101;UBERON:0002193!2.73e-26!112;UBERON:0002405!1.43e-21!115;UBERON:0002384!6.68e-21!375;UBERON:0002204!9.40e-15!167;UBERON:0003081!2.93e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-69,76;UBERON:0001474,9.91e-64,82;UBERON:0002390,3.21e-59,98;UBERON:0003061,3.21e-59,98;UBERON:0004765,5.41e-57,90;UBERON:0002405,9.18e-55,93;UBERON:0002193,1.49e-52,108;UBERON:0001434,4.46e-50,100;UBERON:0003081,1.93e-25,203;UBERON:0002204,4.71e-25,167;UBERON:0002384,5.87e-25,371;UBERON:0000926,1.07e-14,315;UBERON:0004120,1.07e-14,315;UBERON:0006603,1.07e-14,315 | |||
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| |||
|short_description=p@chr11:35052343..35052374,- | |||
}} |
Revision as of 17:34, 10 September 2013
Short description: | p@chr11:35052343..35052374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:35052343..35052374, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.05e-69 | 76 |
bone element | 9.91e-64 | 82 |
hematopoietic system | 3.21e-59 | 98 |
blood island | 3.21e-59 | 98 |
skeletal element | 5.41e-57 | 90 |
immune system | 9.18e-55 | 93 |
hemolymphoid system | 1.49e-52 | 108 |
skeletal system | 4.46e-50 | 100 |
lateral plate mesoderm | 1.93e-25 | 203 |
musculoskeletal system | 4.71e-25 | 167 |
connective tissue | 5.87e-25 | 371 |
mesoderm | 1.07e-14 | 315 |
mesoderm-derived structure | 1.07e-14 | 315 |
presumptive mesoderm | 1.07e-14 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.