FFCP PHASE1:Hg19::chr11:119291603..119291653,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7070|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11801|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_uc001pwq.2_5end|coexpression_cluster_id=C879|description=CAGE_peak_4_at_THY1_5end|id=chr11:119291603..119291653,-|ontology_enrichment_celltype=CL:0000055!1.43e-19!180;CL:0000057!2.95e-18!75;CL:0002620!7.76e-10!23|ontology_enrichment_celltype_v019=CL:0002620;3.98e-07;23!CL:0000135;9.48e-07;3!CL:0000388;9.48e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,9.41e-12,76;CL:0002620,3.88e-07,23;CL:0000135,8.80e-07,3;CL:0000388,8.80e-07,3;CL:0000136,9.35e-07,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.45e-24!57;UBERON:0005068!4.45e-24!57;UBERON:0006241!4.45e-24!57;UBERON:0007135!4.45e-24!57;UBERON:0001017!2.00e-21!82;UBERON:0002616!5.77e-21!59;UBERON:0003080!2.28e-20!42;UBERON:0000955!3.81e-20!69;UBERON:0006238!3.81e-20!69;UBERON:0005743!4.16e-20!86;UBERON:0002780!5.83e-20!41;UBERON:0001890!5.83e-20!41;UBERON:0006240!5.83e-20!41;UBERON:0002020!1.22e-19!34;UBERON:0003528!1.22e-19!34;UBERON:0001893!7.65e-19!34;UBERON:0001869!8.28e-19!32;UBERON:0002791!3.06e-18!33;UBERON:0000073!9.00e-18!94;UBERON:0001016!9.00e-18!94;UBERON:0002346!1.45e-17!90;UBERON:0003075!2.10e-17!86;UBERON:0007284!2.10e-17!86;UBERON:0000475!2.61e-16!365;UBERON:0000033!8.37e-16!123;UBERON:0002619!7.35e-15!22;UBERON:0003056!1.59e-14!61;UBERON:0000153!2.56e-14!129;UBERON:0007811!2.56e-14!129;UBERON:0000956!3.78e-14!25;UBERON:0000203!3.78e-14!25;UBERON:0001950!2.73e-13!20;UBERON:0007023!1.84e-11!115;UBERON:0000924!3.05e-11!173;UBERON:0006601!3.05e-11!173;UBERON:0004121!6.07e-11!169;UBERON:0001871!3.01e-07!7;UBERON:0000914!3.45e-07!83;UBERON:0002329!3.45e-07!83;UBERON:0003077!3.45e-07!83;UBERON:0003059!3.45e-07!83;UBERON:0007282!3.45e-07!83;UBERON:0009618!3.45e-07!83;UBERON:0007285!3.45e-07!83;UBERON:0002420!3.67e-07!9;UBERON:0007245!3.67e-07!9;UBERON:0010009!3.67e-07!9;UBERON:0010011!3.67e-07!9;UBERON:0000454!3.67e-07!9;UBERON:0002308!5.29e-07!9;UBERON:0000125!5.29e-07!9;UBERON:0000025!7.92e-07!194|ontology_enrichment_uberon_v019=UBERON:0001869;5.19e-18;32!UBERON:0003528;2.03e-17;34!UBERON:0002020;2.03e-17;34!UBERON:0002619;5.98e-17;22!UBERON:0002791;3.68e-16;32!UBERON:0001893;8.64e-16;34!UBERON:0002780;9.54e-15;41!UBERON:0001890;9.54e-15;41!UBERON:0000956;1.96e-14;25!UBERON:0000203;1.96e-14;25!UBERON:0001950;3.37e-14;20!UBERON:0000200;1.12e-10;6!UBERON:0001871;6.67e-09;6!UBERON:0000073;2.79e-08;53!UBERON:0002616;2.79e-08;53!UBERON:0001017;2.27e-07;75!UBERON:0002420;3.01e-07;9!UBERON:0007245;3.01e-07;9!UBERON:0010009;3.01e-07;9!UBERON:0010011;3.01e-07;9!UBERON:0000454;3.01e-07;9!UBERON:0000955;3.64e-07;68!UBERON:0000125;4.98e-07;9!UBERON:0002308;4.98e-07;9!UBERON:0007846;9.48e-07;3!UBERON:0000043;9.48e-07;3!UBERON:0007845;9.48e-07;3!UBERON:0005383;9.48e-07;3!UBERON:0005382;9.48e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.14e-20,41;UBERON:0001890,2.14e-20,41;UBERON:0003080,2.14e-20,41;UBERON:0006240,2.14e-20,41;UBERON:0003528,6.86e-20,34;UBERON:0002020,6.86e-20,34;UBERON:0001869,2.95e-19,32;UBERON:0001893,8.91e-18,34;UBERON:0002791,1.86e-17,32;UBERON:0000073,5.39e-17,53;UBERON:0002616,5.39e-17,53;UBERON:0001049,5.78e-17,56;UBERON:0005068,5.78e-17,56;UBERON:0006241,5.78e-17,56;UBERON:0007135,5.78e-17,56;UBERON:0002619,7.51e-17,22;UBERON:0001017,3.94e-15,81;UBERON:0000956,2.38e-14,25;UBERON:0000203,2.38e-14,25;UBERON:0001950,4.16e-14,20;UBERON:0001016,1.39e-13,89;UBERON:0003056,1.53e-13,61;UBERON:0000955,1.69e-13,68;UBERON:0006238,1.69e-13,68;UBERON:0003075,9.15e-12,82;UBERON:0007284,9.15e-12,82;UBERON:0002346,7.91e-11,86;UBERON:0000200,1.63e-10,6;UBERON:0001871,6.55e-09,6;UBERON:0010314,8.69e-09,132;UBERON:0010371,2.98e-08,104;UBERON:0002420,2.84e-07,9;UBERON:0007245,2.84e-07,9;UBERON:0010009,2.84e-07,9;UBERON:0010011,2.84e-07,9;UBERON:0000454,2.84e-07,9;UBERON:0000125,4.78e-07,9;UBERON:0002308,4.78e-07,9;UBERON:0007846,8.80e-07,3;UBERON:0000043,8.80e-07,3;UBERON:0007845,8.80e-07,3|phase1_expression=1.09007027562334,6.63711624062048,0.422863212287913,6.00439790118782,3.5756887554183,4.36169262050184,0,0,4.96252693579693,0,0,0.218441372130172,0.263766978228454,0.247532705920093,1.32558950291166,1.34465029290355,0.602694528023977,0,0.975865597581014,0.492484232307152,0.816002764977012,0.626909442956176,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,2.17269778441236,0,1.45990461090791,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.397227542439656,2.86836620748814,1.06400514659507,0,0,0.24666754841716,0,0,0,0,0,0,0.62432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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7070 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11801 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001pwq.2_5end | |||
|coexpression_cluster_id=C879 | |||
|description=CAGE_peak_4_at_THY1_5end | |||
|id=chr11:119291603..119291653,- | |||
|ontology_enrichment_celltype=CL:0000055!1.43e-19!180;CL:0000057!2.95e-18!75;CL:0002620!7.76e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.98e-07;23!CL:0000135;9.48e-07;3!CL:0000388;9.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.41e-12,76;CL:0002620,3.88e-07,23;CL:0000135,8.80e-07,3;CL:0000388,8.80e-07,3;CL:0000136,9.35e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.45e-24!57;UBERON:0005068!4.45e-24!57;UBERON:0006241!4.45e-24!57;UBERON:0007135!4.45e-24!57;UBERON:0001017!2.00e-21!82;UBERON:0002616!5.77e-21!59;UBERON:0003080!2.28e-20!42;UBERON:0000955!3.81e-20!69;UBERON:0006238!3.81e-20!69;UBERON:0005743!4.16e-20!86;UBERON:0002780!5.83e-20!41;UBERON:0001890!5.83e-20!41;UBERON:0006240!5.83e-20!41;UBERON:0002020!1.22e-19!34;UBERON:0003528!1.22e-19!34;UBERON:0001893!7.65e-19!34;UBERON:0001869!8.28e-19!32;UBERON:0002791!3.06e-18!33;UBERON:0000073!9.00e-18!94;UBERON:0001016!9.00e-18!94;UBERON:0002346!1.45e-17!90;UBERON:0003075!2.10e-17!86;UBERON:0007284!2.10e-17!86;UBERON:0000475!2.61e-16!365;UBERON:0000033!8.37e-16!123;UBERON:0002619!7.35e-15!22;UBERON:0003056!1.59e-14!61;UBERON:0000153!2.56e-14!129;UBERON:0007811!2.56e-14!129;UBERON:0000956!3.78e-14!25;UBERON:0000203!3.78e-14!25;UBERON:0001950!2.73e-13!20;UBERON:0007023!1.84e-11!115;UBERON:0000924!3.05e-11!173;UBERON:0006601!3.05e-11!173;UBERON:0004121!6.07e-11!169;UBERON:0001871!3.01e-07!7;UBERON:0000914!3.45e-07!83;UBERON:0002329!3.45e-07!83;UBERON:0003077!3.45e-07!83;UBERON:0003059!3.45e-07!83;UBERON:0007282!3.45e-07!83;UBERON:0009618!3.45e-07!83;UBERON:0007285!3.45e-07!83;UBERON:0002420!3.67e-07!9;UBERON:0007245!3.67e-07!9;UBERON:0010009!3.67e-07!9;UBERON:0010011!3.67e-07!9;UBERON:0000454!3.67e-07!9;UBERON:0002308!5.29e-07!9;UBERON:0000125!5.29e-07!9;UBERON:0000025!7.92e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.19e-18;32!UBERON:0003528;2.03e-17;34!UBERON:0002020;2.03e-17;34!UBERON:0002619;5.98e-17;22!UBERON:0002791;3.68e-16;32!UBERON:0001893;8.64e-16;34!UBERON:0002780;9.54e-15;41!UBERON:0001890;9.54e-15;41!UBERON:0000956;1.96e-14;25!UBERON:0000203;1.96e-14;25!UBERON:0001950;3.37e-14;20!UBERON:0000200;1.12e-10;6!UBERON:0001871;6.67e-09;6!UBERON:0000073;2.79e-08;53!UBERON:0002616;2.79e-08;53!UBERON:0001017;2.27e-07;75!UBERON:0002420;3.01e-07;9!UBERON:0007245;3.01e-07;9!UBERON:0010009;3.01e-07;9!UBERON:0010011;3.01e-07;9!UBERON:0000454;3.01e-07;9!UBERON:0000955;3.64e-07;68!UBERON:0000125;4.98e-07;9!UBERON:0002308;4.98e-07;9!UBERON:0007846;9.48e-07;3!UBERON:0000043;9.48e-07;3!UBERON:0007845;9.48e-07;3!UBERON:0005383;9.48e-07;3!UBERON:0005382;9.48e-07;3 | |||
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| |||
|short_description=p4@THY1 | |||
}} |
Revision as of 16:09, 10 September 2013
Short description: | p4@THY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_THY1_5end |
Coexpression cluster: | C879_Osteoblast_Adipocyte_Olfactory_leiomyoma_Smooth_tenocyte_Fibroblast |
Association with transcript: | 0bp_to_uc001pwq.2_5end |
EntrezGene: | THY1 |
HGNC: | 11801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.41e-12 | 76 |
skin fibroblast | 3.88e-07 | 23 |
fibrocyte | 8.80e-07 | 3 |
tendon cell | 8.80e-07 | 3 |
fat cell | 9.35e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.