FFCP PHASE1:Hg19::chr10:125757656..125757678,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr10:125757656..125757678,+|id=chr10:125757656..125757678,+|ontology_enrichment_celltype=CL:0002057!4.07e-85!42;CL:0000860!6.03e-79!45;CL:0000766!1.61e-64!76;CL:0002194!2.70e-53!63;CL:0000576!2.70e-53!63;CL:0000040!2.70e-53!63;CL:0000559!2.70e-53!63;CL:0002009!1.88e-51!65;CL:0000839!2.64e-47!70;CL:0000557!1.52e-46!71;CL:0000738!3.53e-42!140;CL:0000763!2.89e-41!112;CL:0000049!2.89e-41!112;CL:0002393!4.90e-36!9;CL:0002397!4.90e-36!9;CL:0002087!3.63e-33!119;CL:0000037!1.08e-32!172;CL:0000566!1.08e-32!172;CL:0000988!2.08e-30!182;CL:0002032!5.26e-27!165;CL:0000837!5.26e-27!165;CL:0002031!2.02e-25!124;CL:0000094!3.13e-19!8;CL:0000775!3.34e-14!3;CL:0000081!8.53e-14!11;CL:0000842!3.84e-13!3;CL:0000875!1.72e-12!3;CL:0002396!1.72e-12!3;CL:0000134!5.21e-11!358;CL:0002320!1.27e-10!365;CL:0000224!5.72e-10!4;CL:0000219!2.89e-09!390;CL:0000034!9.17e-08!444;CL:0000048!1.20e-07!430;CL:0000723!2.04e-07!436;CL:0000080!8.91e-07!6|ontology_enrichment_celltype_v019=CL:0002393;1.19e-42;6!CL:0002397;1.19e-42;6!CL:0000775;2.31e-23;3!CL:0000094;3.86e-23;8!CL:0000766;8.22e-21;69!CL:0000576;1.97e-20;48!CL:0000081;8.60e-17;11!CL:0000860;3.59e-14;33!CL:0002057;3.59e-14;33!CL:0000226;1.28e-10;3!CL:0000842;1.28e-10;3!CL:0000473;1.92e-10;39!CL:0000234;1.92e-10;39!CL:0000763;1.30e-09;100!CL:0002087;9.32e-09;104|ontology_enrichment_celltype_v019_2=CL:0000860,4.35e-40,42;CL:0002057,4.35e-40,42;CL:0000766,1.88e-39,72;CL:0002393,4.62e-38,9;CL:0002397,4.62e-38,9;CL:0000473,1.05e-34,48;CL:0000234,1.05e-34,48;CL:0002194,3.68e-27,59;CL:0000576,3.68e-27,59;CL:0000040,3.68e-27,59;CL:0000559,3.68e-27,59;CL:0002009,3.46e-26,61;CL:0000763,3.78e-25,108;CL:0000049,3.78e-25,108;CL:0000839,5.25e-24,66;CL:0000738,1.23e-23,136;CL:0000557,1.31e-23,67;CL:0000775,2.32e-23,3;CL:0000094,2.88e-23,8;CL:0000037,2.26e-18,168;CL:0000988,3.13e-17,177;CL:0000081,6.97e-17,11;CL:0002087,2.08e-16,115;CL:0002032,1.23e-15,161;CL:0000837,1.23e-15,161;CL:0002031,6.22e-12,120;CL:0000226,1.11e-10,3;CL:0000842,1.11e-10,3|ontology_enrichment_development_v019=CL:0002057;1.31e-26;42!CL:0000049;7.93e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.41e-57!102;UBERON:0003061!1.41e-57!102;UBERON:0002193!1.08e-51!112;UBERON:0002371!1.52e-40!80;UBERON:0001474!3.11e-37!86;UBERON:0004765!1.15e-30!101;UBERON:0001434!1.15e-30!101;UBERON:0002405!4.54e-26!115;UBERON:0000178!1.12e-25!15;UBERON:0000179!1.12e-25!15;UBERON:0000463!1.12e-25!15;UBERON:0003081!1.31e-22!216;UBERON:0002204!9.81e-16!167;UBERON:0002384!4.25e-10!375|ontology_enrichment_uberon_v019=UBERON:0000178;1.53e-22;15!UBERON:0000179;1.53e-22;15!UBERON:0000463;1.53e-22;15!UBERON:0002390;4.82e-10;32!UBERON:0002193;4.89e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.54e-34,98;UBERON:0003061,8.54e-34,98;UBERON:0002193,2.54e-30,108;UBERON:0000178,1.80e-22,15;UBERON:0000179,1.80e-22,15;UBERON:0000463,1.80e-22,15;UBERON:0002371,1.71e-20,76;UBERON:0001474,8.59e-19,82;UBERON:0004765,7.15e-17,90;UBERON:0002405,3.09e-16,93;UBERON:0001434,6.71e-15,100;UBERON:0003081,2.88e-14,203;UBERON:0002204,9.51e-08,167;UBERON:0000926,1.07e-07,315;UBERON:0004120,1.07e-07,315;UBERON:0006603,1.07e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91914699048606,0.928896739896456,0,0,0,0,0,0,5.53995408531877,4.21143339687298,4.55722828503289,0,0,0,0.145398238779565,0,0,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,2.75796544589295,1.93645405075148,0,0.752969358170419,0,1.12361742222542,0.918251677112708,4.8139354061414,1.27867425159808,0,0,0,0.870627715885752,0.56738522469114,0,0.502497330513487,0,0,1.21079900526674,0.368277635987565,1.89877432464531,1.05627643155971,1.91343869968539,1.25795187305026,1.68492946719743,1.05123824989054,0.964353520182481,0.855038231223746,1.19350006319454,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1314542666882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,20.9721966705211,20.9413021442817,28.5946704270864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,5.1771408196468,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:125757656..125757678,+ | |||
|id=chr10:125757656..125757678,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.07e-85!42;CL:0000860!6.03e-79!45;CL:0000766!1.61e-64!76;CL:0002194!2.70e-53!63;CL:0000576!2.70e-53!63;CL:0000040!2.70e-53!63;CL:0000559!2.70e-53!63;CL:0002009!1.88e-51!65;CL:0000839!2.64e-47!70;CL:0000557!1.52e-46!71;CL:0000738!3.53e-42!140;CL:0000763!2.89e-41!112;CL:0000049!2.89e-41!112;CL:0002393!4.90e-36!9;CL:0002397!4.90e-36!9;CL:0002087!3.63e-33!119;CL:0000037!1.08e-32!172;CL:0000566!1.08e-32!172;CL:0000988!2.08e-30!182;CL:0002032!5.26e-27!165;CL:0000837!5.26e-27!165;CL:0002031!2.02e-25!124;CL:0000094!3.13e-19!8;CL:0000775!3.34e-14!3;CL:0000081!8.53e-14!11;CL:0000842!3.84e-13!3;CL:0000875!1.72e-12!3;CL:0002396!1.72e-12!3;CL:0000134!5.21e-11!358;CL:0002320!1.27e-10!365;CL:0000224!5.72e-10!4;CL:0000219!2.89e-09!390;CL:0000034!9.17e-08!444;CL:0000048!1.20e-07!430;CL:0000723!2.04e-07!436;CL:0000080!8.91e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.19e-42;6!CL:0002397;1.19e-42;6!CL:0000775;2.31e-23;3!CL:0000094;3.86e-23;8!CL:0000766;8.22e-21;69!CL:0000576;1.97e-20;48!CL:0000081;8.60e-17;11!CL:0000860;3.59e-14;33!CL:0002057;3.59e-14;33!CL:0000226;1.28e-10;3!CL:0000842;1.28e-10;3!CL:0000473;1.92e-10;39!CL:0000234;1.92e-10;39!CL:0000763;1.30e-09;100!CL:0002087;9.32e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.35e-40,42;CL:0002057,4.35e-40,42;CL:0000766,1.88e-39,72;CL:0002393,4.62e-38,9;CL:0002397,4.62e-38,9;CL:0000473,1.05e-34,48;CL:0000234,1.05e-34,48;CL:0002194,3.68e-27,59;CL:0000576,3.68e-27,59;CL:0000040,3.68e-27,59;CL:0000559,3.68e-27,59;CL:0002009,3.46e-26,61;CL:0000763,3.78e-25,108;CL:0000049,3.78e-25,108;CL:0000839,5.25e-24,66;CL:0000738,1.23e-23,136;CL:0000557,1.31e-23,67;CL:0000775,2.32e-23,3;CL:0000094,2.88e-23,8;CL:0000037,2.26e-18,168;CL:0000988,3.13e-17,177;CL:0000081,6.97e-17,11;CL:0002087,2.08e-16,115;CL:0002032,1.23e-15,161;CL:0000837,1.23e-15,161;CL:0002031,6.22e-12,120;CL:0000226,1.11e-10,3;CL:0000842,1.11e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-26;42!CL:0000049;7.93e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.41e-57!102;UBERON:0003061!1.41e-57!102;UBERON:0002193!1.08e-51!112;UBERON:0002371!1.52e-40!80;UBERON:0001474!3.11e-37!86;UBERON:0004765!1.15e-30!101;UBERON:0001434!1.15e-30!101;UBERON:0002405!4.54e-26!115;UBERON:0000178!1.12e-25!15;UBERON:0000179!1.12e-25!15;UBERON:0000463!1.12e-25!15;UBERON:0003081!1.31e-22!216;UBERON:0002204!9.81e-16!167;UBERON:0002384!4.25e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.53e-22;15!UBERON:0000179;1.53e-22;15!UBERON:0000463;1.53e-22;15!UBERON:0002390;4.82e-10;32!UBERON:0002193;4.89e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.54e-34,98;UBERON:0003061,8.54e-34,98;UBERON:0002193,2.54e-30,108;UBERON:0000178,1.80e-22,15;UBERON:0000179,1.80e-22,15;UBERON:0000463,1.80e-22,15;UBERON:0002371,1.71e-20,76;UBERON:0001474,8.59e-19,82;UBERON:0004765,7.15e-17,90;UBERON:0002405,3.09e-16,93;UBERON:0001434,6.71e-15,100;UBERON:0003081,2.88e-14,203;UBERON:0002204,9.51e-08,167;UBERON:0000926,1.07e-07,315;UBERON:0004120,1.07e-07,315;UBERON:0006603,1.07e-07,315 | |||
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|short_description=p@chr10:125757656..125757678,+ | |||
}} |
Revision as of 12:10, 10 September 2013
Short description: | p@chr10:125757656..125757678, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:125757656..125757678, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.35e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.35e-40 | 42 |
myeloid leukocyte | 1.88e-39 | 72 |
intermediate monocyte | 4.62e-38 | 9 |
CD14-positive, CD16-positive monocyte | 4.62e-38 | 9 |
defensive cell | 1.05e-34 | 48 |
phagocyte | 1.05e-34 | 48 |
monopoietic cell | 3.68e-27 | 59 |
monocyte | 3.68e-27 | 59 |
monoblast | 3.68e-27 | 59 |
promonocyte | 3.68e-27 | 59 |
macrophage dendritic cell progenitor | 3.46e-26 | 61 |
myeloid cell | 3.78e-25 | 108 |
common myeloid progenitor | 3.78e-25 | 108 |
myeloid lineage restricted progenitor cell | 5.25e-24 | 66 |
leukocyte | 1.23e-23 | 136 |
granulocyte monocyte progenitor cell | 1.31e-23 | 67 |
neutrophil | 2.32e-23 | 3 |
granulocyte | 2.88e-23 | 8 |
hematopoietic stem cell | 2.26e-18 | 168 |
hematopoietic cell | 3.13e-17 | 177 |
blood cell | 6.97e-17 | 11 |
nongranular leukocyte | 2.08e-16 | 115 |
hematopoietic oligopotent progenitor cell | 1.23e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 6.22e-12 | 120 |
single nucleate cell | 1.11e-10 | 3 |
mononuclear cell | 1.11e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.54e-34 | 98 |
blood island | 8.54e-34 | 98 |
hemolymphoid system | 2.54e-30 | 108 |
blood | 1.80e-22 | 15 |
haemolymphatic fluid | 1.80e-22 | 15 |
organism substance | 1.80e-22 | 15 |
bone marrow | 1.71e-20 | 76 |
bone element | 8.59e-19 | 82 |
skeletal element | 7.15e-17 | 90 |
immune system | 3.09e-16 | 93 |
skeletal system | 6.71e-15 | 100 |
lateral plate mesoderm | 2.88e-14 | 203 |
musculoskeletal system | 9.51e-08 | 167 |
mesoderm | 1.07e-07 | 315 |
mesoderm-derived structure | 1.07e-07 | 315 |
presumptive mesoderm | 1.07e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.