FFCP PHASE1:Hg19::chr11:22689648..22689665,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2620|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4167|TSSclassifier=S|UniProt=O43903,Q7Z3X8|association_with_transcript=0bp_to_ENST00000278187,ENST00000524701,NM_177553,uc001mqm.2,uc001mqn.2_5end|coexpression_cluster_id=C36|description=CAGE_peak_11_at_GAS2_5end|id=chr11:22689648..22689665,+|ontology_enrichment_celltype=CL:0000945!1.14e-07!24;CL:0000826!1.14e-07!24|ontology_enrichment_celltype_v019=CL:0000945;2.14e-17;24|ontology_enrichment_celltype_v019_2=CL:0000945,2.22e-17,24;CL:0000826,2.22e-17,24;CL:0000838,4.80e-08,52;CL:0000542,6.82e-08,53;CL:0000051,6.82e-08,53|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2355!8.67e-07!1|ontology_enrichment_disease_v019=DOID:2355;1.22e-17;1!DOID:74;1.71e-09;2!DOID:0060058;1.79e-07;10|ontology_enrichment_disease_v019_2=DOID:2355,1.03e-17,1;DOID:74,1.57e-09,2;DOID:0060058,1.85e-07,10|ontology_enrichment_uberon=UBERON:0001896!1.27e-15!3;UBERON:0005290!1.27e-15!3;UBERON:0010096!1.27e-15!3;UBERON:0000007!6.76e-12!2;UBERON:0007023!7.27e-12!115;UBERON:0003076!1.41e-11!15;UBERON:0003057!1.41e-11!15;UBERON:0002298!3.37e-10!8;UBERON:0001049!1.75e-08!57;UBERON:0005068!1.75e-08!57;UBERON:0006241!1.75e-08!57;UBERON:0007135!1.75e-08!57;UBERON:0001042!2.11e-08!10;UBERON:0009145!2.11e-08!10;UBERON:0003978!6.21e-08!3;UBERON:0009751!6.21e-08!3;UBERON:0000946!6.21e-08!3;UBERON:0002523!6.21e-08!3;UBERON:0005983!6.21e-08!3;UBERON:0002165!6.21e-08!3;UBERON:0002062!6.21e-08!3;UBERON:0007280!6.21e-08!3;UBERON:0002240!8.77e-08!3;UBERON:0006562!1.21e-07!11;UBERON:0003075!3.05e-07!86;UBERON:0007284!3.05e-07!86;UBERON:0004177!4.23e-07!7;UBERON:0005418!6.59e-07!1;UBERON:0001389!6.59e-07!1;UBERON:0000026!6.59e-07!1;UBERON:0008784!6.59e-07!1;UBERON:0006058!6.59e-07!1;UBERON:0003663!6.59e-07!1;UBERON:0001383!6.59e-07!1;UBERON:0004256!6.59e-07!1;UBERON:0002529!6.59e-07!1;UBERON:0004708!6.59e-07!1;UBERON:0002101!6.59e-07!1;UBERON:0004709!6.59e-07!1;UBERON:0003661!6.59e-07!1;UBERON:0002471!6.59e-07!1;UBERON:0004357!6.59e-07!1;UBERON:0009872!6.59e-07!1;UBERON:0004347!6.59e-07!1;UBERON:0005420!6.59e-07!1;UBERON:0005732!6.59e-07!1;UBERON:0006057!6.59e-07!1;UBERON:0000978!6.59e-07!1;UBERON:0002103!6.59e-07!1;UBERON:0001665!6.59e-07!1;UBERON:0003823!6.59e-07!1;UBERON:0000154!6.59e-07!1;UBERON:0005733!6.59e-07!1;UBERON:0005730!6.59e-07!1;UBERON:0004733!7.85e-07!12;UBERON:0002028!7.85e-07!12;UBERON:0007277!7.85e-07!12;UBERON:0002346!8.15e-07!90|ontology_enrichment_uberon_v019=UBERON:0000007;1.93e-33;2!UBERON:0001389;4.44e-18;1!UBERON:0000026;4.44e-18;1!UBERON:0008784;4.44e-18;1!UBERON:0006058;4.44e-18;1!UBERON:0003663;4.44e-18;1!UBERON:0004256;4.44e-18;1!UBERON:0004708;4.44e-18;1!UBERON:0002101;4.44e-18;1!UBERON:0004709;4.44e-18;1!UBERON:0002529;4.44e-18;1!UBERON:0010538;4.44e-18;1!UBERON:0003661;4.44e-18;1!UBERON:0010890;4.44e-18;1!UBERON:0002471;4.44e-18;1!UBERON:0001383;4.44e-18;1!UBERON:0010758;4.44e-18;1!UBERON:0010707;4.44e-18;1!UBERON:0000978;4.44e-18;1!UBERON:0002103;4.44e-18;1!UBERON:0001665;4.44e-18;1!UBERON:0003823;4.44e-18;1!UBERON:0000154;4.44e-18;1!UBERON:0010709;4.44e-18;1!UBERON:0003296;2.82e-17;4!UBERON:0010133;2.82e-17;4!UBERON:0001894;2.70e-10;7!UBERON:0005090;1.03e-09;2!UBERON:0001630;1.03e-09;2!UBERON:0002370;1.22e-09;2!UBERON:0005058;1.22e-09;2!UBERON:0009113;1.22e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.64e-33,2;UBERON:0005418,4.44e-18,1;UBERON:0001389,4.44e-18,1;UBERON:0000026,4.44e-18,1;UBERON:0008784,4.44e-18,1;UBERON:0006058,4.44e-18,1;UBERON:0003663,4.44e-18,1;UBERON:0004256,4.44e-18,1;UBERON:0004708,4.44e-18,1;UBERON:0002101,4.44e-18,1;UBERON:0004709,4.44e-18,1;UBERON:0002529,4.44e-18,1;UBERON:0010538,4.44e-18,1;UBERON:0003661,4.44e-18,1;UBERON:0010890,4.44e-18,1;UBERON:0002471,4.44e-18,1;UBERON:0001383,4.44e-18,1;UBERON:0004357,4.44e-18,1;UBERON:0004347,4.44e-18,1;UBERON:0005420,4.44e-18,1;UBERON:0005732,4.44e-18,1;UBERON:0010758,4.44e-18,1;UBERON:0010707,4.44e-18,1;UBERON:0000978,4.44e-18,1;UBERON:0002103,4.44e-18,1;UBERON:0001665,4.44e-18,1;UBERON:0003823,4.44e-18,1;UBERON:0000154,4.44e-18,1;UBERON:0010709,4.44e-18,1;UBERON:0005733,4.44e-18,1;UBERON:0005730,4.44e-18,1;UBERON:0003296,2.59e-17,4;UBERON:0010133,2.59e-17,4;UBERON:0001894,2.58e-10,7;UBERON:0006222,2.58e-10,7;UBERON:0005090,1.03e-09,2;UBERON:0001630,1.03e-09,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86395506676235,9.35946719729382,10.8620878212877,0,0,0,0,0,0,1.00707360754392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4167 | |||
|TSSclassifier=S | |||
|UniProt=O43903,Q7Z3X8 | |||
|association_with_transcript=0bp_to_ENST00000278187,ENST00000524701,NM_177553,uc001mqm.2,uc001mqn.2_5end | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_11_at_GAS2_5end | |||
|id=chr11:22689648..22689665,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.14e-07!24;CL:0000826!1.14e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.14e-17;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.22e-17,24;CL:0000826,2.22e-17,24;CL:0000838,4.80e-08,52;CL:0000542,6.82e-08,53;CL:0000051,6.82e-08,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2355!8.67e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.22e-17;1!DOID:74;1.71e-09;2!DOID:0060058;1.79e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.03e-17,1;DOID:74,1.57e-09,2;DOID:0060058,1.85e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001896!1.27e-15!3;UBERON:0005290!1.27e-15!3;UBERON:0010096!1.27e-15!3;UBERON:0000007!6.76e-12!2;UBERON:0007023!7.27e-12!115;UBERON:0003076!1.41e-11!15;UBERON:0003057!1.41e-11!15;UBERON:0002298!3.37e-10!8;UBERON:0001049!1.75e-08!57;UBERON:0005068!1.75e-08!57;UBERON:0006241!1.75e-08!57;UBERON:0007135!1.75e-08!57;UBERON:0001042!2.11e-08!10;UBERON:0009145!2.11e-08!10;UBERON:0003978!6.21e-08!3;UBERON:0009751!6.21e-08!3;UBERON:0000946!6.21e-08!3;UBERON:0002523!6.21e-08!3;UBERON:0005983!6.21e-08!3;UBERON:0002165!6.21e-08!3;UBERON:0002062!6.21e-08!3;UBERON:0007280!6.21e-08!3;UBERON:0002240!8.77e-08!3;UBERON:0006562!1.21e-07!11;UBERON:0003075!3.05e-07!86;UBERON:0007284!3.05e-07!86;UBERON:0004177!4.23e-07!7;UBERON:0005418!6.59e-07!1;UBERON:0001389!6.59e-07!1;UBERON:0000026!6.59e-07!1;UBERON:0008784!6.59e-07!1;UBERON:0006058!6.59e-07!1;UBERON:0003663!6.59e-07!1;UBERON:0001383!6.59e-07!1;UBERON:0004256!6.59e-07!1;UBERON:0002529!6.59e-07!1;UBERON:0004708!6.59e-07!1;UBERON:0002101!6.59e-07!1;UBERON:0004709!6.59e-07!1;UBERON:0003661!6.59e-07!1;UBERON:0002471!6.59e-07!1;UBERON:0004357!6.59e-07!1;UBERON:0009872!6.59e-07!1;UBERON:0004347!6.59e-07!1;UBERON:0005420!6.59e-07!1;UBERON:0005732!6.59e-07!1;UBERON:0006057!6.59e-07!1;UBERON:0000978!6.59e-07!1;UBERON:0002103!6.59e-07!1;UBERON:0001665!6.59e-07!1;UBERON:0003823!6.59e-07!1;UBERON:0000154!6.59e-07!1;UBERON:0005733!6.59e-07!1;UBERON:0005730!6.59e-07!1;UBERON:0004733!7.85e-07!12;UBERON:0002028!7.85e-07!12;UBERON:0007277!7.85e-07!12;UBERON:0002346!8.15e-07!90 | |||
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|short_description=p11@GAS2 | |||
}} |
Revision as of 17:15, 10 September 2013
Short description: | p11@GAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_GAS2_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 0bp_to_ENST00000278187, ENST00000524701, NM_177553, uc001mqm.2, uc001mqn.2_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | O43903Q7Z3X8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.22e-17 | 24 |
pro-B cell | 2.22e-17 | 24 |
lymphoid lineage restricted progenitor cell | 4.80e-08 | 52 |
lymphocyte | 6.82e-08 | 53 |
common lymphoid progenitor | 6.82e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.64e-33 | 2 |
hindlimb bud | 4.44e-18 | 1 |
soleus muscle | 4.44e-18 | 1 |
appendage | 4.44e-18 | 1 |
lower limb segment | 4.44e-18 | 1 |
multi-limb segment region | 4.44e-18 | 1 |
hindlimb muscle | 4.44e-18 | 1 |
hindlimb zeugopod muscle | 4.44e-18 | 1 |
paired limb/fin | 4.44e-18 | 1 |
limb | 4.44e-18 | 1 |
pelvic appendage | 4.44e-18 | 1 |
limb segment | 4.44e-18 | 1 |
paired limb/fin segment | 4.44e-18 | 1 |
limb muscle | 4.44e-18 | 1 |
pelvic complex muscle | 4.44e-18 | 1 |
zeugopod | 4.44e-18 | 1 |
muscle of leg | 4.44e-18 | 1 |
paired limb/fin bud | 4.44e-18 | 1 |
limb bud | 4.44e-18 | 1 |
pelvic appendage bud | 4.44e-18 | 1 |
limb/fin field | 4.44e-18 | 1 |
subdivision of organism along appendicular axis | 4.44e-18 | 1 |
appendage girdle complex | 4.44e-18 | 1 |
leg | 4.44e-18 | 1 |
hindlimb | 4.44e-18 | 1 |
triceps surae | 4.44e-18 | 1 |
hindlimb zeugopod | 4.44e-18 | 1 |
posterior region of body | 4.44e-18 | 1 |
pelvic complex | 4.44e-18 | 1 |
limb field | 4.44e-18 | 1 |
hindlimb/pelvic fin field | 4.44e-18 | 1 |
gland of diencephalon | 2.59e-17 | 4 |
neuroendocrine gland | 2.59e-17 | 4 |
diencephalon | 2.58e-10 | 7 |
future diencephalon | 2.58e-10 | 7 |
muscle structure | 1.03e-09 | 2 |
muscle organ | 1.03e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.03e-17 | 1 |
hematopoietic system disease | 1.57e-09 | 2 |
lymphoma | 1.85e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.