FFCP PHASE1:Hg19::chr10:23727989..23728040,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=220213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27346|TSSclassifier=S|UniProt=Q5VV17|association_with_transcript=-157bp_to_ENST00000376495,NM_001145373,uc001irr.1_5end|coexpression_cluster_id=C1308|description=CAGE_peak_2_at_OTUD1_5end|id=chr10:23727989..23728040,+|ontology_enrichment_celltype=CL:0000738!5.26e-30!140;CL:0000766!9.02e-25!76;CL:0002031!9.91e-25!124;CL:0002087!2.04e-24!119;CL:0002057!8.80e-24!42;CL:0000860!6.57e-22!45;CL:0000557!2.74e-21!71;CL:0002009!3.21e-20!65;CL:0000839!7.96e-20!70;CL:0002194!1.83e-19!63;CL:0000576!1.83e-19!63;CL:0000040!1.83e-19!63;CL:0000559!1.83e-19!63;CL:0000037!8.56e-15!172;CL:0000566!8.56e-15!172;CL:0002032!3.36e-13!165;CL:0000837!3.36e-13!165;CL:0000988!8.48e-13!182;CL:0000791!5.24e-09!18;CL:0000789!5.24e-09!18;CL:0002420!5.24e-09!18;CL:0002419!5.24e-09!18;CL:0000790!5.24e-09!18;CL:0000763!2.31e-08!112;CL:0000049!2.31e-08!112|ontology_enrichment_celltype_v019=CL:0000860;1.99e-17;33!CL:0002057;1.99e-17;33!CL:0000576;9.18e-15;48!CL:0000473;1.00e-14;39!CL:0000234;1.00e-14;39!CL:0000766;1.11e-12;69!CL:0000791;1.95e-09;18!CL:0000789;1.95e-09;18!CL:0002419;1.95e-09;18!CL:0002087;1.23e-08;104!CL:0000738;5.74e-07;136|ontology_enrichment_celltype_v019_2=CL:0000738,2.94e-31,136;CL:0000766,9.76e-27,72;CL:0002031,5.34e-26,120;CL:0002087,2.04e-25,115;CL:0000473,4.59e-24,48;CL:0000234,4.59e-24,48;CL:0000860,4.67e-24,42;CL:0002057,4.67e-24,42;CL:0000557,4.29e-23,67;CL:0002009,6.71e-22,61;CL:0000839,1.56e-21,66;CL:0002194,3.97e-21,59;CL:0000576,3.97e-21,59;CL:0000040,3.97e-21,59;CL:0000559,3.97e-21,59;CL:0000037,7.61e-16,168;CL:0000988,2.93e-14,177;CL:0002032,3.61e-14,161;CL:0000837,3.61e-14,161;CL:0000763,2.38e-09,108;CL:0000049,2.38e-09,108;CL:0000791,4.24e-09,18;CL:0000789,4.24e-09,18;CL:0002420,4.24e-09,18;CL:0002419,4.24e-09,18;CL:0000790,4.24e-09,18|ontology_enrichment_development_v019=CL:0002057;9.27e-18;42!CL:0000790;1.95e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.29e-19!102;UBERON:0003061!1.29e-19!102;UBERON:0002193!2.43e-17!112;UBERON:0002371!4.47e-16!80;UBERON:0001474!1.25e-14!86;UBERON:0007023!6.00e-14!115;UBERON:0002405!1.31e-10!115;UBERON:0004765!1.06e-09!101;UBERON:0001434!1.06e-09!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.27e-21,98;UBERON:0003061,3.27e-21,98;UBERON:0002193,2.11e-18,108;UBERON:0002371,1.50e-17,76;UBERON:0001474,8.47e-16,82;UBERON:0002405,3.71e-15,93;UBERON:0007023,4.36e-14,114;UBERON:0004765,2.71e-12,90;UBERON:0001434,9.66e-10,100|phase1_expression=1.63510541343501,1.49870366723688,1.40954404095971,0,0,0,2.53299878168311,0.631719873426831,2.08948502559871,2.7030733015166,4.88460817580699,1.52908960491121,2.63766978228454,0.990130823680373,0.662794751455832,1.34465029290355,0,1.46062018077475,0.975865597581014,0.984968464614303,1.63200552995402,1.25381888591235,1.43117993565528,0.410623275218653,1.12988375635323,0.305653622991805,0.328402357799783,0.157421562627358,23.2084923340853,14.9693465257913,49.5411594611443,0,1.204823675113,2.58827807116751,1.23947520928483,0.995184627411951,5.5784083473621,50.4135821764008,68.5862010347885,57.073858998269,11.867520134716,7.77344798445551,5.92423805558629,12.5042485350426,11.7141542543531,12.8569552429543,23.4753327274741,22.6142338412004,20.4406204790768,25.3169305243492,20.7490172288572,12.7700404139836,41.3694816883942,40.0200503821972,25.7310324529249,15.8123565215788,11.7349644524874,10.1125568000288,27.5475503133812,16.3673803808808,23.6554736545645,10.5552416059749,11.369428484433,9.37694451171927,24.3775760448011,15.3194010666608,16.1933784738849,24.8736178604176,23.9882142473293,14.7688414399479,19.3727840842678,11.7848843516021,13.9243450473989,14.365359469212,18.2839697969937,17.820984868212,19.6575104506366,19.9735267479203,14.1438516293431,15.6757009057687,16.9079175619227,17.3530946076402,7.03984977845291,6.55366333514558,8.00558328477199,10.6682555641627,8.40831572775626,10.3455439191807,14.542987201267,7.63243003628291,19.9224539188307,28.1873850898051,25.9945795125156,9.25199300053181,11.2101712596307,3.16060901730092,39.5386637928804,48.3403238181473,34.7466533309171,9.69681673265933,24.1182477308857,22.2520468695325,19.4826728407911,8.24437380950284,31.2282261923327,24.3687284041983,14.6234086433108,9.22257502024861,10.7949258474699,9.37296056240954,8.84320056914715,8.98389565778663,25.9501485533606,23.276052043805,21.9524599990451,3.51258962362455,22.2267886289114,26.1156858566799,15.4342012131897,12.4240511586398,9.11516835398986,12.3558765778289,10.3896832163663,8.31912972503719,8.74515085866421,7.81364931745256,8.21127996921047,28.2249440514625,30.7556225151033,39.1025890483557,4.87613732627923,0.670700859703636,1.40648818027883,2.1686349143074,3.00802746381534,2.60723734129483,0.795285947051099,2.43317435151318,1.32348744029695,1.10864698731282,1.31752178539689,8.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=220213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27346 | |||
|TSSclassifier=S | |||
|UniProt=Q5VV17 | |||
|association_with_transcript=-157bp_to_ENST00000376495,NM_001145373,uc001irr.1_5end | |||
|coexpression_cluster_id=C1308 | |||
|description=CAGE_peak_2_at_OTUD1_5end | |||
|id=chr10:23727989..23728040,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.26e-30!140;CL:0000766!9.02e-25!76;CL:0002031!9.91e-25!124;CL:0002087!2.04e-24!119;CL:0002057!8.80e-24!42;CL:0000860!6.57e-22!45;CL:0000557!2.74e-21!71;CL:0002009!3.21e-20!65;CL:0000839!7.96e-20!70;CL:0002194!1.83e-19!63;CL:0000576!1.83e-19!63;CL:0000040!1.83e-19!63;CL:0000559!1.83e-19!63;CL:0000037!8.56e-15!172;CL:0000566!8.56e-15!172;CL:0002032!3.36e-13!165;CL:0000837!3.36e-13!165;CL:0000988!8.48e-13!182;CL:0000791!5.24e-09!18;CL:0000789!5.24e-09!18;CL:0002420!5.24e-09!18;CL:0002419!5.24e-09!18;CL:0000790!5.24e-09!18;CL:0000763!2.31e-08!112;CL:0000049!2.31e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.99e-17;33!CL:0002057;1.99e-17;33!CL:0000576;9.18e-15;48!CL:0000473;1.00e-14;39!CL:0000234;1.00e-14;39!CL:0000766;1.11e-12;69!CL:0000791;1.95e-09;18!CL:0000789;1.95e-09;18!CL:0002419;1.95e-09;18!CL:0002087;1.23e-08;104!CL:0000738;5.74e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.94e-31,136;CL:0000766,9.76e-27,72;CL:0002031,5.34e-26,120;CL:0002087,2.04e-25,115;CL:0000473,4.59e-24,48;CL:0000234,4.59e-24,48;CL:0000860,4.67e-24,42;CL:0002057,4.67e-24,42;CL:0000557,4.29e-23,67;CL:0002009,6.71e-22,61;CL:0000839,1.56e-21,66;CL:0002194,3.97e-21,59;CL:0000576,3.97e-21,59;CL:0000040,3.97e-21,59;CL:0000559,3.97e-21,59;CL:0000037,7.61e-16,168;CL:0000988,2.93e-14,177;CL:0002032,3.61e-14,161;CL:0000837,3.61e-14,161;CL:0000763,2.38e-09,108;CL:0000049,2.38e-09,108;CL:0000791,4.24e-09,18;CL:0000789,4.24e-09,18;CL:0002420,4.24e-09,18;CL:0002419,4.24e-09,18;CL:0000790,4.24e-09,18 | |||
|ontology_enrichment_development_v019=CL:0002057;9.27e-18;42!CL:0000790;1.95e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-19!102;UBERON:0003061!1.29e-19!102;UBERON:0002193!2.43e-17!112;UBERON:0002371!4.47e-16!80;UBERON:0001474!1.25e-14!86;UBERON:0007023!6.00e-14!115;UBERON:0002405!1.31e-10!115;UBERON:0004765!1.06e-09!101;UBERON:0001434!1.06e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.27e-21,98;UBERON:0003061,3.27e-21,98;UBERON:0002193,2.11e-18,108;UBERON:0002371,1.50e-17,76;UBERON:0001474,8.47e-16,82;UBERON:0002405,3.71e-15,93;UBERON:0007023,4.36e-14,114;UBERON:0004765,2.71e-12,90;UBERON:0001434,9.66e-10,100 | |||
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| |||
|short_description=p2@OTUD1 | |||
}} |
Revision as of 12:53, 10 September 2013
Short description: | p2@OTUD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_OTUD1_5end |
Coexpression cluster: | C1308_CD14_CD4_Basophils_Peripheral_Neutrophils_Eosinophils_CD8 |
Association with transcript: | -157bp_to_ENST00000376495, NM_001145373, uc001irr.1_5end |
EntrezGene: | OTUD1 |
HGNC: | 27346 |
UniProt: | Q5VV17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.94e-31 | 136 |
myeloid leukocyte | 9.76e-27 | 72 |
hematopoietic lineage restricted progenitor cell | 5.34e-26 | 120 |
nongranular leukocyte | 2.04e-25 | 115 |
defensive cell | 4.59e-24 | 48 |
phagocyte | 4.59e-24 | 48 |
classical monocyte | 4.67e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.67e-24 | 42 |
granulocyte monocyte progenitor cell | 4.29e-23 | 67 |
macrophage dendritic cell progenitor | 6.71e-22 | 61 |
myeloid lineage restricted progenitor cell | 1.56e-21 | 66 |
monopoietic cell | 3.97e-21 | 59 |
monocyte | 3.97e-21 | 59 |
monoblast | 3.97e-21 | 59 |
promonocyte | 3.97e-21 | 59 |
hematopoietic stem cell | 7.61e-16 | 168 |
hematopoietic cell | 2.93e-14 | 177 |
hematopoietic oligopotent progenitor cell | 3.61e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.61e-14 | 161 |
myeloid cell | 2.38e-09 | 108 |
common myeloid progenitor | 2.38e-09 | 108 |
mature alpha-beta T cell | 4.24e-09 | 18 |
alpha-beta T cell | 4.24e-09 | 18 |
immature T cell | 4.24e-09 | 18 |
mature T cell | 4.24e-09 | 18 |
immature alpha-beta T cell | 4.24e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.27e-21 | 98 |
blood island | 3.27e-21 | 98 |
hemolymphoid system | 2.11e-18 | 108 |
bone marrow | 1.50e-17 | 76 |
bone element | 8.47e-16 | 82 |
immune system | 3.71e-15 | 93 |
adult organism | 4.36e-14 | 114 |
skeletal element | 2.71e-12 | 90 |
skeletal system | 9.66e-10 | 100 |
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