FFCP PHASE1:Hg19::chr10:91738412..91738433,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=31459|TSSclassifier=S|UniProt=|association_with_transcript=-40bp_to_ENST00000489253_5end|coexpression_cluster_id=C248|description=CAGE_peak_2_at_SNRPD2P1_5end|id=chr10:91738412..91738433,+|ontology_enrichment_celltype=CL:0002057!6.30e-18!42;CL:0000860!1.44e-16!45;CL:0000037!1.10e-15!172;CL:0000566!1.10e-15!172;CL:0000738!1.93e-15!140;CL:0002032!4.16e-15!165;CL:0000837!4.16e-15!165;CL:0002031!4.21e-15!124;CL:0000557!4.80e-14!71;CL:0000839!9.12e-14!70;CL:0000988!3.10e-13!182;CL:0000763!3.34e-13!112;CL:0000049!3.34e-13!112;CL:0002009!1.62e-12!65;CL:0002087!4.60e-12!119;CL:0000766!8.91e-12!76;CL:0002194!1.52e-11!63;CL:0000576!1.52e-11!63;CL:0000040!1.52e-11!63;CL:0000559!1.52e-11!63|ontology_enrichment_celltype_v019=CL:0000860;1.43e-17;33!CL:0002057;1.43e-17;33!CL:0000473;1.42e-14;39!CL:0000234;1.42e-14;39!CL:0000576;1.71e-11;48!CL:0000766;1.65e-09;69|ontology_enrichment_celltype_v019_2=CL:0000473,2.83e-22,48;CL:0000234,2.83e-22,48;CL:0000860,6.52e-22,42;CL:0002057,6.52e-22,42;CL:0000557,5.05e-19,67;CL:0000839,1.22e-18,66;CL:0002031,2.85e-18,120;CL:0000037,8.37e-18,168;CL:0000738,9.53e-18,136;CL:0002032,3.16e-17,161;CL:0000837,3.16e-17,161;CL:0000763,6.27e-17,108;CL:0000049,6.27e-17,108;CL:0002009,8.83e-17,61;CL:0000988,8.55e-16,177;CL:0000766,1.41e-15,72;CL:0002194,2.00e-15,59;CL:0000576,2.00e-15,59;CL:0000040,2.00e-15,59;CL:0000559,2.00e-15,59;CL:0002087,2.68e-13,115;CL:0000034,8.78e-07,441|ontology_enrichment_development_v019=CL:0002057;6.86e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.39e-13!80;UBERON:0001474!1.91e-11!86;UBERON:0004765!6.96e-11!101;UBERON:0001434!6.96e-11!101;UBERON:0001737!1.58e-09!9;UBERON:0002390!2.22e-09!102;UBERON:0003061!2.22e-09!102;UBERON:0002405!1.00e-08!115;UBERON:0002193!2.64e-08!112;UBERON:0002204!1.15e-07!167|ontology_enrichment_uberon_v019=UBERON:0001737;1.88e-12;9!UBERON:0001557;1.88e-12;9|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.58e-17,76;UBERON:0004765,1.73e-15,90;UBERON:0001474,4.65e-15,82;UBERON:0002405,2.19e-14,93;UBERON:0001434,1.51e-12,100;UBERON:0001737,2.03e-12,9;UBERON:0002390,2.82e-11,98;UBERON:0003061,2.82e-11,98;UBERON:0002193,1.60e-10,108;UBERON:0002204,1.83e-07,167|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0.263766978228454,0.123766352960047,0,16.1358035148426,18.6835303687433,19.7183724404591,15.1259167625057,0,0.204000691244253,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,1.57345710739562,0.767658796194425,2.32224184974114,0,0,0,0.0774672005803016,0,4.69760702935756,0,0,0,0,0,0,0.872389432677388,2.64513160582167,2.18325655069035,2.09186133215116,1.6446715520873,4.02618282163635,2.58923153089935,3.07392847834921,4.49316236788312,1.72372840368309,0.645484683583826,2.70852973188684,1.69418105588344,3.82068610080984,5.61808711112712,3.36692281607993,4.49300637906531,3.83602275479425,2.30895910130701,2.19410023383795,5.96714650745772,3.77272010217159,3.97169657283798,3.11411124497787,2.76373531782418,7.82224377630302,6.08128765174327,3.02699751316684,2.20966581592539,6.0127853613768,7.81644559354185,5.52771179909113,9.85395633889367,2.80821577866238,3.90459921387916,2.4108838004562,5.98526761856622,6.56425034756997,8.21988691940853,0,6.55366333514558,2.66852776159066,5.54749289336459,4.40435585739614,2.29900975981793,3.30522436392431,2.86216126360609,0,0,0,9.25199300053181,7.28661131875997,10.271979306228,0,0,0,9.69681673265933,6.19252306603822,5.6813736688168,7.79306913631645,7.35309015442146,13.8464776513173,15.0643048316862,8.12411591295047,6.53265730600943,5.33243324995501,7.72858151637278,8.0141505157896,8.69409257205158,6.96946846861684,8.29376567078111,11.4989076185474,9.63129412929313,6.89796888483458,6.52892146416997,11.8919255249166,3.50421955756506,3.25541726928209,2.85135613334512,3.76437797694432,3.32765189001488,1.24930726552346,2.8413270245282,6.56902397536837,0,0,0,0,0,10.2290049474824,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.324547393654683,0,0,0,5.71994910780128,5.20040501861391,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,2.25095607382472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0,2.02531598689519,0,0,0,8.72888706821584,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,11.6067591402789,16.4239811584123,0,0,0,0,0,10.2926916034664,11.1265895451547,14.4606617930089,10.8088093277746,12.4191283132672,12.338072193777,12.4044803507351,13.1468381633982,13.4661504931237,0,0,0,0,0,0,0,0,0.122988438543114,11.1519076694042,0,1.1240175325762,0.100528972411631,0,0,0,0,7.76733713333015,6.22266079449855,0,8.7967247389556,7.80042024161853,0,0,0,0.234004265139238,0,7.49870671894216,9.57498130733499,14.0357346269963,0,0,0,0,4.0502279646084,3.31724984865235,3.02651902175619,2.5248486685276,5.14332943766569,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31459 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENST00000489253_5end | |||
|coexpression_cluster_id=C248 | |||
|description=CAGE_peak_2_at_SNRPD2P1_5end | |||
|id=chr10:91738412..91738433,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.30e-18!42;CL:0000860!1.44e-16!45;CL:0000037!1.10e-15!172;CL:0000566!1.10e-15!172;CL:0000738!1.93e-15!140;CL:0002032!4.16e-15!165;CL:0000837!4.16e-15!165;CL:0002031!4.21e-15!124;CL:0000557!4.80e-14!71;CL:0000839!9.12e-14!70;CL:0000988!3.10e-13!182;CL:0000763!3.34e-13!112;CL:0000049!3.34e-13!112;CL:0002009!1.62e-12!65;CL:0002087!4.60e-12!119;CL:0000766!8.91e-12!76;CL:0002194!1.52e-11!63;CL:0000576!1.52e-11!63;CL:0000040!1.52e-11!63;CL:0000559!1.52e-11!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-17;33!CL:0002057;1.43e-17;33!CL:0000473;1.42e-14;39!CL:0000234;1.42e-14;39!CL:0000576;1.71e-11;48!CL:0000766;1.65e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.83e-22,48;CL:0000234,2.83e-22,48;CL:0000860,6.52e-22,42;CL:0002057,6.52e-22,42;CL:0000557,5.05e-19,67;CL:0000839,1.22e-18,66;CL:0002031,2.85e-18,120;CL:0000037,8.37e-18,168;CL:0000738,9.53e-18,136;CL:0002032,3.16e-17,161;CL:0000837,3.16e-17,161;CL:0000763,6.27e-17,108;CL:0000049,6.27e-17,108;CL:0002009,8.83e-17,61;CL:0000988,8.55e-16,177;CL:0000766,1.41e-15,72;CL:0002194,2.00e-15,59;CL:0000576,2.00e-15,59;CL:0000040,2.00e-15,59;CL:0000559,2.00e-15,59;CL:0002087,2.68e-13,115;CL:0000034,8.78e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.86e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.39e-13!80;UBERON:0001474!1.91e-11!86;UBERON:0004765!6.96e-11!101;UBERON:0001434!6.96e-11!101;UBERON:0001737!1.58e-09!9;UBERON:0002390!2.22e-09!102;UBERON:0003061!2.22e-09!102;UBERON:0002405!1.00e-08!115;UBERON:0002193!2.64e-08!112;UBERON:0002204!1.15e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.88e-12;9!UBERON:0001557;1.88e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.58e-17,76;UBERON:0004765,1.73e-15,90;UBERON:0001474,4.65e-15,82;UBERON:0002405,2.19e-14,93;UBERON:0001434,1.51e-12,100;UBERON:0001737,2.03e-12,9;UBERON:0002390,2.82e-11,98;UBERON:0003061,2.82e-11,98;UBERON:0002193,1.60e-10,108;UBERON:0002204,1.83e-07,167 | |||
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| |||
|short_description=p2@SNRPD2P1 | |||
}} |
Revision as of 14:57, 10 September 2013
Short description: | p2@SNRPD2P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SNRPD2P1_5end |
Coexpression cluster: | C248_iPS_Aortic_Hep2_amygdala_acute_medial_Myoblast |
Association with transcript: | -40bp_to_ENST00000489253_5end |
EntrezGene: | NA |
HGNC: | 31459 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.83e-22 | 48 |
phagocyte | 2.83e-22 | 48 |
classical monocyte | 6.52e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.52e-22 | 42 |
granulocyte monocyte progenitor cell | 5.05e-19 | 67 |
myeloid lineage restricted progenitor cell | 1.22e-18 | 66 |
hematopoietic lineage restricted progenitor cell | 2.85e-18 | 120 |
hematopoietic stem cell | 8.37e-18 | 168 |
leukocyte | 9.53e-18 | 136 |
hematopoietic oligopotent progenitor cell | 3.16e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.16e-17 | 161 |
myeloid cell | 6.27e-17 | 108 |
common myeloid progenitor | 6.27e-17 | 108 |
macrophage dendritic cell progenitor | 8.83e-17 | 61 |
hematopoietic cell | 8.55e-16 | 177 |
myeloid leukocyte | 1.41e-15 | 72 |
monopoietic cell | 2.00e-15 | 59 |
monocyte | 2.00e-15 | 59 |
monoblast | 2.00e-15 | 59 |
promonocyte | 2.00e-15 | 59 |
nongranular leukocyte | 2.68e-13 | 115 |
stem cell | 8.78e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.58e-17 | 76 |
skeletal element | 1.73e-15 | 90 |
bone element | 4.65e-15 | 82 |
immune system | 2.19e-14 | 93 |
skeletal system | 1.51e-12 | 100 |
larynx | 2.03e-12 | 9 |
hematopoietic system | 2.82e-11 | 98 |
blood island | 2.82e-11 | 98 |
hemolymphoid system | 1.60e-10 | 108 |
musculoskeletal system | 1.83e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.