FFCP PHASE1:Hg19::chr11:118661169..118661182,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1612|description=CAGE_peak_at_chr11:118661169..118661182,+|id=chr11:118661169..118661182,+|ontology_enrichment_celltype=CL:0000738!1.06e-21!140;CL:0000988!2.85e-20!182;CL:0000838!4.81e-20!52;CL:0000542!1.40e-19!53;CL:0000051!1.40e-19!53;CL:0002031!7.18e-19!124;CL:0000037!3.33e-16!172;CL:0000566!3.33e-16!172;CL:0002032!5.65e-16!165;CL:0000837!5.65e-16!165;CL:0002087!3.41e-15!119;CL:0000623!3.25e-13!3;CL:0000825!3.25e-13!3;CL:0000080!6.24e-11!6;CL:0002393!2.64e-10!9;CL:0002397!2.64e-10!9;CL:0000084!7.76e-09!25;CL:0000827!7.76e-09!25;CL:0000081!1.48e-08!11;CL:0002274!9.97e-08!5;CL:0000457!9.97e-08!5;CL:0002191!9.97e-08!5;CL:0000097!9.97e-08!5;CL:0000831!9.97e-08!5;CL:0002028!9.97e-08!5;CL:0000791!1.89e-07!18;CL:0000789!1.89e-07!18;CL:0002420!1.89e-07!18;CL:0002419!1.89e-07!18;CL:0000790!1.89e-07!18;CL:0000945!7.07e-07!24;CL:0000826!7.07e-07!24;CL:0000236!9.65e-07!14|ontology_enrichment_celltype_v019=CL:0000623;7.82e-33;3!CL:0000542;8.92e-12;53!CL:0000791;1.15e-09;18!CL:0000789;1.15e-09;18!CL:0002419;1.15e-09;18!CL:0000625;2.44e-09;11!CL:0000097;3.30e-09;5!CL:0000236;1.02e-07;13!CL:0000084;5.29e-07;25|ontology_enrichment_celltype_v019_2=CL:0000623,7.42e-33,3;CL:0000825,7.42e-33,3;CL:0000838,6.35e-19,52;CL:0000542,1.53e-18,53;CL:0000051,1.53e-18,53;CL:0000988,9.69e-15,177;CL:0002031,1.01e-12,120;CL:0000738,5.23e-11,136;CL:0000791,1.14e-09,18;CL:0000789,1.14e-09,18;CL:0002420,1.14e-09,18;CL:0002419,1.14e-09,18;CL:0000790,1.14e-09,18;CL:0002087,2.18e-09,115;CL:0000625,2.59e-09,11;CL:0000097,3.17e-09,5;CL:0002028,3.17e-09,5;CL:0002032,5.28e-09,161;CL:0000837,5.28e-09,161;CL:0000037,1.51e-08,168;CL:0000236,3.19e-07,14;CL:0000084,5.25e-07,25;CL:0000827,5.25e-07,25|ontology_enrichment_development_v019=CL:0000051;8.92e-12;53!CL:0000790;1.15e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002331!9.76e-07!10;UBERON:0000358!9.76e-07!10;UBERON:0000307!9.76e-07!10;UBERON:0000091!9.76e-07!10;UBERON:0000087!9.76e-07!10;UBERON:0007806!9.76e-07!10;UBERON:0008780!9.76e-07!10;UBERON:0005728!9.76e-07!10|ontology_enrichment_uberon_v019=UBERON:0002331;2.70e-17;10!UBERON:0000478;2.54e-07;24!UBERON:0000178;5.14e-07;15!UBERON:0000179;5.14e-07;15!UBERON:0000463;5.14e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.59e-17,10;UBERON:0000358,2.59e-17,10;UBERON:0000307,2.59e-17,10;UBERON:0000091,2.59e-17,10;UBERON:0000087,2.59e-17,10;UBERON:0007010,2.59e-17,10;UBERON:0007806,2.59e-17,10;UBERON:0008780,2.59e-17,10;UBERON:0005728,2.59e-17,10;UBERON:0000478,2.50e-07,24;UBERON:0000178,4.98e-07,15;UBERON:0000179,4.98e-07,15;UBERON:0000463,4.98e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.425208599930087,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0.661044872784862,0,1.70763890732835,1.17447437874188,1.14681968437569,1.32171328579026,1.12101712596307,0,1.37696839079683,0.786021525498329,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44338206706778,5.34880391567015,2.02754165435919,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86595303986695,0.864719720501769,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,7.48716888767323,5.60631694634745,3.85029108839245,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.8199859596543,4.57186574102061,5.8476291723055,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.137539436597234,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1612 | |||
|description=CAGE_peak_at_chr11:118661169..118661182,+ | |||
|id=chr11:118661169..118661182,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.06e-21!140;CL:0000988!2.85e-20!182;CL:0000838!4.81e-20!52;CL:0000542!1.40e-19!53;CL:0000051!1.40e-19!53;CL:0002031!7.18e-19!124;CL:0000037!3.33e-16!172;CL:0000566!3.33e-16!172;CL:0002032!5.65e-16!165;CL:0000837!5.65e-16!165;CL:0002087!3.41e-15!119;CL:0000623!3.25e-13!3;CL:0000825!3.25e-13!3;CL:0000080!6.24e-11!6;CL:0002393!2.64e-10!9;CL:0002397!2.64e-10!9;CL:0000084!7.76e-09!25;CL:0000827!7.76e-09!25;CL:0000081!1.48e-08!11;CL:0002274!9.97e-08!5;CL:0000457!9.97e-08!5;CL:0002191!9.97e-08!5;CL:0000097!9.97e-08!5;CL:0000831!9.97e-08!5;CL:0002028!9.97e-08!5;CL:0000791!1.89e-07!18;CL:0000789!1.89e-07!18;CL:0002420!1.89e-07!18;CL:0002419!1.89e-07!18;CL:0000790!1.89e-07!18;CL:0000945!7.07e-07!24;CL:0000826!7.07e-07!24;CL:0000236!9.65e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000623;7.82e-33;3!CL:0000542;8.92e-12;53!CL:0000791;1.15e-09;18!CL:0000789;1.15e-09;18!CL:0002419;1.15e-09;18!CL:0000625;2.44e-09;11!CL:0000097;3.30e-09;5!CL:0000236;1.02e-07;13!CL:0000084;5.29e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.42e-33,3;CL:0000825,7.42e-33,3;CL:0000838,6.35e-19,52;CL:0000542,1.53e-18,53;CL:0000051,1.53e-18,53;CL:0000988,9.69e-15,177;CL:0002031,1.01e-12,120;CL:0000738,5.23e-11,136;CL:0000791,1.14e-09,18;CL:0000789,1.14e-09,18;CL:0002420,1.14e-09,18;CL:0002419,1.14e-09,18;CL:0000790,1.14e-09,18;CL:0002087,2.18e-09,115;CL:0000625,2.59e-09,11;CL:0000097,3.17e-09,5;CL:0002028,3.17e-09,5;CL:0002032,5.28e-09,161;CL:0000837,5.28e-09,161;CL:0000037,1.51e-08,168;CL:0000236,3.19e-07,14;CL:0000084,5.25e-07,25;CL:0000827,5.25e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;8.92e-12;53!CL:0000790;1.15e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!9.76e-07!10;UBERON:0000358!9.76e-07!10;UBERON:0000307!9.76e-07!10;UBERON:0000091!9.76e-07!10;UBERON:0000087!9.76e-07!10;UBERON:0007806!9.76e-07!10;UBERON:0008780!9.76e-07!10;UBERON:0005728!9.76e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.70e-17;10!UBERON:0000478;2.54e-07;24!UBERON:0000178;5.14e-07;15!UBERON:0000179;5.14e-07;15!UBERON:0000463;5.14e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.59e-17,10;UBERON:0000358,2.59e-17,10;UBERON:0000307,2.59e-17,10;UBERON:0000091,2.59e-17,10;UBERON:0000087,2.59e-17,10;UBERON:0007010,2.59e-17,10;UBERON:0007806,2.59e-17,10;UBERON:0008780,2.59e-17,10;UBERON:0005728,2.59e-17,10;UBERON:0000478,2.50e-07,24;UBERON:0000178,4.98e-07,15;UBERON:0000179,4.98e-07,15;UBERON:0000463,4.98e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.425208599930087,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0.661044872784862,0,1.70763890732835,1.17447437874188,1.14681968437569,1.32171328579026,1.12101712596307,0,1.37696839079683,0.786021525498329,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44338206706778,5.34880391567015,2.02754165435919,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86595303986695,0.864719720501769,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,7.48716888767323,5.60631694634745,3.85029108839245,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.8199859596543,4.57186574102061,5.8476291723055,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.137539436597234,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:118661169..118661182,+ | |||
}} |
Revision as of 16:04, 10 September 2013
Short description: | p@chr11:118661169..118661182, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:118661169..118661182, + |
Coexpression cluster: | C1612_cord_CD19_Natural_CD8_CD4_CD34_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.42e-33 | 3 |
pro-NK cell | 7.42e-33 | 3 |
lymphoid lineage restricted progenitor cell | 6.35e-19 | 52 |
lymphocyte | 1.53e-18 | 53 |
common lymphoid progenitor | 1.53e-18 | 53 |
hematopoietic cell | 9.69e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 1.01e-12 | 120 |
leukocyte | 5.23e-11 | 136 |
mature alpha-beta T cell | 1.14e-09 | 18 |
alpha-beta T cell | 1.14e-09 | 18 |
immature T cell | 1.14e-09 | 18 |
mature T cell | 1.14e-09 | 18 |
immature alpha-beta T cell | 1.14e-09 | 18 |
nongranular leukocyte | 2.18e-09 | 115 |
CD8-positive, alpha-beta T cell | 2.59e-09 | 11 |
mast cell | 3.17e-09 | 5 |
basophil mast progenitor cell | 3.17e-09 | 5 |
hematopoietic oligopotent progenitor cell | 5.28e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.28e-09 | 161 |
hematopoietic stem cell | 1.51e-08 | 168 |
B cell | 3.19e-07 | 14 |
T cell | 5.25e-07 | 25 |
pro-T cell | 5.25e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.59e-17 | 10 |
blastocyst | 2.59e-17 | 10 |
blastula | 2.59e-17 | 10 |
bilaminar disc | 2.59e-17 | 10 |
inner cell mass | 2.59e-17 | 10 |
cleaving embryo | 2.59e-17 | 10 |
connecting stalk | 2.59e-17 | 10 |
inner cell mass derived epiblast | 2.59e-17 | 10 |
extraembryonic mesoderm | 2.59e-17 | 10 |
extraembryonic structure | 2.50e-07 | 24 |
blood | 4.98e-07 | 15 |
haemolymphatic fluid | 4.98e-07 | 15 |
organism substance | 4.98e-07 | 15 |
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