FFCP PHASE1:Hg19::chr10:121652192..121652203,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11196|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17018|TSSclassifier=S|UniProt=Q9Y6Y8|association_with_transcript=-19bp_to_ENST00000369075,uc001leu.1,uc010qtc.1_5end|description=CAGE_peak_2_at_SEC23IP_5end|id=chr10:121652192..121652203,+|ontology_enrichment_celltype=CL:0000542!6.11e-15!53;CL:0000051!6.11e-15!53;CL:0000838!1.30e-14!52;CL:0000791!3.70e-09!18;CL:0000789!3.70e-09!18;CL:0002420!3.70e-09!18;CL:0002419!3.70e-09!18;CL:0000790!3.70e-09!18;CL:0000084!4.65e-09!25;CL:0000827!4.65e-09!25;CL:0000037!1.36e-08!172;CL:0000566!1.36e-08!172;CL:0000988!1.86e-07!182;CL:0002032!3.30e-07!165;CL:0000837!3.30e-07!165|ontology_enrichment_celltype_v019=CL:0000791;2.87e-12;18!CL:0000789;2.87e-12;18!CL:0002419;2.87e-12;18!CL:0000084;1.69e-11;25!CL:0000542;6.00e-10;53!CL:0000625;6.15e-10;11!CL:0000945;5.38e-07;24|ontology_enrichment_celltype_v019_2=CL:0000542,5.37e-17,53;CL:0000051,5.37e-17,53;CL:0000838,1.78e-16,52;CL:0000791,5.25e-12,18;CL:0000789,5.25e-12,18;CL:0002420,5.25e-12,18;CL:0002419,5.25e-12,18;CL:0000790,5.25e-12,18;CL:0000084,2.59e-11,25;CL:0000827,2.59e-11,25;CL:0000037,4.06e-10,168;CL:0000625,5.09e-10,11;CL:0000988,4.19e-09,177;CL:0002032,1.68e-08,161;CL:0000837,1.68e-08,161;CL:0000945,3.81e-07,24;CL:0000826,3.81e-07,24|ontology_enrichment_development_v019=CL:0000790;2.87e-12;18!CL:0000051;6.00e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2531,1.41e-08,51;DOID:0060083,1.41e-08,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.54503513781167,0.214100523890983,1.26858963686374,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0.436882744260345,0.527533956456907,0.247532705920093,0,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0.251085279189606,0.840547463227464,1.06730766284929,0.787107813136792,0,0.383829398097213,0.77408061658038,0,0.30120591877825,0,1.08454080812422,2.13253848731132,1.76160263600908,0,0.802177789880567,0.434021741431704,0,1.6194683300949,1.03030227053675,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,1.23350366406548,0.929119112685311,0.28769239232215,0.768482119587302,0.236482229888585,0,0,0,0.376484679085209,0,0.449446968890169,0,0.320929027076094,0.639337125799041,0.989553900560148,0.398927315243264,0.852449501065388,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0.633765858935825,0.212604299965044,0.419317291016752,1.01095768031846,0.150176892841506,0.32145117339416,0.285012743741249,0.79566670879636,1.27864907635244,3.51992488922645,1.09227722252426,0.889509253863555,1.70692089026603,2.00197993518006,0,0.661044872784862,0.954053754535364,1.1384259382189,2.34894875748376,2.6759125968766,3.96513985737078,1.12101712596307,1.58030450865046,2.16380747125216,2.35806457649499,1.02800749499755,2.17342444007882,0.977766799900771,1.4203434172042,1.94826728407911,2.1167986808183,4.12448270464772,2.87994062958707,4.60366568400527,2.81800903396485,1.95089021339817,2.63100647365882,4.14525026678773,2.02862160014537,3.11401782640327,2.94294910898684,3.1360657141493,3.39928028092699,2.29932296161153,2.40539211837841,4.04831507231205,4.77848121486145,1.30216690771284,1.90090408889675,2.10805166708882,2.94369205655162,1.24930726552346,3.55165878066025,1.64225599384209,1.00803371612366,2.40696176205157,1.30341963494519,0,0.670700859703636,0.511450247374121,1.0843174571537,1.00267582127178,0,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.458426764241994,0,0,0,0.348259474598534,0.26591592103773,1.66943437013739,1.14398982156026,2.22874500797739,0,0,0,0.56530794192401,0.838998872419812,0.825354125820202,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0,1.10298924103761,0.81014194788176,0,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.379891534993739,1.19168262731897,0.573673241497627,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0.404132016209064,0.490385709340376,0.151357427644931,1.15235184896,0.234321431833797,0.312160076830321,0.570471821544449,0.597794722207204,0.23486899728753,0.485618833104395,0.421352420106746,1.02077085627447,0.245668634623536,0.309977343527296,2.37600571456411,0.741800787835671,0,0,0.336672227908132,1.00094815897571,0.277064115484183,0,0.612975591598039,0.300476117813194,0.113432183160021,0.358779271377724,0.427114777637135,0.423863802319124,0.600182192168805,0.206105058476878,1.8034837803194,1.11670113798954,0.337552664482532,0.584622030967192,0.504867548488229,0.736399189138395,0.646584227275248,0.355009592516614,0.302256294682921,0.169560592310488,0,0.818238361772504,0.860413786167011,0.243947412259191,0.265059536642971,0.348581828608555,0.725627385107593,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0.928735856063958,1.44375896333917,0.591534000199219,0.337169380156203,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.13483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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11196 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17018 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y6Y8 | |||
|association_with_transcript=-19bp_to_ENST00000369075,uc001leu.1,uc010qtc.1_5end | |||
|description=CAGE_peak_2_at_SEC23IP_5end | |||
|id=chr10:121652192..121652203,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.11e-15!53;CL:0000051!6.11e-15!53;CL:0000838!1.30e-14!52;CL:0000791!3.70e-09!18;CL:0000789!3.70e-09!18;CL:0002420!3.70e-09!18;CL:0002419!3.70e-09!18;CL:0000790!3.70e-09!18;CL:0000084!4.65e-09!25;CL:0000827!4.65e-09!25;CL:0000037!1.36e-08!172;CL:0000566!1.36e-08!172;CL:0000988!1.86e-07!182;CL:0002032!3.30e-07!165;CL:0000837!3.30e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.87e-12;18!CL:0000789;2.87e-12;18!CL:0002419;2.87e-12;18!CL:0000084;1.69e-11;25!CL:0000542;6.00e-10;53!CL:0000625;6.15e-10;11!CL:0000945;5.38e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.37e-17,53;CL:0000051,5.37e-17,53;CL:0000838,1.78e-16,52;CL:0000791,5.25e-12,18;CL:0000789,5.25e-12,18;CL:0002420,5.25e-12,18;CL:0002419,5.25e-12,18;CL:0000790,5.25e-12,18;CL:0000084,2.59e-11,25;CL:0000827,2.59e-11,25;CL:0000037,4.06e-10,168;CL:0000625,5.09e-10,11;CL:0000988,4.19e-09,177;CL:0002032,1.68e-08,161;CL:0000837,1.68e-08,161;CL:0000945,3.81e-07,24;CL:0000826,3.81e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.87e-12;18!CL:0000051;6.00e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.41e-08,51;DOID:0060083,1.41e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@SEC23IP | |||
}} |
Revision as of 12:03, 10 September 2013
Short description: | p2@SEC23IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SEC23IP_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000369075, uc001leu.1, uc010qtc.1_5end |
EntrezGene: | SEC23IP |
HGNC: | 17018 |
UniProt: | Q9Y6Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.37e-17 | 53 |
common lymphoid progenitor | 5.37e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.78e-16 | 52 |
mature alpha-beta T cell | 5.25e-12 | 18 |
alpha-beta T cell | 5.25e-12 | 18 |
immature T cell | 5.25e-12 | 18 |
mature T cell | 5.25e-12 | 18 |
immature alpha-beta T cell | 5.25e-12 | 18 |
T cell | 2.59e-11 | 25 |
pro-T cell | 2.59e-11 | 25 |
hematopoietic stem cell | 4.06e-10 | 168 |
CD8-positive, alpha-beta T cell | 5.09e-10 | 11 |
hematopoietic cell | 4.19e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.68e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-08 | 161 |
lymphocyte of B lineage | 3.81e-07 | 24 |
pro-B cell | 3.81e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.41e-08 | 51 |
immune system cancer | 1.41e-08 | 51 |
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