FFCP PHASE1:Hg19::chr11:119289671..119289701,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7070|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=11801|TSSclassifier=N|UniProt=Q9HBB0|association_with_transcript=-185bp_to_AK314018_5end|coexpression_cluster_id=C879|description=CAGE_peak_10_at_THY1_5end|id=chr11:119289671..119289701,-|ontology_enrichment_celltype=CL:0000055!2.94e-25!180;CL:0000057!7.66e-17!75;CL:0002334!3.52e-08!12;CL:0002620!8.62e-08!23|ontology_enrichment_celltype_v019=CL:0000136;1.06e-10;13!CL:0002521;4.80e-10;3!CL:0002334;1.89e-08;12!CL:0002617;3.58e-07;2|ontology_enrichment_celltype_v019_2=CL:0000057,7.23e-12,76;CL:0000136,1.39e-11,15;CL:0002521,4.70e-10,3;CL:0000048,1.73e-09,427;CL:0000723,3.53e-09,433;CL:0000034,8.88e-09,441;CL:0002334,1.08e-08,12;CL:0000134,9.90e-08,354;CL:0002320,2.25e-07,361;CL:0002617,5.10e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!6.70e-10!365;UBERON:0001017!2.36e-09!82;UBERON:0000914!4.48e-09!83;UBERON:0002329!4.48e-09!83;UBERON:0003077!4.48e-09!83;UBERON:0003059!4.48e-09!83;UBERON:0007282!4.48e-09!83;UBERON:0009618!4.48e-09!83;UBERON:0007285!4.48e-09!83;UBERON:0001049!1.28e-08!57;UBERON:0005068!1.28e-08!57;UBERON:0006241!1.28e-08!57;UBERON:0007135!1.28e-08!57;UBERON:0005743!2.60e-08!86;UBERON:0001869!4.06e-08!32;UBERON:0000955!5.62e-08!69;UBERON:0006238!5.62e-08!69;UBERON:0002616!6.92e-08!59;UBERON:0001893!7.71e-08!34;UBERON:0002020!1.02e-07!34;UBERON:0003528!1.02e-07!34;UBERON:0004290!1.27e-07!70;UBERON:0002199!1.50e-07!45;UBERON:0002416!1.50e-07!45;UBERON:0002780!2.18e-07!41;UBERON:0001890!2.18e-07!41;UBERON:0006240!2.18e-07!41;UBERON:0002791!2.19e-07!33;UBERON:0003080!4.92e-07!42;UBERON:0003102!6.27e-07!95;UBERON:0001013!6.95e-07!14;UBERON:0000073!7.29e-07!94;UBERON:0001016!7.29e-07!94|ontology_enrichment_uberon_v019=UBERON:0002190;4.80e-10;3!UBERON:0002072;5.11e-10;5!UBERON:0001013;1.15e-09;14|ontology_enrichment_uberon_v019_2=UBERON:0002072,3.66e-10,5;UBERON:0002190,4.70e-10,3;UBERON:0001013,1.11e-09,14;UBERON:0003102,6.58e-07,99;UBERON:0002384,6.86e-07,371|phase1_expression=1.09007027562334,4.92431204949261,0.422863212287913,1.0007329835313,2.68176656656373,0.872338524100369,2.53299878168311,1.26343974685366,5.48489819219661,0,0,0,0,0.37129905888014,0.994192127183747,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0,0.204000691244253,0.940364164434263,0,0.821246550437305,0.627713197974014,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.361439152384566,2.00535164254356,3.0417768981773,0.795285947051099,3.40644409211845,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,2.29469296599051,1.06400514659507,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,0.816616685019573,1.59684612505298,0.516628905878827,1.18800285728205,1.97813543422845,0,2.87447256726495,0.336672227908132,0.500474079487857,0,1.31693286264251,3.0648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0.640672166455702,1.27159140695737,0.600182192168805,1.03052529238439,0.257640540045629,0.930584281657949,0.506328996723799,0.68205903612839,0,1.38074847963449,0.323292113637624,0.710019185033229,0.604512589365842,1.01736355386293,0,0,0,0.975789649036763,0,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,1.56449532329816,0,1.38134921352481,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,3.57656445851882,0,0,1.04007436911366,0.257207374262142,0,0,0.285955987316295,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.799783929456456,0,0,0,0,0,0,0.434343920002738,0.821905290201534,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,3.11956292296211,7.13715955188647,0.946214490203608,1.40569697991256,0.902838299183157,13.6444502433591,1.03473071292505,1.32845119707087,0.737476674166813,0.260650843404249,0.195801157462741,0.686286847621712,0,0,0,0,0,0.907170879989041,1.48864684691266,0.306923946576125,2.80660094433074,0.640695746278505,1.53512174720011,0.965123526861645,0,1.54209693802656,0.710246901252508,0.328508624055237,2.07701771673448,2.67283870457906,0,0,0,0.918515585316854,0.182091168006717,1.18011973463482,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.551346289938122,0.107420244868274,0.580066775656914,0.255679882248303,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0.19063019392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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7070 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11801 | |||
|TSSclassifier=N | |||
|UniProt=Q9HBB0 | |||
|association_with_transcript=-185bp_to_AK314018_5end | |||
|coexpression_cluster_id=C879 | |||
|description=CAGE_peak_10_at_THY1_5end | |||
|id=chr11:119289671..119289701,- | |||
|ontology_enrichment_celltype=CL:0000055!2.94e-25!180;CL:0000057!7.66e-17!75;CL:0002334!3.52e-08!12;CL:0002620!8.62e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.06e-10;13!CL:0002521;4.80e-10;3!CL:0002334;1.89e-08;12!CL:0002617;3.58e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.23e-12,76;CL:0000136,1.39e-11,15;CL:0002521,4.70e-10,3;CL:0000048,1.73e-09,427;CL:0000723,3.53e-09,433;CL:0000034,8.88e-09,441;CL:0002334,1.08e-08,12;CL:0000134,9.90e-08,354;CL:0002320,2.25e-07,361;CL:0002617,5.10e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.70e-10!365;UBERON:0001017!2.36e-09!82;UBERON:0000914!4.48e-09!83;UBERON:0002329!4.48e-09!83;UBERON:0003077!4.48e-09!83;UBERON:0003059!4.48e-09!83;UBERON:0007282!4.48e-09!83;UBERON:0009618!4.48e-09!83;UBERON:0007285!4.48e-09!83;UBERON:0001049!1.28e-08!57;UBERON:0005068!1.28e-08!57;UBERON:0006241!1.28e-08!57;UBERON:0007135!1.28e-08!57;UBERON:0005743!2.60e-08!86;UBERON:0001869!4.06e-08!32;UBERON:0000955!5.62e-08!69;UBERON:0006238!5.62e-08!69;UBERON:0002616!6.92e-08!59;UBERON:0001893!7.71e-08!34;UBERON:0002020!1.02e-07!34;UBERON:0003528!1.02e-07!34;UBERON:0004290!1.27e-07!70;UBERON:0002199!1.50e-07!45;UBERON:0002416!1.50e-07!45;UBERON:0002780!2.18e-07!41;UBERON:0001890!2.18e-07!41;UBERON:0006240!2.18e-07!41;UBERON:0002791!2.19e-07!33;UBERON:0003080!4.92e-07!42;UBERON:0003102!6.27e-07!95;UBERON:0001013!6.95e-07!14;UBERON:0000073!7.29e-07!94;UBERON:0001016!7.29e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;4.80e-10;3!UBERON:0002072;5.11e-10;5!UBERON:0001013;1.15e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,3.66e-10,5;UBERON:0002190,4.70e-10,3;UBERON:0001013,1.11e-09,14;UBERON:0003102,6.58e-07,99;UBERON:0002384,6.86e-07,371 | |||
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| |||
|short_description=p10@THY1 | |||
}} |
Revision as of 16:09, 10 September 2013
Short description: | p10@THY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_THY1_5end |
Coexpression cluster: | C879_Osteoblast_Adipocyte_Olfactory_leiomyoma_Smooth_tenocyte_Fibroblast |
Association with transcript: | -185bp_to_AK314018_5end |
EntrezGene: | THY1 |
HGNC: | 11801 |
UniProt: | Q9HBB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.23e-12 | 76 |
fat cell | 1.39e-11 | 15 |
subcutaneous fat cell | 4.70e-10 | 3 |
multi fate stem cell | 1.73e-09 | 427 |
somatic stem cell | 3.53e-09 | 433 |
stem cell | 8.88e-09 | 441 |
preadipocyte | 1.08e-08 | 12 |
mesenchymal cell | 9.90e-08 | 354 |
connective tissue cell | 2.25e-07 | 361 |
adipocyte of breast | 5.10e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 3.66e-10 | 5 |
subcutaneous adipose tissue | 4.70e-10 | 3 |
adipose tissue | 1.11e-09 | 14 |
surface structure | 6.58e-07 | 99 |
connective tissue | 6.86e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.