FFCP PHASE1:Hg19::chr11:118781361..118781392,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100616376|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=41563|TSSclassifier=S|UniProt=|association_with_transcript=-24bp_to_NR_039713_5end|description=CAGE_peak_1_at_MIR4492_5end|id=chr11:118781361..118781392,+|ontology_enrichment_celltype=CL:0000066!2.80e-22!254;CL:0000548!4.45e-18!679;CL:0000004!4.45e-18!679;CL:0000255!4.45e-18!679;CL:0000012!2.79e-17!682;CL:0002321!3.40e-15!248;CL:0000220!1.75e-14!246;CL:0000055!1.69e-13!180;CL:0000003!1.97e-13!722;CL:0000144!8.92e-08!625;CL:0000076!1.61e-07!62;CL:0000222!5.34e-07!119;CL:0000057!5.61e-07!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,1.72e-14,253;CL:0002321,5.81e-07,250|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.17e-10!106;DOID:0050687!9.39e-10!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.88e-08,106;DOID:0050687,1.11e-07,143|ontology_enrichment_uberon=UBERON:0002100!1.69e-13!216;UBERON:0003104!2.45e-12!238;UBERON:0009142!2.45e-12!238;UBERON:0005256!8.96e-10!143;UBERON:0000475!3.73e-08!365;UBERON:0000481!5.76e-08!347;UBERON:0000490!9.42e-08!138;UBERON:0004119!1.18e-07!169;UBERON:0000925!1.18e-07!169;UBERON:0006595!1.18e-07!169;UBERON:0003914!1.22e-07!118;UBERON:0000077!2.80e-07!130;UBERON:0000119!5.33e-07!312|ontology_enrichment_uberon_v019=UBERON:0001737;2.97e-07;9!UBERON:0001557;2.97e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.82e-08,9;UBERON:0002100,1.52e-07,199;UBERON:0004119,4.50e-07,160;UBERON:0000925,4.50e-07,160;UBERON:0006595,4.50e-07,160;UBERON:0001048,5.89e-07,160|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,1.0007329835313,0.893922188854576,0,0,0,0.522371256399677,0.982935746006035,16.0494268633658,1.09220686065086,1.58260186937072,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.975865597581014,1.35433163884467,2.24400760368678,3.13454721478088,0.572471974262113,1.36874425072884,1.63205431473244,0,0,0,0,0.383829398097213,0.309632246632152,6.43594857135249,3.614471025339,1.47901604066715,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0.802622484269139,1.04535523804977,0,0.383220493601921,0.34362744548263,0.506039384039006,0.318565414324097,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0,0.821127996921047,0.201606743224732,0.267440195783507,0.289648807765598,2.43806866313962,0.670700859703636,0,0,2.00535164254356,0,0.795285947051099,0,0.283604451492204,1.55210578223795,0.966182642624386,0.0654895377488563,2.91436230634034,0.741568885568859,0,0,0,0,0.571994910780128,0.371457501329565,0.596287222100115,0.860234595106124,1.04142150482278,1.13061588384802,0.419499436209906,1.6507082516404,1.67195973229448,0,0,0,0,0.760272105718513,0.24406205754817,0,1.62028389576352,0.357198913136319,0,0.563057402416611,1.53316637465883,0.949265659568129,0.916008719652036,0,0,1.3082821564276,0,0.12663051166458,0.926864265692532,0.286836620748814,0.709336764396714,1.12135520028461,3.20246987189115,1.48000529050296,1.24484414159907,0.269421344139376,0.653847612453835,1.81628913173918,0.576175924479999,0.70296429550139,0,1.1409436430889,0.149448680551801,1.40921398372518,1.61872944368132,2.10676210053373,0.204154171254893,1.10550885580591,0.619954687054593,1.18800285728205,0.989067717114227,0.910161361938026,3.59309070908119,0.505008341862199,1.7516592782075,0.554128230968366,0.438977620880838,1.5324389789951,1.20190447125277,0.113432183160021,0.89694817844431,1.06778694409284,0.423863802319124,0.600182192168805,0.309157587715317,0.257640540045629,0.558350568994769,0.506328996723799,0.876933046450788,0.504867548488229,0.828449087780694,0.484938170456436,0.355009592516614,1.30977727695932,0.847802961552438,0,0.545492241181669,0,2.19552671033272,1.85541675650079,0.69716365721711,0.621966330092223,1.26160425437814,0.36497735907583,1.56449532329816,0.643240938192885,4.14404764057442,0,0,1.41968160047813,3.87744787179634,1.68707720918437,1.7647035637183,2.61455332910887,0.949082476444386,1.61797569792197,2.15843611637881,1.53898862778556,0,1.40241773803446,1.2347220339942,4.41026134156626,0,0,0,0,2.21379189377604,0.514703430895577,0.439001141634502,2.24803506515239,0.502644862058154,0.555530670951178,0.651616610620649,0,0,0.34779121492523,1.29149563659404,0,0.462985512576611,0,24.4963363367375,25.7545848628462,0,0,0,0,0,0.708875486211932,0.179117045405697,0.581267877027924,1.53353071666084,0,0,0,0,0.12624243342638,0.063497894292169,0,1.17217447210047,0,0.411309970813294,0,0,1.56983518083505,1.74384027533312,0.66004457238855,0,10.7296933755565,0,0.531876233169741,1.04007436911366,3.34369586540785,2.83698264046557,1.3321108950805,0.428933980974443,1.6278648161743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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100616376 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=41563 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-24bp_to_NR_039713_5end | |||
|description=CAGE_peak_1_at_MIR4492_5end | |||
|id=chr11:118781361..118781392,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.80e-22!254;CL:0000548!4.45e-18!679;CL:0000004!4.45e-18!679;CL:0000255!4.45e-18!679;CL:0000012!2.79e-17!682;CL:0002321!3.40e-15!248;CL:0000220!1.75e-14!246;CL:0000055!1.69e-13!180;CL:0000003!1.97e-13!722;CL:0000144!8.92e-08!625;CL:0000076!1.61e-07!62;CL:0000222!5.34e-07!119;CL:0000057!5.61e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.72e-14,253;CL:0002321,5.81e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.17e-10!106;DOID:0050687!9.39e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.88e-08,106;DOID:0050687,1.11e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002100!1.69e-13!216;UBERON:0003104!2.45e-12!238;UBERON:0009142!2.45e-12!238;UBERON:0005256!8.96e-10!143;UBERON:0000475!3.73e-08!365;UBERON:0000481!5.76e-08!347;UBERON:0000490!9.42e-08!138;UBERON:0004119!1.18e-07!169;UBERON:0000925!1.18e-07!169;UBERON:0006595!1.18e-07!169;UBERON:0003914!1.22e-07!118;UBERON:0000077!2.80e-07!130;UBERON:0000119!5.33e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.97e-07;9!UBERON:0001557;2.97e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.82e-08,9;UBERON:0002100,1.52e-07,199;UBERON:0004119,4.50e-07,160;UBERON:0000925,4.50e-07,160;UBERON:0006595,4.50e-07,160;UBERON:0001048,5.89e-07,160 | |||
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| |||
|short_description=p1@MIR4492 | |||
}} |
Revision as of 16:05, 10 September 2013
Short description: | p1@MIR4492 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MIR4492_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_NR_039713_5end |
EntrezGene: | MIR4492 |
HGNC: | 41563 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.72e-14 | 253 |
embryonic cell | 5.81e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.82e-08 | 9 |
trunk | 1.52e-07 | 199 |
endoderm-derived structure | 4.50e-07 | 160 |
endoderm | 4.50e-07 | 160 |
presumptive endoderm | 4.50e-07 | 160 |
primordium | 5.89e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.88e-08 | 106 |
cell type cancer | 1.11e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.