FFCP PHASE1:Hg19::chr10:6779446..6779460,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=102bp_to_ENST00000417112_5end|coexpression_cluster_id=C133|description=CAGE_peak_2_at_ENST00000417112_5end|id=chr10:6779446..6779460,+|ontology_enrichment_celltype=CL:0000066!2.69e-29!254;CL:0002076!1.20e-09!43;CL:0000076!6.29e-08!62;CL:0002368!9.92e-08!13;CL:1000507!3.19e-07!12;CL:1000494!3.19e-07!12;CL:1000449!4.56e-07!16;CL:1000497!6.94e-07!18;CL:0002518!6.94e-07!18|ontology_enrichment_celltype_v019=CL:0002076;5.66e-07;42|ontology_enrichment_celltype_v019_2=CL:0000066,2.18e-32,253;CL:0000076,3.09e-09,63;CL:0002076,8.11e-09,42;CL:0000223,6.80e-07,58|ontology_enrichment_development_v019=UBERON:0008947;5.96e-09;29|ontology_enrichment_disease=DOID:305!7.34e-14!106;DOID:1749!4.20e-12!14;DOID:0050687!2.37e-09!143|ontology_enrichment_disease_v019=DOID:1749;2.40e-16;14|ontology_enrichment_disease_v019_2=DOID:305,1.54e-20,106;DOID:1749,2.57e-16,14;DOID:0050687,5.59e-15,143;DOID:162,1.69e-10,235;DOID:14566,5.25e-10,239|ontology_enrichment_uberon=UBERON:0004119!9.92e-20!169;UBERON:0000925!9.92e-20!169;UBERON:0006595!9.92e-20!169;UBERON:0001004!7.52e-16!72;UBERON:0001007!4.91e-15!155;UBERON:0001555!4.91e-15!155;UBERON:0007026!4.91e-15!155;UBERON:0000065!1.22e-13!53;UBERON:0008947!1.07e-12!38;UBERON:0003258!1.07e-12!38;UBERON:0000072!5.64e-12!46;UBERON:0000077!2.53e-11!130;UBERON:0001041!3.03e-11!98;UBERON:0000064!1.47e-10!219;UBERON:0004921!2.00e-10!129;UBERON:0004185!2.00e-10!129;UBERON:0001737!3.44e-10!9;UBERON:0000466!9.18e-10!126;UBERON:0000481!1.09e-09!347;UBERON:0005177!3.74e-09!107;UBERON:0000464!9.51e-09!104;UBERON:0003104!3.06e-08!238;UBERON:0009142!3.06e-08!238;UBERON:0005911!6.87e-08!82;UBERON:0000062!8.13e-08!511;UBERON:0001048!8.43e-08!168;UBERON:0006555!1.28e-07!17;UBERON:0005103!1.28e-07!17;UBERON:0000083!1.28e-07!17;UBERON:0009201!1.28e-07!17;UBERON:0004819!1.28e-07!17;UBERON:0006553!1.28e-07!17;UBERON:0003074!1.28e-07!17;UBERON:0003060!1.28e-07!17;UBERON:0001557!2.85e-07!19;UBERON:0009773!3.19e-07!12;UBERON:0001231!3.19e-07!12;UBERON:0004810!3.19e-07!12;UBERON:0004211!4.56e-07!16;UBERON:0001285!4.56e-07!16;UBERON:0007684!4.56e-07!16;UBERON:0003220!4.56e-07!16;UBERON:0004208!4.56e-07!16;UBERON:0000080!5.38e-07!18;UBERON:0002120!5.38e-07!18;UBERON:0004875!5.38e-07!18;UBERON:0005721!5.38e-07!18;UBERON:0005754!5.38e-07!18;UBERON:0007297!5.38e-07!18;UBERON:0004876!5.92e-07!20;UBERON:0007196!7.63e-07!14;UBERON:0001558!7.63e-07!14|ontology_enrichment_uberon_v019=UBERON:0001737;5.17e-17;9!UBERON:0001557;5.17e-17;9!UBERON:0000072;4.43e-14;37!UBERON:0000065;8.09e-12;44!UBERON:0001004;2.55e-09;65!UBERON:0005910;4.56e-08;6!UBERON:0002294;2.53e-07;7!UBERON:0001173;2.53e-07;7!UBERON:0000486;4.68e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.02e-17,9;UBERON:0004119,7.81e-17,160;UBERON:0000925,7.81e-17,160;UBERON:0006595,7.81e-17,160;UBERON:0008947,1.77e-15,38;UBERON:0003258,1.77e-15,38;UBERON:0001004,3.01e-15,74;UBERON:0000072,3.29e-14,47;UBERON:0000065,4.21e-14,54;UBERON:0001007,2.94e-13,145;UBERON:0001555,2.94e-13,145;UBERON:0007026,2.94e-13,145;UBERON:0001557,1.77e-10,19;UBERON:0001041,6.92e-10,87;UBERON:0004921,7.20e-09,118;UBERON:0005911,1.47e-08,82;UBERON:0005910,4.78e-08,6;UBERON:0001048,2.37e-07,160;UBERON:0005177,9.90e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,2.79120467188971,2.40285509343189,0,0,0,0,0,0,0,0,0,0,0,2.05311637609326,0.125542639594803,0,0,0,0,0,0,1.83884244895785,1.8072355126695,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.351339142772504,0,6.55731518926576,8.52804218404188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,1.15956511897978,0.818238361772504,2.58124135850103,0,0,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,2.36613600079688,2.36018566109342,4.09718750801919,2.64705534557745,1.74303555273925,3.08451804844426,2.02246962240247,2.35465758150415,2.69323009862473,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0,0,0,0,0,0.658501712451753,0,8.84654957222351,1.66659201285353,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,1.87467667973554,0.16798212819886,1.70130116690864,2.32852159027406,11.9159914790724,6.9008882249738,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0.799266537048298,0.57191197463259,0,0.823240336780769,0,0.355391948742546,1.58390374586686,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.434418072340414,0.195801157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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=102bp_to_ENST00000417112_5end | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_2_at_ENST00000417112_5end | |||
|id=chr10:6779446..6779460,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.69e-29!254;CL:0002076!1.20e-09!43;CL:0000076!6.29e-08!62;CL:0002368!9.92e-08!13;CL:1000507!3.19e-07!12;CL:1000494!3.19e-07!12;CL:1000449!4.56e-07!16;CL:1000497!6.94e-07!18;CL:0002518!6.94e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.66e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.18e-32,253;CL:0000076,3.09e-09,63;CL:0002076,8.11e-09,42;CL:0000223,6.80e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.96e-09;29 | |||
|ontology_enrichment_disease=DOID:305!7.34e-14!106;DOID:1749!4.20e-12!14;DOID:0050687!2.37e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.40e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.54e-20,106;DOID:1749,2.57e-16,14;DOID:0050687,5.59e-15,143;DOID:162,1.69e-10,235;DOID:14566,5.25e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.92e-20!169;UBERON:0000925!9.92e-20!169;UBERON:0006595!9.92e-20!169;UBERON:0001004!7.52e-16!72;UBERON:0001007!4.91e-15!155;UBERON:0001555!4.91e-15!155;UBERON:0007026!4.91e-15!155;UBERON:0000065!1.22e-13!53;UBERON:0008947!1.07e-12!38;UBERON:0003258!1.07e-12!38;UBERON:0000072!5.64e-12!46;UBERON:0000077!2.53e-11!130;UBERON:0001041!3.03e-11!98;UBERON:0000064!1.47e-10!219;UBERON:0004921!2.00e-10!129;UBERON:0004185!2.00e-10!129;UBERON:0001737!3.44e-10!9;UBERON:0000466!9.18e-10!126;UBERON:0000481!1.09e-09!347;UBERON:0005177!3.74e-09!107;UBERON:0000464!9.51e-09!104;UBERON:0003104!3.06e-08!238;UBERON:0009142!3.06e-08!238;UBERON:0005911!6.87e-08!82;UBERON:0000062!8.13e-08!511;UBERON:0001048!8.43e-08!168;UBERON:0006555!1.28e-07!17;UBERON:0005103!1.28e-07!17;UBERON:0000083!1.28e-07!17;UBERON:0009201!1.28e-07!17;UBERON:0004819!1.28e-07!17;UBERON:0006553!1.28e-07!17;UBERON:0003074!1.28e-07!17;UBERON:0003060!1.28e-07!17;UBERON:0001557!2.85e-07!19;UBERON:0009773!3.19e-07!12;UBERON:0001231!3.19e-07!12;UBERON:0004810!3.19e-07!12;UBERON:0004211!4.56e-07!16;UBERON:0001285!4.56e-07!16;UBERON:0007684!4.56e-07!16;UBERON:0003220!4.56e-07!16;UBERON:0004208!4.56e-07!16;UBERON:0000080!5.38e-07!18;UBERON:0002120!5.38e-07!18;UBERON:0004875!5.38e-07!18;UBERON:0005721!5.38e-07!18;UBERON:0005754!5.38e-07!18;UBERON:0007297!5.38e-07!18;UBERON:0004876!5.92e-07!20;UBERON:0007196!7.63e-07!14;UBERON:0001558!7.63e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.17e-17;9!UBERON:0001557;5.17e-17;9!UBERON:0000072;4.43e-14;37!UBERON:0000065;8.09e-12;44!UBERON:0001004;2.55e-09;65!UBERON:0005910;4.56e-08;6!UBERON:0002294;2.53e-07;7!UBERON:0001173;2.53e-07;7!UBERON:0000486;4.68e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.02e-17,9;UBERON:0004119,7.81e-17,160;UBERON:0000925,7.81e-17,160;UBERON:0006595,7.81e-17,160;UBERON:0008947,1.77e-15,38;UBERON:0003258,1.77e-15,38;UBERON:0001004,3.01e-15,74;UBERON:0000072,3.29e-14,47;UBERON:0000065,4.21e-14,54;UBERON:0001007,2.94e-13,145;UBERON:0001555,2.94e-13,145;UBERON:0007026,2.94e-13,145;UBERON:0001557,1.77e-10,19;UBERON:0001041,6.92e-10,87;UBERON:0004921,7.20e-09,118;UBERON:0005911,1.47e-08,82;UBERON:0005910,4.78e-08,6;UBERON:0001048,2.37e-07,160;UBERON:0005177,9.90e-07,101 | |||
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| |||
|short_description=p2@ENST00000417112 | |||
}} |
Revision as of 14:01, 10 September 2013
Short description: | p2@ENST00000417112 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000417112_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 102bp_to_ENST00000417112_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.18e-32 | 253 |
squamous epithelial cell | 3.09e-09 | 63 |
endo-epithelial cell | 8.11e-09 | 42 |
endodermal cell | 6.80e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.02e-17 | 9 |
endoderm-derived structure | 7.81e-17 | 160 |
endoderm | 7.81e-17 | 160 |
presumptive endoderm | 7.81e-17 | 160 |
respiratory primordium | 1.77e-15 | 38 |
endoderm of foregut | 1.77e-15 | 38 |
respiratory system | 3.01e-15 | 74 |
segment of respiratory tract | 3.29e-14 | 47 |
respiratory tract | 4.21e-14 | 54 |
digestive system | 2.94e-13 | 145 |
digestive tract | 2.94e-13 | 145 |
primitive gut | 2.94e-13 | 145 |
upper respiratory tract | 1.77e-10 | 19 |
foregut | 6.92e-10 | 87 |
subdivision of digestive tract | 7.20e-09 | 118 |
endo-epithelium | 1.47e-08 | 82 |
transitional epithelium | 4.78e-08 | 6 |
primordium | 2.37e-07 | 160 |
trunk region element | 9.90e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.54e-20 | 106 |
squamous cell carcinoma | 2.57e-16 | 14 |
cell type cancer | 5.59e-15 | 143 |
cancer | 1.69e-10 | 235 |
disease of cellular proliferation | 5.25e-10 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.