FFCP PHASE1:Hg19::chr10:23728041..23728084,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=220213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27346|TSSclassifier=S|UniProt=Q5VV17|association_with_transcript=-113bp_to_ENST00000376495,NM_001145373,uc001irr.1_5end|coexpression_cluster_id=C1308|description=CAGE_peak_3_at_OTUD1_5end|id=chr10:23728041..23728084,+|ontology_enrichment_celltype=CL:0000766!1.07e-29!76;CL:0000738!1.67e-29!140;CL:0002057!7.19e-26!42;CL:0000557!7.73e-26!71;CL:0002009!3.18e-25!65;CL:0000860!1.16e-24!45;CL:0002194!1.78e-24!63;CL:0000576!1.78e-24!63;CL:0000040!1.78e-24!63;CL:0000559!1.78e-24!63;CL:0002031!2.08e-24!124;CL:0000839!2.71e-24!70;CL:0002087!2.97e-24!119;CL:0000037!1.91e-14!172;CL:0000566!1.91e-14!172;CL:0002032!1.26e-13!165;CL:0000837!1.26e-13!165;CL:0000988!8.83e-12!182;CL:0000763!2.36e-11!112;CL:0000049!2.36e-11!112;CL:0002393!7.62e-07!9;CL:0002397!7.62e-07!9|ontology_enrichment_celltype_v019=CL:0000860;2.46e-19;33!CL:0002057;2.46e-19;33!CL:0000473;3.83e-17;39!CL:0000234;3.83e-17;39!CL:0000576;4.57e-16;48!CL:0000766;6.73e-14;69!CL:0002087;5.97e-08;104!CL:0000738;1.97e-07;136|ontology_enrichment_celltype_v019_2=CL:0000766,2.62e-31,72;CL:0000738,3.35e-31,136;CL:0000557,2.80e-27,67;CL:0000473,3.09e-27,48;CL:0000234,3.09e-27,48;CL:0002009,1.04e-26,61;CL:0000860,1.93e-26,42;CL:0002057,1.93e-26,42;CL:0002194,6.05e-26,59;CL:0000576,6.05e-26,59;CL:0000040,6.05e-26,59;CL:0000559,6.05e-26,59;CL:0002031,6.65e-26,120;CL:0002087,9.48e-26,115;CL:0000839,1.21e-25,66;CL:0000037,2.38e-16,168;CL:0002032,1.85e-15,161;CL:0000837,1.85e-15,161;CL:0000988,1.10e-13,177;CL:0000763,7.60e-13,108;CL:0000049,7.60e-13,108;CL:0002393,5.72e-07,9;CL:0002397,5.72e-07,9|ontology_enrichment_development_v019=CL:0002057;1.98e-19;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.95e-23!102;UBERON:0003061!5.95e-23!102;UBERON:0002193!1.45e-21!112;UBERON:0002371!5.96e-20!80;UBERON:0001474!3.29e-18!86;UBERON:0002405!5.01e-15!115;UBERON:0004765!8.98e-14!101;UBERON:0001434!8.98e-14!101;UBERON:0007023!1.89e-12!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.14e-24,98;UBERON:0003061,2.14e-24,98;UBERON:0002193,5.22e-23,108;UBERON:0002371,2.21e-21,76;UBERON:0002405,4.48e-20,93;UBERON:0001474,2.86e-19,82;UBERON:0004765,2.37e-16,90;UBERON:0001434,4.44e-14,100;UBERON:0007023,2.86e-12,114|phase1_expression=1.99846217197612,2.5692062866918,2.53717927372748,3.00219895059391,3.12872766099101,0.872338524100369,2.53299878168311,1.89515962028049,3.13422753839806,2.21160542851358,2.09340350391728,1.96597234917155,1.58260186937072,2.10402800032079,1.98838425436749,0.672325146451775,1.80808358407193,2.19093027116212,0.975865597581014,0.369363174230364,0.816002764977012,1.56727360739044,0.572471974262113,0.547497700291537,0.627713197974014,0,0,0.157421562627358,38.9430634080415,18.8076405067634,61.4620009564822,3.67768489791571,1.204823675113,0,1.00707360754392,0.568676929949686,1.17440175733939,55.3995408531877,63.5725898480349,53.8186959375313,11.867520134716,8.42123531649347,16.7424118962221,18.4655763250047,18.1380452970629,11.6440349370152,27.6590553917765,17.2690512969167,24.7765096716083,28.769239232215,22.5421421745609,18.9185783910868,36.5430421580816,32.2742341791913,23.0225027210381,21.0831420287717,14.191119803008,13.7081325511502,30.6083892370903,21.8231738411744,30.0488449125549,15.8328624089624,15.7576289521089,15.7703157697097,26.6992499538297,18.7237124148076,26.1585344578141,17.587406567972,17.2089363078666,19.1126183340503,31.4807741369352,11.4166067156145,20.2535927962166,14.9991253281479,21.0478256965393,12.5795187305026,21.79175444242,22.3763570333844,11.5722422421898,20.5209175493699,24.6656679726872,16.0744455312878,10.5597746676794,6.55366333514558,9.7846017924991,15.3622880123943,11.2110876370083,6.8970292794538,11.8988077101275,12.4026988089597,15.3687501659551,18.2043528704991,21.4073007750128,3.96513985737078,5.04457706683382,1.84368859342554,32.0636925285548,32.6198933081807,29.6066158559293,3.8452893939856,19.2294137313818,12.7830907548378,5.84480185223734,7.01885878376594,17.3817485410154,21.4887877746113,13.5401931882508,7.68547918354051,7.93362020115257,10.1951500854279,11.8830507647915,10.1431080007268,10.8249191108304,10.9691739516782,11.4989076185474,4.30575502250752,13.4127172760672,17.8686271650968,5.56643322442906,6.68987370080603,2.60433381542567,2.85135613334512,5.42070428679982,2.8157054453972,4.99722906209383,4.49876778883632,4.92676798152628,17.5397866605517,16.848732334361,22.5926070057166,0,1.34140171940727,1.53435074212236,4.3372698286148,2.50668955317945,2.17269778441236,0,1.45990461090791,0.378139268656271,0.443458794925128,1.14185221401064,4.97720486891308,8.74308691902101,4.07862887062872,5.51730569212962,9.22887607686116,7.31268782853758,6.43924685624423,2.85997455390064,3.71457501329565,0.79504962946682,0.860234595106124,0.347140501607594,1.13061588384802,1.25849830862972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14576,2.19303106742873,4.96211178389294,49.595690909413,3.32182311862948,2.14280734351315,2.35398605553177,3.64179362541979,2.95960848756687,4.7899279887825,1.49804183822513,3.08678416987353,1.97112225632812,3.81482086664525,0.827356886187777,0.778619813244484,5.88698196378855,2.67096502857203,8.12789273609988,1.82631744101899,2.37520350340484,6.6885236304187,5.28926426907257,0.790068058663633,0.23248285073625,0,0.801711364730253,7.04534958154325,11.7795749194825,9.67763526539729,4.30227358820278,0.236664001461131,0.937347452350735,2.54032230114557,3.89481676524885,0.62041277132864,0.955538938977433,11.0736877479814,2.0611549059201,0,0,2.05325613712494,1.1598144313382,3.39997695141398,0.935757853848423,2.18845852677505,0.713520544665411,0.79062257427272,0.989464650708862,6.18947658623362,5.47936522566407,3.71551252856727,1.88126918544609,1.71603825227734,5.4205605833374,2.35570160537934,3.86160320425212,1.6906229103336,2.0391253762538,9.68034355192492,9.99097263590446,0.0999411559249289,4.46384846514144,0.352894871715692,0.240724100067505,2.92134555298607,2.75237570042724,3.15347082933193,0.315543124386369,4.07948941145488,1.30905207102113,3.7031878836078,2.60396512716726,4.15958065768276,1.73050624849516,0.630832124175395,0.655593431782173,1.14028650910293,3.26364255174342,0.534434810531121,3.6757959813938,1.25353769646188,3.48582011803901,1.60778478093707,0.829169439458779,4.3441858261996,3.19850972851471,3.09483760902862,4.2628680491764,4.96597714366863,3.81248332774086,6.36471582781649,2.62752345645685,2.61260097476354,3.76456631193809,5.99433271829829,4.51849893973861,2.99394320891412,2.93051766999508,6.29691340678521,1.9307228228694,1.61685363791856,2.34640942403454,2.81155321620593,2.44137706989443,5.99181096766961,5.43439242695771,0|short_description=p3@OTUD1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=220213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27346 | |||
|TSSclassifier=S | |||
|UniProt=Q5VV17 | |||
|association_with_transcript=-113bp_to_ENST00000376495,NM_001145373,uc001irr.1_5end | |||
|coexpression_cluster_id=C1308 | |||
|description=CAGE_peak_3_at_OTUD1_5end | |||
|id=chr10:23728041..23728084,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.07e-29!76;CL:0000738!1.67e-29!140;CL:0002057!7.19e-26!42;CL:0000557!7.73e-26!71;CL:0002009!3.18e-25!65;CL:0000860!1.16e-24!45;CL:0002194!1.78e-24!63;CL:0000576!1.78e-24!63;CL:0000040!1.78e-24!63;CL:0000559!1.78e-24!63;CL:0002031!2.08e-24!124;CL:0000839!2.71e-24!70;CL:0002087!2.97e-24!119;CL:0000037!1.91e-14!172;CL:0000566!1.91e-14!172;CL:0002032!1.26e-13!165;CL:0000837!1.26e-13!165;CL:0000988!8.83e-12!182;CL:0000763!2.36e-11!112;CL:0000049!2.36e-11!112;CL:0002393!7.62e-07!9;CL:0002397!7.62e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.46e-19;33!CL:0002057;2.46e-19;33!CL:0000473;3.83e-17;39!CL:0000234;3.83e-17;39!CL:0000576;4.57e-16;48!CL:0000766;6.73e-14;69!CL:0002087;5.97e-08;104!CL:0000738;1.97e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.62e-31,72;CL:0000738,3.35e-31,136;CL:0000557,2.80e-27,67;CL:0000473,3.09e-27,48;CL:0000234,3.09e-27,48;CL:0002009,1.04e-26,61;CL:0000860,1.93e-26,42;CL:0002057,1.93e-26,42;CL:0002194,6.05e-26,59;CL:0000576,6.05e-26,59;CL:0000040,6.05e-26,59;CL:0000559,6.05e-26,59;CL:0002031,6.65e-26,120;CL:0002087,9.48e-26,115;CL:0000839,1.21e-25,66;CL:0000037,2.38e-16,168;CL:0002032,1.85e-15,161;CL:0000837,1.85e-15,161;CL:0000988,1.10e-13,177;CL:0000763,7.60e-13,108;CL:0000049,7.60e-13,108;CL:0002393,5.72e-07,9;CL:0002397,5.72e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.95e-23!102;UBERON:0003061!5.95e-23!102;UBERON:0002193!1.45e-21!112;UBERON:0002371!5.96e-20!80;UBERON:0001474!3.29e-18!86;UBERON:0002405!5.01e-15!115;UBERON:0004765!8.98e-14!101;UBERON:0001434!8.98e-14!101;UBERON:0007023!1.89e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.14e-24,98;UBERON:0003061,2.14e-24,98;UBERON:0002193,5.22e-23,108;UBERON:0002371,2.21e-21,76;UBERON:0002405,4.48e-20,93;UBERON:0001474,2.86e-19,82;UBERON:0004765,2.37e-16,90;UBERON:0001434,4.44e-14,100;UBERON:0007023,2.86e-12,114 | |||
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| |||
|short_description=p3@OTUD1 | |||
}} |
Revision as of 12:53, 10 September 2013
Short description: | p3@OTUD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_OTUD1_5end |
Coexpression cluster: | C1308_CD14_CD4_Basophils_Peripheral_Neutrophils_Eosinophils_CD8 |
Association with transcript: | -113bp_to_ENST00000376495, NM_001145373, uc001irr.1_5end |
EntrezGene: | OTUD1 |
HGNC: | 27346 |
UniProt: | Q5VV17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.62e-31 | 72 |
leukocyte | 3.35e-31 | 136 |
granulocyte monocyte progenitor cell | 2.80e-27 | 67 |
defensive cell | 3.09e-27 | 48 |
phagocyte | 3.09e-27 | 48 |
macrophage dendritic cell progenitor | 1.04e-26 | 61 |
classical monocyte | 1.93e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.93e-26 | 42 |
monopoietic cell | 6.05e-26 | 59 |
monocyte | 6.05e-26 | 59 |
monoblast | 6.05e-26 | 59 |
promonocyte | 6.05e-26 | 59 |
hematopoietic lineage restricted progenitor cell | 6.65e-26 | 120 |
nongranular leukocyte | 9.48e-26 | 115 |
myeloid lineage restricted progenitor cell | 1.21e-25 | 66 |
hematopoietic stem cell | 2.38e-16 | 168 |
hematopoietic oligopotent progenitor cell | 1.85e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-15 | 161 |
hematopoietic cell | 1.10e-13 | 177 |
myeloid cell | 7.60e-13 | 108 |
common myeloid progenitor | 7.60e-13 | 108 |
intermediate monocyte | 5.72e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.72e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.14e-24 | 98 |
blood island | 2.14e-24 | 98 |
hemolymphoid system | 5.22e-23 | 108 |
bone marrow | 2.21e-21 | 76 |
immune system | 4.48e-20 | 93 |
bone element | 2.86e-19 | 82 |
skeletal element | 2.37e-16 | 90 |
skeletal system | 4.44e-14 | 100 |
adult organism | 2.86e-12 | 114 |
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