FFCP PHASE1:Hg19::chr10:135139745..135139753,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50632|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17938|TSSclassifier=S|UniProt=|association_with_transcript=64bp_to_ENST00000467611_5end|coexpression_cluster_id=C2993|description=CAGE_peak_4_at_CALY_5end|id=chr10:135139745..135139753,-|ontology_enrichment_celltype=CL:0002322!2.57e-10!5|ontology_enrichment_celltype_v019=CL:0002553;1.72e-14;1!CL:0002581;1.72e-14;1!CL:0000333;1.21e-11;5|ontology_enrichment_celltype_v019_2=CL:0002553,1.23e-14,1;CL:0002581,2.11e-14,1|ontology_enrichment_development_v019=UBERON:0006215;9.49e-19;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;7.42e-10;6|ontology_enrichment_disease_v019_2=DOID:169,6.21e-10,6|ontology_enrichment_uberon=UBERON:0000073!3.23e-20!94;UBERON:0001016!3.23e-20!94;UBERON:0005743!1.05e-18!86;UBERON:0001017!2.87e-17!82;UBERON:0001049!8.00e-15!57;UBERON:0005068!8.00e-15!57;UBERON:0006241!8.00e-15!57;UBERON:0007135!8.00e-15!57;UBERON:0000955!1.51e-13!69;UBERON:0006238!1.51e-13!69;UBERON:0002346!8.82e-13!90;UBERON:0003075!1.22e-12!86;UBERON:0007284!1.22e-12!86;UBERON:0002616!1.87e-11!59;UBERON:0001950!3.38e-11!20;UBERON:0002619!5.63e-10!22;UBERON:0007023!9.83e-10!115;UBERON:0003076!1.28e-09!15;UBERON:0003057!1.28e-09!15;UBERON:0000924!5.08e-09!173;UBERON:0006601!5.08e-09!173;UBERON:0004121!8.67e-09!169;UBERON:0000956!1.67e-08!25;UBERON:0000203!1.67e-08!25;UBERON:0001869!2.12e-08!32;UBERON:0002780!3.75e-08!41;UBERON:0001890!3.75e-08!41;UBERON:0006240!3.75e-08!41;UBERON:0003080!7.10e-08!42;UBERON:0000033!7.28e-08!123;UBERON:0001893!9.76e-08!34;UBERON:0002020!9.95e-08!34;UBERON:0003528!9.95e-08!34;UBERON:0003056!1.03e-07!61;UBERON:0004733!1.54e-07!12;UBERON:0002028!1.54e-07!12;UBERON:0007277!1.54e-07!12;UBERON:0000153!3.68e-07!129;UBERON:0007811!3.68e-07!129;UBERON:0001872!3.96e-07!5;UBERON:0002791!6.76e-07!33;UBERON:0004732!7.20e-07!13|ontology_enrichment_uberon_v019=UBERON:0000013;1.21e-11;5!UBERON:0002410;1.21e-11;5!UBERON:0002037;7.42e-10;6!UBERON:0005406;6.80e-08;2!UBERON:0002680;7.42e-07;9!UBERON:0000010;7.42e-07;8!UBERON:0001895;7.42e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.77e-12,5;UBERON:0002410,9.77e-12,5;UBERON:0002037,7.10e-10,6;UBERON:0006215,7.10e-10,6;UBERON:0005406,7.52e-08,2;UBERON:0000010,6.60e-07,8;UBERON:0002680,7.21e-07,9;UBERON:0001895,7.21e-07,9;UBERON:0010092,7.21e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0.609868530647977,0.132529768321485,0.232387885739037,0.207322110030741,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59343505848134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0.409074730008619,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.442317039724898,2.95547618953547,0.87754158861589,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.372578417648301,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,2.26432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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=50632 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17938 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=64bp_to_ENST00000467611_5end | |||
|coexpression_cluster_id=C2993 | |||
|description=CAGE_peak_4_at_CALY_5end | |||
|id=chr10:135139745..135139753,- | |||
|ontology_enrichment_celltype=CL:0002322!2.57e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.72e-14;1!CL:0002581;1.72e-14;1!CL:0000333;1.21e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.23e-14,1;CL:0002581,2.11e-14,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.49e-19;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;7.42e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.21e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.23e-20!94;UBERON:0001016!3.23e-20!94;UBERON:0005743!1.05e-18!86;UBERON:0001017!2.87e-17!82;UBERON:0001049!8.00e-15!57;UBERON:0005068!8.00e-15!57;UBERON:0006241!8.00e-15!57;UBERON:0007135!8.00e-15!57;UBERON:0000955!1.51e-13!69;UBERON:0006238!1.51e-13!69;UBERON:0002346!8.82e-13!90;UBERON:0003075!1.22e-12!86;UBERON:0007284!1.22e-12!86;UBERON:0002616!1.87e-11!59;UBERON:0001950!3.38e-11!20;UBERON:0002619!5.63e-10!22;UBERON:0007023!9.83e-10!115;UBERON:0003076!1.28e-09!15;UBERON:0003057!1.28e-09!15;UBERON:0000924!5.08e-09!173;UBERON:0006601!5.08e-09!173;UBERON:0004121!8.67e-09!169;UBERON:0000956!1.67e-08!25;UBERON:0000203!1.67e-08!25;UBERON:0001869!2.12e-08!32;UBERON:0002780!3.75e-08!41;UBERON:0001890!3.75e-08!41;UBERON:0006240!3.75e-08!41;UBERON:0003080!7.10e-08!42;UBERON:0000033!7.28e-08!123;UBERON:0001893!9.76e-08!34;UBERON:0002020!9.95e-08!34;UBERON:0003528!9.95e-08!34;UBERON:0003056!1.03e-07!61;UBERON:0004733!1.54e-07!12;UBERON:0002028!1.54e-07!12;UBERON:0007277!1.54e-07!12;UBERON:0000153!3.68e-07!129;UBERON:0007811!3.68e-07!129;UBERON:0001872!3.96e-07!5;UBERON:0002791!6.76e-07!33;UBERON:0004732!7.20e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.21e-11;5!UBERON:0002410;1.21e-11;5!UBERON:0002037;7.42e-10;6!UBERON:0005406;6.80e-08;2!UBERON:0002680;7.42e-07;9!UBERON:0000010;7.42e-07;8!UBERON:0001895;7.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.77e-12,5;UBERON:0002410,9.77e-12,5;UBERON:0002037,7.10e-10,6;UBERON:0006215,7.10e-10,6;UBERON:0005406,7.52e-08,2;UBERON:0000010,6.60e-07,8;UBERON:0002680,7.21e-07,9;UBERON:0001895,7.21e-07,9;UBERON:0010092,7.21e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0.609868530647977,0.132529768321485,0.232387885739037,0.207322110030741,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59343505848134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0.409074730008619,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.442317039724898,2.95547618953547,0.87754158861589,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.372578417648301,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,2.26432103933032,0,1.63814457288021,0,0,0.247871528518004,0,0,0,1.60114149657094,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.345786262321089,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,1.56215619722769,0,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.135939465953663,0.197318320688547,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,1.58013611732727,2.20858708199438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.594600453887843,0,0,0.603851374266694,0,0.218559560503957,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0.218531143927391,1.0135880080915,0,0,0.18378979906969,0,0.0757786982182394,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@CALY | |||
}} |
Revision as of 12:29, 10 September 2013
Short description: | p4@CALY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CALY_5end |
Coexpression cluster: | C2993_Wilms_rhabdomyosarcoma_neuroblastoma_retinoblastoma_brain_cerebellum_teratocarcinoma |
Association with transcript: | 64bp_to_ENST00000467611_5end |
EntrezGene: | CALY |
HGNC: | 17938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.23e-14 | 1 |
perirenal preadipocyte | 2.11e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 9.77e-12 | 5 |
autonomic nervous system | 9.77e-12 | 5 |
cerebellum | 7.10e-10 | 6 |
rhombic lip | 7.10e-10 | 6 |
perirenal fat | 7.52e-08 | 2 |
peripheral nervous system | 6.60e-07 | 8 |
regional part of metencephalon | 7.21e-07 | 9 |
metencephalon | 7.21e-07 | 9 |
future metencephalon | 7.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.21e-10 | 6 |
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