FFCP PHASE1:Hg19::chr10:92980351..92980360,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84333|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28264|TSSclassifier=S|UniProt=Q86SE9|association_with_transcript=-8bp_to_NM_032373,uc001khi.2_5end|coexpression_cluster_id=C1|description=CAGE_peak_9_at_PCGF5_5end|id=chr10:92980351..92980360,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000784;9.52e-20;3!CL:0002591;1.92e-15;1|ontology_enrichment_celltype_v019_2=CL:0000784,9.53e-20,3;CL:0002591,2.06e-15,1|ontology_enrichment_development_v019=UBERON:0009117;9.22e-07;10!UBERON:0005564;9.22e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.13e-11!115;UBERON:0001049!3.68e-09!57;UBERON:0005068!3.68e-09!57;UBERON:0006241!3.68e-09!57;UBERON:0007135!3.68e-09!57;UBERON:0002616!3.88e-09!59;UBERON:0003080!4.37e-09!42;UBERON:0002346!1.21e-08!90;UBERON:0003075!1.21e-08!86;UBERON:0007284!1.21e-08!86;UBERON:0000955!1.65e-08!69;UBERON:0006238!1.65e-08!69;UBERON:0002780!1.85e-08!41;UBERON:0001890!1.85e-08!41;UBERON:0006240!1.85e-08!41;UBERON:0001017!3.09e-08!82;UBERON:0005743!7.38e-08!86;UBERON:0001893!6.28e-07!34;UBERON:0000073!7.53e-07!94;UBERON:0001016!7.53e-07!94;UBERON:0001869!8.50e-07!32;UBERON:0000153!9.32e-07!129;UBERON:0007811!9.32e-07!129|ontology_enrichment_uberon_v019=UBERON:0000078;2.23e-08;2!UBERON:0002012;2.23e-08;2!UBERON:0008886;2.23e-08;2!UBERON:0000473;3.04e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.31e-08,2;UBERON:0007497,2.31e-08,2;UBERON:0003643,2.31e-08,2;UBERON:0003504,2.31e-08,2;UBERON:0003469,2.31e-08,2;UBERON:0003496,2.31e-08,2;UBERON:0002012,2.31e-08,2;UBERON:0008886,2.31e-08,2;UBERON:0007303,2.31e-08,2;UBERON:0002061,2.31e-08,2;UBERON:0005432,2.31e-08,2;UBERON:0004363,2.31e-08,2;UBERON:0000473,3.04e-08,8|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.410502947249729,0.157421562627358,0,0,0.154816123316076,0,0.30120591877825,0,0.154934401160603,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0,0,0,0,0,0,0,0.175669571386252,2.5540919722054,0,0,0,0.174129737299267,0.26591592103773,0.238490624305342,1.14398982156026,1.11437250398869,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0.44905874525234,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,1.06748995729705,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0.515281080091258,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0.502548796003046,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.424216295861138,1.13008116620243,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,2.27858874869665,0.714695326373367,0.822724546172388,0,1.08006287447623,0.79312517629427,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0.556812347790485,0,0,0,0,0,0,0.4854420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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28264 | |||
|TSSclassifier=S | |||
|UniProt=Q86SE9 | |||
|association_with_transcript=-8bp_to_NM_032373,uc001khi.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_9_at_PCGF5_5end | |||
|id=chr10:92980351..92980360,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;9.52e-20;3!CL:0002591;1.92e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,9.53e-20,3;CL:0002591,2.06e-15,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.22e-07;10!UBERON:0005564;9.22e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-11!115;UBERON:0001049!3.68e-09!57;UBERON:0005068!3.68e-09!57;UBERON:0006241!3.68e-09!57;UBERON:0007135!3.68e-09!57;UBERON:0002616!3.88e-09!59;UBERON:0003080!4.37e-09!42;UBERON:0002346!1.21e-08!90;UBERON:0003075!1.21e-08!86;UBERON:0007284!1.21e-08!86;UBERON:0000955!1.65e-08!69;UBERON:0006238!1.65e-08!69;UBERON:0002780!1.85e-08!41;UBERON:0001890!1.85e-08!41;UBERON:0006240!1.85e-08!41;UBERON:0001017!3.09e-08!82;UBERON:0005743!7.38e-08!86;UBERON:0001893!6.28e-07!34;UBERON:0000073!7.53e-07!94;UBERON:0001016!7.53e-07!94;UBERON:0001869!8.50e-07!32;UBERON:0000153!9.32e-07!129;UBERON:0007811!9.32e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.23e-08;2!UBERON:0002012;2.23e-08;2!UBERON:0008886;2.23e-08;2!UBERON:0000473;3.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.31e-08,2;UBERON:0007497,2.31e-08,2;UBERON:0003643,2.31e-08,2;UBERON:0003504,2.31e-08,2;UBERON:0003469,2.31e-08,2;UBERON:0003496,2.31e-08,2;UBERON:0002012,2.31e-08,2;UBERON:0008886,2.31e-08,2;UBERON:0007303,2.31e-08,2;UBERON:0002061,2.31e-08,2;UBERON:0005432,2.31e-08,2;UBERON:0004363,2.31e-08,2;UBERON:0000473,3.04e-08,8 | |||
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| |||
|short_description=p9@PCGF5 | |||
}} |
Revision as of 14:58, 10 September 2013
Short description: | p9@PCGF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PCGF5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -8bp_to_NM_032373, uc001khi.2_5end |
EntrezGene: | PCGF5 |
HGNC: | 28264 |
UniProt: | Q86SE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 9.53e-20 | 3 |
smooth muscle cell of the pulmonary artery | 2.06e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 2.31e-08 | 2 |
developing epithelial placode | 2.31e-08 | 2 |
respiratory system arterial blood vessel | 2.31e-08 | 2 |
respiratory system blood vessel | 2.31e-08 | 2 |
respiratory system artery | 2.31e-08 | 2 |
head blood vessel | 2.31e-08 | 2 |
pulmonary artery | 2.31e-08 | 2 |
pulmonary vascular system | 2.31e-08 | 2 |
pharyngeal vasculature | 2.31e-08 | 2 |
truncus arteriosus | 2.31e-08 | 2 |
aortic sac | 2.31e-08 | 2 |
pharyngeal arch artery | 2.31e-08 | 2 |
testis | 3.04e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.