FFCP PHASE1:Hg19::chr11:123465441..123465484,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:123465441..123465484,+|id=chr11:123465441..123465484,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002593;3.34e-11;2|ontology_enrichment_celltype_v019_2=CL:0002593,4.52e-11,2|ontology_enrichment_development_v019=UBERON:0005754;5.16e-21;1!UBERON:0007297;3.34e-11;2!UBERON:0006215;6.78e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4556;5.01e-08;3|ontology_enrichment_disease_v019_2=DOID:4556,4.84e-08,3|ontology_enrichment_uberon=UBERON:0001049!1.16e-21!57;UBERON:0005068!1.16e-21!57;UBERON:0006241!1.16e-21!57;UBERON:0007135!1.16e-21!57;UBERON:0002020!9.45e-20!34;UBERON:0003528!9.45e-20!34;UBERON:0001869!1.61e-19!32;UBERON:0002616!5.81e-19!59;UBERON:0002780!2.43e-18!41;UBERON:0001890!2.43e-18!41;UBERON:0006240!2.43e-18!41;UBERON:0002619!2.53e-18!22;UBERON:0000955!4.94e-18!69;UBERON:0006238!4.94e-18!69;UBERON:0001893!5.75e-18!34;UBERON:0003080!1.02e-17!42;UBERON:0000956!1.78e-17!25;UBERON:0000203!1.78e-17!25;UBERON:0005743!1.94e-17!86;UBERON:0002791!3.86e-17!33;UBERON:0001017!1.56e-16!82;UBERON:0001950!1.11e-15!20;UBERON:0003075!2.01e-15!86;UBERON:0007284!2.01e-15!86;UBERON:0002346!3.48e-15!90;UBERON:0000073!1.16e-14!94;UBERON:0001016!1.16e-14!94;UBERON:0003056!6.60e-14!61;UBERON:0007023!1.50e-11!115;UBERON:0000033!1.43e-09!123;UBERON:0000153!1.25e-08!129;UBERON:0007811!1.25e-08!129;UBERON:0001737!9.76e-08!9;UBERON:0001872!1.10e-07!5;UBERON:0001871!3.89e-07!7|ontology_enrichment_uberon_v019=UBERON:0000998;5.16e-21;1!UBERON:0006868;5.16e-21;1!UBERON:0002771;2.12e-11;2!UBERON:0001905;3.34e-11;2!UBERON:0002757;3.34e-11;2!UBERON:0010134;3.34e-11;2!UBERON:0005408;3.34e-11;2!UBERON:0002456;3.34e-11;2!UBERON:0001899;3.34e-11;2!UBERON:0001950;3.12e-09;20!UBERON:0002619;1.76e-08;22!UBERON:0006947;6.78e-08;3!UBERON:0004054;6.78e-08;3!UBERON:0000956;1.44e-07;25!UBERON:0000203;1.44e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0000998,4.22e-21,1;UBERON:0006868,4.22e-21,1;UBERON:0002771,2.23e-11,2;UBERON:0001905,4.09e-11,2;UBERON:0002757,4.09e-11,2;UBERON:0010134,4.09e-11,2;UBERON:0005408,4.09e-11,2;UBERON:0001899,4.09e-11,2;UBERON:0002456,4.52e-11,2;UBERON:0000073,2.49e-09,53;UBERON:0002616,2.49e-09,53;UBERON:0001950,3.26e-09,20;UBERON:0001049,7.64e-09,56;UBERON:0005068,7.64e-09,56;UBERON:0006241,7.64e-09,56;UBERON:0007135,7.64e-09,56;UBERON:0002619,1.83e-08,22;UBERON:0002780,6.24e-08,41;UBERON:0001890,6.24e-08,41;UBERON:0003080,6.24e-08,41;UBERON:0006240,6.24e-08,41;UBERON:0006947,6.34e-08,3;UBERON:0004054,6.34e-08,3;UBERON:0000956,1.49e-07,25;UBERON:0000203,1.49e-07,25;UBERON:0000955,3.28e-07,68;UBERON:0006238,3.28e-07,68|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,1.94826728407911,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0,0.435758888184812,0.237270619111097,0,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0.222886768554957,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.723578631752448,1.52581736317083,0.774054819518572,0.886642856860642,0,0.10893846351899,0,0,0,0,0,0,0.319001159731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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:123465441..123465484,+ | |||
|id=chr11:123465441..123465484,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002593;3.34e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.16e-21;1!UBERON:0007297;3.34e-11;2!UBERON:0006215;6.78e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;5.01e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.84e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.16e-21!57;UBERON:0005068!1.16e-21!57;UBERON:0006241!1.16e-21!57;UBERON:0007135!1.16e-21!57;UBERON:0002020!9.45e-20!34;UBERON:0003528!9.45e-20!34;UBERON:0001869!1.61e-19!32;UBERON:0002616!5.81e-19!59;UBERON:0002780!2.43e-18!41;UBERON:0001890!2.43e-18!41;UBERON:0006240!2.43e-18!41;UBERON:0002619!2.53e-18!22;UBERON:0000955!4.94e-18!69;UBERON:0006238!4.94e-18!69;UBERON:0001893!5.75e-18!34;UBERON:0003080!1.02e-17!42;UBERON:0000956!1.78e-17!25;UBERON:0000203!1.78e-17!25;UBERON:0005743!1.94e-17!86;UBERON:0002791!3.86e-17!33;UBERON:0001017!1.56e-16!82;UBERON:0001950!1.11e-15!20;UBERON:0003075!2.01e-15!86;UBERON:0007284!2.01e-15!86;UBERON:0002346!3.48e-15!90;UBERON:0000073!1.16e-14!94;UBERON:0001016!1.16e-14!94;UBERON:0003056!6.60e-14!61;UBERON:0007023!1.50e-11!115;UBERON:0000033!1.43e-09!123;UBERON:0000153!1.25e-08!129;UBERON:0007811!1.25e-08!129;UBERON:0001737!9.76e-08!9;UBERON:0001872!1.10e-07!5;UBERON:0001871!3.89e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;5.16e-21;1!UBERON:0006868;5.16e-21;1!UBERON:0002771;2.12e-11;2!UBERON:0001905;3.34e-11;2!UBERON:0002757;3.34e-11;2!UBERON:0010134;3.34e-11;2!UBERON:0005408;3.34e-11;2!UBERON:0002456;3.34e-11;2!UBERON:0001899;3.34e-11;2!UBERON:0001950;3.12e-09;20!UBERON:0002619;1.76e-08;22!UBERON:0006947;6.78e-08;3!UBERON:0004054;6.78e-08;3!UBERON:0000956;1.44e-07;25!UBERON:0000203;1.44e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,4.22e-21,1;UBERON:0006868,4.22e-21,1;UBERON:0002771,2.23e-11,2;UBERON:0001905,4.09e-11,2;UBERON:0002757,4.09e-11,2;UBERON:0010134,4.09e-11,2;UBERON:0005408,4.09e-11,2;UBERON:0001899,4.09e-11,2;UBERON:0002456,4.52e-11,2;UBERON:0000073,2.49e-09,53;UBERON:0002616,2.49e-09,53;UBERON:0001950,3.26e-09,20;UBERON:0001049,7.64e-09,56;UBERON:0005068,7.64e-09,56;UBERON:0006241,7.64e-09,56;UBERON:0007135,7.64e-09,56;UBERON:0002619,1.83e-08,22;UBERON:0002780,6.24e-08,41;UBERON:0001890,6.24e-08,41;UBERON:0003080,6.24e-08,41;UBERON:0006240,6.24e-08,41;UBERON:0006947,6.34e-08,3;UBERON:0004054,6.34e-08,3;UBERON:0000956,1.49e-07,25;UBERON:0000203,1.49e-07,25;UBERON:0000955,3.28e-07,68;UBERON:0006238,3.28e-07,68 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,1.94826728407911,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0,0.435758888184812,0.237270619111097,0,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0.222886768554957,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.723578631752448,1.52581736317083,0.774054819518572,0.886642856860642,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0,0.19351266257817,0.146178634172371,0.246346371159628,0,0,0.225980740780532,0,0,0,0,0.240476460754601,0,0,0,0,0,0.432164393964449,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,2.51002275065983,0,0,0,0,0,0,0,0,0,1.19271615249795,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,2.07444650333337,0.500763722825999,0,0.221858103073705,0,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0.638535436228605,3.07674546361133,0.756215088665154,0.276629009856872,0.807378228159255,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0.0752103283492573,0,0,0,0.327543835020193,0,0.135075169236789,0.781078098613847,0.620060389503552,0.0634158101939068,1.09394961803644,0,0,0,0,1.07140367175657,0,0,0,0,0.230467975111559,0.171488009437418,0.135939465953663,0.197318320688547,0.354581522651905,0,0,0.471346769748006,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0.301925687133347,0.231522474323834,0.218559560503957,0,0,0,0,0,0.8453114551668,0.339854229375634,0,0,0,0,0,0,0,0.458729283404541,0,0,0.339957450954573,0.436350690340377,0.5290268405154,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0.404234377916439,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:123465441..123465484,+ | |||
}} |
Revision as of 16:22, 10 September 2013
Short description: | p@chr11:123465441..123465484, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:123465441..123465484, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 4.22e-21 | 1 |
seminal fluid secreting gland | 4.22e-21 | 1 |
middle temporal gyrus | 2.23e-11 | 2 |
pineal body | 4.09e-11 | 2 |
regional part of epithalamus | 4.09e-11 | 2 |
secretory circumventricular organ | 4.09e-11 | 2 |
circumventricular organ | 4.09e-11 | 2 |
epithalamus | 4.09e-11 | 2 |
internal thoracic artery | 4.52e-11 | 2 |
regional part of nervous system | 2.49e-09 | 53 |
regional part of brain | 2.49e-09 | 53 |
neocortex | 3.26e-09 | 20 |
neural tube | 7.64e-09 | 56 |
neural rod | 7.64e-09 | 56 |
future spinal cord | 7.64e-09 | 56 |
neural keel | 7.64e-09 | 56 |
regional part of cerebral cortex | 1.83e-08 | 22 |
regional part of forebrain | 6.24e-08 | 41 |
forebrain | 6.24e-08 | 41 |
anterior neural tube | 6.24e-08 | 41 |
future forebrain | 6.24e-08 | 41 |
male genital duct | 6.34e-08 | 3 |
internal male genitalia | 6.34e-08 | 3 |
cerebral cortex | 1.49e-07 | 25 |
pallium | 1.49e-07 | 25 |
brain | 3.28e-07 | 68 |
future brain | 3.28e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.84e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.