FFCP PHASE1:Hg19::chr10:120840417..120840446,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:120840417..120840446,+|id=chr10:120840417..120840446,+|ontology_enrichment_celltype=CL:0000738!4.20e-11!140;CL:0000791!4.34e-11!18;CL:0000789!4.34e-11!18;CL:0002420!4.34e-11!18;CL:0002419!4.34e-11!18;CL:0000790!4.34e-11!18;CL:0000988!4.32e-10!182;CL:0000838!6.84e-10!52;CL:0000037!7.97e-10!172;CL:0000566!7.97e-10!172;CL:0000542!1.33e-09!53;CL:0000051!1.33e-09!53;CL:0002031!4.30e-09!124;CL:0002032!5.91e-08!165;CL:0000837!5.91e-08!165;CL:0002087!1.12e-07!119;CL:0000625!1.34e-07!11;CL:0000084!2.14e-07!25;CL:0000827!2.14e-07!25|ontology_enrichment_celltype_v019=CL:0000791;1.79e-20;18!CL:0000789;1.79e-20;18!CL:0002419;1.79e-20;18!CL:0000084;4.89e-15;25!CL:0000625;5.78e-13;11!CL:0000624;7.63e-11;6!CL:0002393;4.39e-09;6!CL:0002397;4.39e-09;6!CL:0000542;8.49e-09;53|ontology_enrichment_celltype_v019_2=CL:0000791,4.66e-21,18;CL:0000789,4.66e-21,18;CL:0002420,4.66e-21,18;CL:0002419,4.66e-21,18;CL:0000790,4.66e-21,18;CL:0000738,6.27e-16,136;CL:0000084,1.64e-15,25;CL:0000827,1.64e-15,25;CL:0000838,2.87e-15,52;CL:0000542,8.03e-15,53;CL:0000051,8.03e-15,53;CL:0000037,1.10e-13,168;CL:0000988,1.52e-13,177;CL:0000625,2.16e-13,11;CL:0002031,1.55e-12,120;CL:0000624,4.98e-11,6;CL:0002087,8.73e-11,115;CL:0002032,1.14e-10,161;CL:0000837,1.14e-10,161;CL:0002393,1.27e-07,9;CL:0002397,1.27e-07,9|ontology_enrichment_development_v019=CL:0000790;1.79e-20;18!CL:0000051;8.49e-09;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.49e-09!57;UBERON:0005068!9.49e-09!57;UBERON:0006241!9.49e-09!57;UBERON:0007135!9.49e-09!57;UBERON:0002616!3.50e-08!59;UBERON:0003080!5.64e-07!42;UBERON:0002780!8.89e-07!41;UBERON:0001890!8.89e-07!41;UBERON:0006240!8.89e-07!41|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,1.0007329835313,1.78784437770915,0,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.861847406537515,0.204000691244253,0.626909442956176,0.572471974262113,0.410623275218653,0.125542639594803,0.840547463227464,0.985207073399349,1.02324015707783,4.32700704533794,0.767658796194425,1.85779347979291,0,0.6024118375565,0.739508020333575,0.387336002901508,0.568676929949686,2.05520307534393,2.21598163412751,2.4065333696417,3.03815219002193,0.447830948479849,0.647787332037959,0,1.01778767145695,0.377875943688809,0.727752183563449,0,0.411167888021826,0.929119112685311,0.28769239232215,0.512321413058201,0.709446689665756,0.344745680736619,0.645484683583826,0,0.564727018627814,0.272906150057846,0.224723484445085,0,0,1.27867425159808,0,0,0,0.580418477257168,0.56738522469114,0,0.75374599577023,0.521482918420201,0.65156653411535,1.21079900526674,0,0,1.90129757680748,1.27562579979026,1.46761051855863,1.90958672949042,0.901061357049038,0.32145117339416,1.14005097496499,0.79566670879636,0.730656615058536,3.51992488922645,2.18455444504853,0.889509253863555,0.426730222566507,1.20118796110804,1.72425731986345,0,0,2.27685187643779,0,0.382273228125229,2.64342657158052,1.12101712596307,1.31692042387539,3.34406609193516,3.93010762749165,2.87842098599313,3.17654341242288,5.86660079940463,5.20792586308207,3.89653456815823,2.00538822393312,3.82987679717288,5.31681347000691,5.1452734115353,1.79327847615945,2.73124629875744,1.15106533222573,1.93445012450094,2.02862160014537,2.07601188426885,1.87278579662799,2.09071047609954,2.03956816855619,2.68254345521345,2.74901956386104,5.31341353240956,1.59282707162048,2.60433381542567,0.950452044448374,3.16207750063323,1.66382594500744,1.24930726552346,1.89421801635213,4.10563998460523,2.82249440514625,2.13952156626806,2.31719046212478,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.567208902984407,1.10864698731282,0.087834785693126,0.916853528483988,0,0.370784442784429,0,0.174129737299267,0,1.66943437013739,1.71598473234038,1.48583000531826,0.39752481473341,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.626984899610432,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,3.87780264148325,0,0,0,1.72131935057184,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0.561803226808994,0.61246251376468,0.368502951935304,0.619954687054593,0,0,0,0,0.505008341862199,0.750711119231785,0.554128230968366,0,0,0.600952235626387,0.226864366320042,0.717558542755448,0.213557388818567,0.423863802319124,0.900273288253207,0.515262646192195,0.515281080091258,1.30281799432113,0,0.389748020644795,0,0.460249493211497,0.969876340912871,0.710019185033229,0.302256294682921,0.339121184620975,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:120840417..120840446,+ | |||
|id=chr10:120840417..120840446,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.20e-11!140;CL:0000791!4.34e-11!18;CL:0000789!4.34e-11!18;CL:0002420!4.34e-11!18;CL:0002419!4.34e-11!18;CL:0000790!4.34e-11!18;CL:0000988!4.32e-10!182;CL:0000838!6.84e-10!52;CL:0000037!7.97e-10!172;CL:0000566!7.97e-10!172;CL:0000542!1.33e-09!53;CL:0000051!1.33e-09!53;CL:0002031!4.30e-09!124;CL:0002032!5.91e-08!165;CL:0000837!5.91e-08!165;CL:0002087!1.12e-07!119;CL:0000625!1.34e-07!11;CL:0000084!2.14e-07!25;CL:0000827!2.14e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.79e-20;18!CL:0000789;1.79e-20;18!CL:0002419;1.79e-20;18!CL:0000084;4.89e-15;25!CL:0000625;5.78e-13;11!CL:0000624;7.63e-11;6!CL:0002393;4.39e-09;6!CL:0002397;4.39e-09;6!CL:0000542;8.49e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.66e-21,18;CL:0000789,4.66e-21,18;CL:0002420,4.66e-21,18;CL:0002419,4.66e-21,18;CL:0000790,4.66e-21,18;CL:0000738,6.27e-16,136;CL:0000084,1.64e-15,25;CL:0000827,1.64e-15,25;CL:0000838,2.87e-15,52;CL:0000542,8.03e-15,53;CL:0000051,8.03e-15,53;CL:0000037,1.10e-13,168;CL:0000988,1.52e-13,177;CL:0000625,2.16e-13,11;CL:0002031,1.55e-12,120;CL:0000624,4.98e-11,6;CL:0002087,8.73e-11,115;CL:0002032,1.14e-10,161;CL:0000837,1.14e-10,161;CL:0002393,1.27e-07,9;CL:0002397,1.27e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;1.79e-20;18!CL:0000051;8.49e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.49e-09!57;UBERON:0005068!9.49e-09!57;UBERON:0006241!9.49e-09!57;UBERON:0007135!9.49e-09!57;UBERON:0002616!3.50e-08!59;UBERON:0003080!5.64e-07!42;UBERON:0002780!8.89e-07!41;UBERON:0001890!8.89e-07!41;UBERON:0006240!8.89e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,1.0007329835313,1.78784437770915,0,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.861847406537515,0.204000691244253,0.626909442956176,0.572471974262113,0.410623275218653,0.125542639594803,0.840547463227464,0.985207073399349,1.02324015707783,4.32700704533794,0.767658796194425,1.85779347979291,0,0.6024118375565,0.739508020333575,0.387336002901508,0.568676929949686,2.05520307534393,2.21598163412751,2.4065333696417,3.03815219002193,0.447830948479849,0.647787332037959,0,1.01778767145695,0.377875943688809,0.727752183563449,0,0.411167888021826,0.929119112685311,0.28769239232215,0.512321413058201,0.709446689665756,0.344745680736619,0.645484683583826,0,0.564727018627814,0.272906150057846,0.224723484445085,0,0,1.27867425159808,0,0,0,0.580418477257168,0.56738522469114,0,0.75374599577023,0.521482918420201,0.65156653411535,1.21079900526674,0,0,1.90129757680748,1.27562579979026,1.46761051855863,1.90958672949042,0.901061357049038,0.32145117339416,1.14005097496499,0.79566670879636,0.730656615058536,3.51992488922645,2.18455444504853,0.889509253863555,0.426730222566507,1.20118796110804,1.72425731986345,0,0,2.27685187643779,0,0.382273228125229,2.64342657158052,1.12101712596307,1.31692042387539,3.34406609193516,3.93010762749165,2.87842098599313,3.17654341242288,5.86660079940463,5.20792586308207,3.89653456815823,2.00538822393312,3.82987679717288,5.31681347000691,5.1452734115353,1.79327847615945,2.73124629875744,1.15106533222573,1.93445012450094,2.02862160014537,2.07601188426885,1.87278579662799,2.09071047609954,2.03956816855619,2.68254345521345,2.74901956386104,5.31341353240956,1.59282707162048,2.60433381542567,0.950452044448374,3.16207750063323,1.66382594500744,1.24930726552346,1.89421801635213,4.10563998460523,2.82249440514625,2.13952156626806,2.31719046212478,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.567208902984407,1.10864698731282,0.087834785693126,0.916853528483988,0,0.370784442784429,0,0.174129737299267,0,1.66943437013739,1.71598473234038,1.48583000531826,0.39752481473341,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.626984899610432,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,3.87780264148325,0,0,0,1.72131935057184,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0.561803226808994,0.61246251376468,0.368502951935304,0.619954687054593,0,0,0,0,0.505008341862199,0.750711119231785,0.554128230968366,0,0,0.600952235626387,0.226864366320042,0.717558542755448,0.213557388818567,0.423863802319124,0.900273288253207,0.515262646192195,0.515281080091258,1.30281799432113,0,0.389748020644795,0,0.460249493211497,0.969876340912871,0.710019185033229,0.302256294682921,0.339121184620975,0,0.272746120590835,0.286804595389004,0.731842236777572,0.265059536642971,0.464775771478074,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0.721879481669586,0.709840800239063,0.337169380156203,0.482022059766964,0.55146986366197,0.217879444092406,0.237270619111097,1.34831308160164,0.588664395376038,0,0,0,0.8231480226628,0,0,0,0.590789906681404,1.32438929824395,0.860919069801795,0.171567810298526,0.219500570817251,0,0,0.185176890317059,0,0,0,0.115930404975077,0.587043471179108,0.144366447761074,1.38895653772983,0.190254152234598,1.58040879591855,3.43394464837949,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0.425325291727159,0,0.290633938513962,0,0.492663237895943,0.528290604079356,2.48793738648926,2.59415916150531,1.76739406796932,0.253991577168676,0.381988425558278,2.34434894420094,0,0,0,0,0.224262168690721,0.43596006883328,0,0.129271715757778,3.57656445851882,0,0,1.04007436911366,0.771622122786426,0,0.532844358032199,0,2.17048642156577,0.823240336780769,0.65147236858747,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.61642896765115,0.537182889719687,0.336255431980582,3.74358444383662,1.2937654491571,2.82354679815446,0,0,0,0.335032530668698,0.637938751653163,0,0,0.828831026872071,0.12269149171914,0,0,0,0.356857977594324,0.157702415033935,0,0.300946099727719,0,0,0,0.368738337083406,0.521301686808497,0.587403472388222,0.686286847621712,1.24060815673732,0.862856803274467,1.28073069364133,1.21251028578504,0,0.604780586659361,0.248107807818777,1.07423381301644,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0.241718899183244,0.40101294060657,0.460404944679482,0.34444334449382,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0.270946437543853,1.50506932156456,0,0,0,1.97333888981341,0.784306353074702,0,0.656029291399411,0,0.618246069886334,0.27470839445503,0.330037999682352,0.574265537996172,0,0,0.193341436584244,0,0.460511024178389,0.137836572484531,0.537101224341368,0.290033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| |||
|short_description=p@chr10:120840417..120840446,+ | |||
}} |
Revision as of 12:01, 10 September 2013
Short description: | p@chr10:120840417..120840446, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:120840417..120840446, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.66e-21 | 18 |
alpha-beta T cell | 4.66e-21 | 18 |
immature T cell | 4.66e-21 | 18 |
mature T cell | 4.66e-21 | 18 |
immature alpha-beta T cell | 4.66e-21 | 18 |
leukocyte | 6.27e-16 | 136 |
T cell | 1.64e-15 | 25 |
pro-T cell | 1.64e-15 | 25 |
lymphoid lineage restricted progenitor cell | 2.87e-15 | 52 |
lymphocyte | 8.03e-15 | 53 |
common lymphoid progenitor | 8.03e-15 | 53 |
hematopoietic stem cell | 1.10e-13 | 168 |
hematopoietic cell | 1.52e-13 | 177 |
CD8-positive, alpha-beta T cell | 2.16e-13 | 11 |
hematopoietic lineage restricted progenitor cell | 1.55e-12 | 120 |
CD4-positive, alpha-beta T cell | 4.98e-11 | 6 |
nongranular leukocyte | 8.73e-11 | 115 |
hematopoietic oligopotent progenitor cell | 1.14e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-10 | 161 |
intermediate monocyte | 1.27e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.27e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.