FFCP PHASE1:Hg19::chr10:17272192..17272205,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7431|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12692|TSSclassifier=W|UniProt=B0YJC5|association_with_transcript=189bp_to_ENST00000469543_5end|coexpression_cluster_id=C22|description=CAGE_peak_11_at_VIM_5end|id=chr10:17272192..17272205,+|ontology_enrichment_celltype=CL:0000738!2.27e-39!140;CL:0002031!2.78e-34!124;CL:0002087!2.71e-32!119;CL:0002057!2.44e-31!42;CL:0000860!3.88e-28!45;CL:0000037!1.45e-26!172;CL:0000566!1.45e-26!172;CL:0000766!5.99e-25!76;CL:0000988!7.60e-25!182;CL:0002032!4.72e-24!165;CL:0000837!4.72e-24!165;CL:0000557!1.54e-22!71;CL:0000839!2.39e-21!70;CL:0002009!3.64e-21!65;CL:0002194!1.68e-19!63;CL:0000576!1.68e-19!63;CL:0000040!1.68e-19!63;CL:0000559!1.68e-19!63;CL:0000048!6.40e-18!430;CL:0002320!7.81e-18!365;CL:0000134!1.60e-17!358;CL:0000034!2.49e-17!444;CL:0000723!5.20e-17!436;CL:0000219!4.76e-14!390;CL:0000763!2.62e-13!112;CL:0000049!2.62e-13!112;CL:0000791!1.27e-12!18;CL:0000789!1.27e-12!18;CL:0002420!1.27e-12!18;CL:0002419!1.27e-12!18;CL:0000790!1.27e-12!18;CL:0000084!1.57e-11!25;CL:0000827!1.57e-11!25;CL:0000838!3.43e-11!52;CL:0000542!8.83e-11!53;CL:0000051!8.83e-11!53;CL:0002371!2.98e-09!591;CL:0002393!5.88e-09!9;CL:0002397!5.88e-09!9;CL:0000003!2.20e-08!722;CL:0000144!3.60e-08!625;CL:0000624!2.84e-07!6;CL:0000625!5.68e-07!11|ontology_enrichment_celltype_v019=CL:0000860;1.90e-20;33!CL:0002057;1.90e-20;33!CL:0000766;2.71e-17;69!CL:0000576;7.58e-17;48!CL:0002393;1.45e-16;6!CL:0002397;1.45e-16;6!CL:0000473;3.14e-15;39!CL:0000234;3.14e-15;39!CL:0000791;1.06e-14;18!CL:0000789;1.06e-14;18!CL:0002419;1.06e-14;18!CL:0002087;4.19e-13;104!CL:0000624;3.32e-12;6!CL:0000738;3.42e-12;136!CL:0000623;3.51e-10;3!CL:0000084;5.85e-10;25!CL:0000226;1.38e-08;3!CL:0000784;1.38e-08;3!CL:0000842;1.38e-08;3!CL:0000542;1.57e-07;53!CL:0000988;2.01e-07;177!CL:0001014;5.19e-07;2!CL:0001016;5.19e-07;2!CL:0000763;5.69e-07;100|ontology_enrichment_celltype_v019_2=CL:0000738,7.64e-54,136;CL:0002031,4.34e-42,120;CL:0002087,5.62e-42,115;CL:0000037,5.79e-41,168;CL:0000988,3.54e-38,177;CL:0002032,7.98e-35,161;CL:0000837,7.98e-35,161;CL:0000860,2.74e-34,42;CL:0002057,2.74e-34,42;CL:0000766,1.35e-32,72;CL:0000473,7.15e-32,48;CL:0000234,7.15e-32,48;CL:0000557,8.57e-31,67;CL:0002009,9.15e-30,61;CL:0000839,9.75e-27,66;CL:0002194,3.51e-26,59;CL:0000576,3.51e-26,59;CL:0000040,3.51e-26,59;CL:0000559,3.51e-26,59;CL:0000763,5.66e-22,108;CL:0000049,5.66e-22,108;CL:0000791,7.15e-15,18;CL:0000789,7.15e-15,18;CL:0002420,7.15e-15,18;CL:0002419,7.15e-15,18;CL:0000790,7.15e-15,18;CL:0002393,1.83e-14,9;CL:0002397,1.83e-14,9;CL:0000134,5.21e-13,354;CL:0002320,1.72e-12,361;CL:0000624,2.29e-12,6;CL:0000838,4.15e-12,52;CL:0000542,8.50e-12,53;CL:0000051,8.50e-12,53;CL:0000048,6.34e-11,427;CL:0000219,1.13e-10,386;CL:0000723,1.42e-10,433;CL:0000623,2.93e-10,3;CL:0000825,2.93e-10,3;CL:0000034,4.02e-10,441;CL:0000084,4.46e-10,25;CL:0000827,4.46e-10,25;CL:0000226,1.32e-08,3;CL:0000842,1.32e-08,3;CL:0000784,3.17e-08,3;CL:0001014,5.08e-07,2;CL:0001016,5.08e-07,2;CL:0000625,9.27e-07,11|ontology_enrichment_development_v019=CL:0002057;4.36e-25;42!CL:0000790;1.06e-14;18!CL:0000051;1.57e-07;53!CL:0000049;9.82e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.78e-19!102;UBERON:0003061!4.78e-19!102;UBERON:0002371!7.21e-19!80;UBERON:0001474!6.77e-18!86;UBERON:0002384!9.70e-17!375;UBERON:0002193!3.27e-16!112;UBERON:0004765!3.63e-16!101;UBERON:0001434!3.63e-16!101;UBERON:0002204!1.13e-12!167;UBERON:0002405!2.57e-11!115;UBERON:0003081!6.62e-10!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.40e-26,76;UBERON:0002390,6.90e-25,98;UBERON:0003061,6.90e-25,98;UBERON:0001474,1.09e-23,82;UBERON:0002193,9.61e-22,108;UBERON:0002405,1.19e-21,93;UBERON:0004765,7.16e-21,90;UBERON:0001434,5.47e-18,100;UBERON:0002384,8.72e-12,371;UBERON:0002204,5.50e-10,167;UBERON:0003081,1.29e-09,203|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,3.14691421479123,2.68680578668049,0.619264493264304,0,0,0,0,0,0,1.10799081706375,2.20598892217156,2.17010870715852,0,0,0,1.16318591023652,1.51150377475524,0.485168122375632,1.16214518452842,0.822335776043652,0.309706370895104,0.575384784644301,1.5369642391746,1.41889337933151,3.10271112662957,0.645484683583826,0,1.12945403725563,0.545812300115692,1.12361742222542,1.53041946185451,1.92557416245656,1.91801137739712,0.329851300186716,0.199463657621632,1.70489900213078,1.16083695451434,0.56738522469114,0,1.25624332628372,0.521482918420201,2.17188844705117,0.605399502633369,2.57794345191295,2.53169909952708,1.69004229049553,2.12604299965044,1.46761051855863,1.46027220490444,0.750884464207532,0.64290234678832,1.71007646244749,0.39783335439818,0.182664153764634,0,0.546138611262131,0.889509253863555,0,0.800791974072025,0,1.32208974556972,1.90810750907073,0,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7431 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12692 | |||
|TSSclassifier=W | |||
|UniProt=B0YJC5 | |||
|association_with_transcript=189bp_to_ENST00000469543_5end | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_11_at_VIM_5end | |||
|id=chr10:17272192..17272205,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.27e-39!140;CL:0002031!2.78e-34!124;CL:0002087!2.71e-32!119;CL:0002057!2.44e-31!42;CL:0000860!3.88e-28!45;CL:0000037!1.45e-26!172;CL:0000566!1.45e-26!172;CL:0000766!5.99e-25!76;CL:0000988!7.60e-25!182;CL:0002032!4.72e-24!165;CL:0000837!4.72e-24!165;CL:0000557!1.54e-22!71;CL:0000839!2.39e-21!70;CL:0002009!3.64e-21!65;CL:0002194!1.68e-19!63;CL:0000576!1.68e-19!63;CL:0000040!1.68e-19!63;CL:0000559!1.68e-19!63;CL:0000048!6.40e-18!430;CL:0002320!7.81e-18!365;CL:0000134!1.60e-17!358;CL:0000034!2.49e-17!444;CL:0000723!5.20e-17!436;CL:0000219!4.76e-14!390;CL:0000763!2.62e-13!112;CL:0000049!2.62e-13!112;CL:0000791!1.27e-12!18;CL:0000789!1.27e-12!18;CL:0002420!1.27e-12!18;CL:0002419!1.27e-12!18;CL:0000790!1.27e-12!18;CL:0000084!1.57e-11!25;CL:0000827!1.57e-11!25;CL:0000838!3.43e-11!52;CL:0000542!8.83e-11!53;CL:0000051!8.83e-11!53;CL:0002371!2.98e-09!591;CL:0002393!5.88e-09!9;CL:0002397!5.88e-09!9;CL:0000003!2.20e-08!722;CL:0000144!3.60e-08!625;CL:0000624!2.84e-07!6;CL:0000625!5.68e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.90e-20;33!CL:0002057;1.90e-20;33!CL:0000766;2.71e-17;69!CL:0000576;7.58e-17;48!CL:0002393;1.45e-16;6!CL:0002397;1.45e-16;6!CL:0000473;3.14e-15;39!CL:0000234;3.14e-15;39!CL:0000791;1.06e-14;18!CL:0000789;1.06e-14;18!CL:0002419;1.06e-14;18!CL:0002087;4.19e-13;104!CL:0000624;3.32e-12;6!CL:0000738;3.42e-12;136!CL:0000623;3.51e-10;3!CL:0000084;5.85e-10;25!CL:0000226;1.38e-08;3!CL:0000784;1.38e-08;3!CL:0000842;1.38e-08;3!CL:0000542;1.57e-07;53!CL:0000988;2.01e-07;177!CL:0001014;5.19e-07;2!CL:0001016;5.19e-07;2!CL:0000763;5.69e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.64e-54,136;CL:0002031,4.34e-42,120;CL:0002087,5.62e-42,115;CL:0000037,5.79e-41,168;CL:0000988,3.54e-38,177;CL:0002032,7.98e-35,161;CL:0000837,7.98e-35,161;CL:0000860,2.74e-34,42;CL:0002057,2.74e-34,42;CL:0000766,1.35e-32,72;CL:0000473,7.15e-32,48;CL:0000234,7.15e-32,48;CL:0000557,8.57e-31,67;CL:0002009,9.15e-30,61;CL:0000839,9.75e-27,66;CL:0002194,3.51e-26,59;CL:0000576,3.51e-26,59;CL:0000040,3.51e-26,59;CL:0000559,3.51e-26,59;CL:0000763,5.66e-22,108;CL:0000049,5.66e-22,108;CL:0000791,7.15e-15,18;CL:0000789,7.15e-15,18;CL:0002420,7.15e-15,18;CL:0002419,7.15e-15,18;CL:0000790,7.15e-15,18;CL:0002393,1.83e-14,9;CL:0002397,1.83e-14,9;CL:0000134,5.21e-13,354;CL:0002320,1.72e-12,361;CL:0000624,2.29e-12,6;CL:0000838,4.15e-12,52;CL:0000542,8.50e-12,53;CL:0000051,8.50e-12,53;CL:0000048,6.34e-11,427;CL:0000219,1.13e-10,386;CL:0000723,1.42e-10,433;CL:0000623,2.93e-10,3;CL:0000825,2.93e-10,3;CL:0000034,4.02e-10,441;CL:0000084,4.46e-10,25;CL:0000827,4.46e-10,25;CL:0000226,1.32e-08,3;CL:0000842,1.32e-08,3;CL:0000784,3.17e-08,3;CL:0001014,5.08e-07,2;CL:0001016,5.08e-07,2;CL:0000625,9.27e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.36e-25;42!CL:0000790;1.06e-14;18!CL:0000051;1.57e-07;53!CL:0000049;9.82e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.78e-19!102;UBERON:0003061!4.78e-19!102;UBERON:0002371!7.21e-19!80;UBERON:0001474!6.77e-18!86;UBERON:0002384!9.70e-17!375;UBERON:0002193!3.27e-16!112;UBERON:0004765!3.63e-16!101;UBERON:0001434!3.63e-16!101;UBERON:0002204!1.13e-12!167;UBERON:0002405!2.57e-11!115;UBERON:0003081!6.62e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.40e-26,76;UBERON:0002390,6.90e-25,98;UBERON:0003061,6.90e-25,98;UBERON:0001474,1.09e-23,82;UBERON:0002193,9.61e-22,108;UBERON:0002405,1.19e-21,93;UBERON:0004765,7.16e-21,90;UBERON:0001434,5.47e-18,100;UBERON:0002384,8.72e-12,371;UBERON:0002204,5.50e-10,167;UBERON:0003081,1.29e-09,203 | |||
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| |||
|short_description=p11@VIM | |||
}} |
Revision as of 12:41, 10 September 2013
Short description: | p11@VIM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_VIM_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 189bp_to_ENST00000469543_5end |
EntrezGene: | VIM |
HGNC: | 12692 |
UniProt: | B0YJC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.40e-26 | 76 |
hematopoietic system | 6.90e-25 | 98 |
blood island | 6.90e-25 | 98 |
bone element | 1.09e-23 | 82 |
hemolymphoid system | 9.61e-22 | 108 |
immune system | 1.19e-21 | 93 |
skeletal element | 7.16e-21 | 90 |
skeletal system | 5.47e-18 | 100 |
connective tissue | 8.72e-12 | 371 |
musculoskeletal system | 5.50e-10 | 167 |
lateral plate mesoderm | 1.29e-09 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.