FFCP PHASE1:Hg19::chr10:116164922..116164943,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84632|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25901|TSSclassifier=W|UniProt=F6QUH3,Q8N4X5|association_with_transcript=-407bp_to_ENST00000369271,ENST00000541919,NM_001001936,NM_032550,uc001lbn.2,uc001lbo.2,uc001lbp.2,uc001lbr.1,uc010qse.1_5end|description=CAGE_peak_8_at_AFAP1L2_5end|id=chr10:116164922..116164943,-|ontology_enrichment_celltype=CL:0002076!7.75e-19!43;CL:0000066!2.43e-13!254;CL:0000223!7.59e-13!59;CL:0002251!1.52e-09!21;CL:0002368!1.53e-09!13;CL:0002159!4.06e-09!13|ontology_enrichment_celltype_v019=CL:0002076;2.54e-17;42!CL:0002251;3.96e-10;20!CL:0002231;9.37e-09;3!CL:0000307;9.37e-09;3!CL:0002621;9.37e-09;3!CL:0002368;1.72e-07;13|ontology_enrichment_celltype_v019_2=CL:0002076,8.78e-21,42;CL:0000223,2.42e-14,58;CL:0002251,4.39e-10,20;CL:0002621,8.36e-09,3;CL:0002231,1.69e-08,3;CL:0000068,1.97e-08,3;CL:0000069,1.97e-08,3;CL:0000307,1.97e-08,3;CL:0000377,1.97e-08,3;CL:0000066,1.54e-07,253;CL:0002368,2.08e-07,13|ontology_enrichment_development_v019=CL:0000377;9.37e-09;3!UBERON:0005754;9.88e-08;1!UBERON:0006242;3.50e-07;1!CL:0000223;4.41e-07;58|ontology_enrichment_disease=DOID:1749!1.22e-13!14;DOID:305!5.62e-07!106|ontology_enrichment_disease_v019=DOID:3493;1.08e-12;2!DOID:3151;1.31e-07;1!DOID:3149;1.31e-07;1!DOID:1749;5.83e-07;14|ontology_enrichment_disease_v019_2=DOID:3493,9.60e-13,2;DOID:3151,1.44e-07,1;DOID:3149,1.44e-07,1;DOID:1749,4.10e-07,14|ontology_enrichment_uberon=UBERON:0004119!1.15e-18!169;UBERON:0000925!1.15e-18!169;UBERON:0006595!1.15e-18!169;UBERON:0001007!4.55e-13!155;UBERON:0001555!4.55e-13!155;UBERON:0007026!4.55e-13!155;UBERON:0005631!9.23e-09!14;UBERON:0000158!9.23e-09!14;UBERON:0000077!5.54e-08!130;UBERON:0004921!6.14e-08!129;UBERON:0004185!6.14e-08!129;UBERON:0000062!7.32e-08!511;UBERON:0004175!1.54e-07!25;UBERON:0001004!3.59e-07!72;UBERON:0005156!4.68e-07!59;UBERON:0000990!4.68e-07!59|ontology_enrichment_uberon_v019=UBERON:0006947;1.88e-09;3!UBERON:0004054;1.88e-09;3!UBERON:0001949;9.37e-09;3!UBERON:0000998;9.88e-08;1!UBERON:0006868;9.88e-08;1!UBERON:0001000;1.05e-07;1!UBERON:0005352;1.05e-07;1!UBERON:0003729;1.72e-07;13!UBERON:0005904;2.75e-07;4!UBERON:0003343;5.67e-07;4!UBERON:0004785;5.67e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.21e-10,160;UBERON:0000925,2.21e-10,160;UBERON:0006595,2.21e-10,160;UBERON:0006947,1.89e-09,3;UBERON:0004054,1.89e-09,3;UBERON:0001949,8.36e-09,3;UBERON:0000998,9.91e-08,1;UBERON:0006868,9.91e-08,1;UBERON:0001000,1.06e-07,1;UBERON:0005352,1.06e-07,1;UBERON:0003729,1.53e-07,13;UBERON:0005904,2.76e-07,4;UBERON:0003343,5.05e-07,4;UBERON:0004785,5.05e-07,4;UBERON:0001007,6.16e-07,145;UBERON:0001555,6.16e-07,145;UBERON:0007026,6.16e-07,145|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.818238361772504,1.14721838155602,0.243947412259191,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,0.402115889646523,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,0.283550194484773,0.358234090811393,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,1.19705285616665,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,2.14870389969272,0.576570202095319,1.78657797492418,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0,1.08890984861323,0,1.29151611801369,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,1.18785872333055,1.84296421259539,0,0,0,0,0,0,0.552567831062295,0,0,0,0,1.43789361835723,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0,0,3.55125962564451,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.979923974143776,0.783532859223623,0.34945333648406,0,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,0.586654148204409,0.240476460754601,1.06726497369676,0.19980960958213,0.432271251462318,0,0,0,0,2.59263438078475,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,2.34804281319486,0.630445658393585,0.367182116944987,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45369296252564,0,1.46742878817343,0.577628330751691,0,0,0,0.376051641746286,0,1.56302802246618,0,0,0.887136517302272,0,0,0,0.0634158101939068,0,0,0,0,1.02209942111676,0,0,0,0,0,0,0,0,0,0,0,0.470958557103084,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08064460229115,1.14553434272025,0,0,0,1.27595303699816,1.46301509978723,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0,0,0.71421575442263,0.705789743431384,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0.250707539292375,0,0,0,0,0.852935927603924,0.952257725854961,0,0.248298857183432,0.33639558774184,2.5458863311266,1.41482032270754,0.870866991587845,0,0.673520530145875,0.215166616178029,0,0.732629417498771,0,0,0.538951212639521,0,0,0,0.665756774185513,0,0|short_description=p8@AFAP1L2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84632 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25901 | |||
|TSSclassifier=W | |||
|UniProt=F6QUH3,Q8N4X5 | |||
|association_with_transcript=-407bp_to_ENST00000369271,ENST00000541919,NM_001001936,NM_032550,uc001lbn.2,uc001lbo.2,uc001lbp.2,uc001lbr.1,uc010qse.1_5end | |||
|description=CAGE_peak_8_at_AFAP1L2_5end | |||
|id=chr10:116164922..116164943,- | |||
|ontology_enrichment_celltype=CL:0002076!7.75e-19!43;CL:0000066!2.43e-13!254;CL:0000223!7.59e-13!59;CL:0002251!1.52e-09!21;CL:0002368!1.53e-09!13;CL:0002159!4.06e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.54e-17;42!CL:0002251;3.96e-10;20!CL:0002231;9.37e-09;3!CL:0000307;9.37e-09;3!CL:0002621;9.37e-09;3!CL:0002368;1.72e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.78e-21,42;CL:0000223,2.42e-14,58;CL:0002251,4.39e-10,20;CL:0002621,8.36e-09,3;CL:0002231,1.69e-08,3;CL:0000068,1.97e-08,3;CL:0000069,1.97e-08,3;CL:0000307,1.97e-08,3;CL:0000377,1.97e-08,3;CL:0000066,1.54e-07,253;CL:0002368,2.08e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;9.37e-09;3!UBERON:0005754;9.88e-08;1!UBERON:0006242;3.50e-07;1!CL:0000223;4.41e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.22e-13!14;DOID:305!5.62e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.08e-12;2!DOID:3151;1.31e-07;1!DOID:3149;1.31e-07;1!DOID:1749;5.83e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.60e-13,2;DOID:3151,1.44e-07,1;DOID:3149,1.44e-07,1;DOID:1749,4.10e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.15e-18!169;UBERON:0000925!1.15e-18!169;UBERON:0006595!1.15e-18!169;UBERON:0001007!4.55e-13!155;UBERON:0001555!4.55e-13!155;UBERON:0007026!4.55e-13!155;UBERON:0005631!9.23e-09!14;UBERON:0000158!9.23e-09!14;UBERON:0000077!5.54e-08!130;UBERON:0004921!6.14e-08!129;UBERON:0004185!6.14e-08!129;UBERON:0000062!7.32e-08!511;UBERON:0004175!1.54e-07!25;UBERON:0001004!3.59e-07!72;UBERON:0005156!4.68e-07!59;UBERON:0000990!4.68e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.88e-09;3!UBERON:0004054;1.88e-09;3!UBERON:0001949;9.37e-09;3!UBERON:0000998;9.88e-08;1!UBERON:0006868;9.88e-08;1!UBERON:0001000;1.05e-07;1!UBERON:0005352;1.05e-07;1!UBERON:0003729;1.72e-07;13!UBERON:0005904;2.75e-07;4!UBERON:0003343;5.67e-07;4!UBERON:0004785;5.67e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.21e-10,160;UBERON:0000925,2.21e-10,160;UBERON:0006595,2.21e-10,160;UBERON:0006947,1.89e-09,3;UBERON:0004054,1.89e-09,3;UBERON:0001949,8.36e-09,3;UBERON:0000998,9.91e-08,1;UBERON:0006868,9.91e-08,1;UBERON:0001000,1.06e-07,1;UBERON:0005352,1.06e-07,1;UBERON:0003729,1.53e-07,13;UBERON:0005904,2.76e-07,4;UBERON:0003343,5.05e-07,4;UBERON:0004785,5.05e-07,4;UBERON:0001007,6.16e-07,145;UBERON:0001555,6.16e-07,145;UBERON:0007026,6.16e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.818238361772504,1.14721838155602,0.243947412259191,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,0.402115889646523,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,0.283550194484773,0.358234090811393,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,1.19705285616665,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,2.14870389969272,0.576570202095319,1.78657797492418,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0,1.08890984861323,0,1.29151611801369,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,1.18785872333055,1.84296421259539,0,0,0,0,0,0,0.552567831062295,0,0,0,0,1.43789361835723,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0,0,3.55125962564451,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.979923974143776,0.783532859223623,0.34945333648406,0,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,0.586654148204409,0.240476460754601,1.06726497369676,0.19980960958213,0.432271251462318,0,0,0,0,2.59263438078475,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,2.34804281319486,0.630445658393585,0.367182116944987,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45369296252564,0,1.46742878817343,0.577628330751691,0,0,0,0.376051641746286,0,1.56302802246618,0,0,0.887136517302272,0,0,0,0.0634158101939068,0,0,0,0,1.02209942111676,0,0,0,0,0,0,0,0,0,0,0,0.470958557103084,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08064460229115,1.14553434272025,0,0,0,1.27595303699816,1.46301509978723,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0,0,0.71421575442263,0.705789743431384,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0.250707539292375,0,0,0,0,0.852935927603924,0.952257725854961,0,0.248298857183432,0.33639558774184,2.5458863311266,1.41482032270754,0.870866991587845,0,0.673520530145875,0.215166616178029,0,0.732629417498771,0,0,0.538951212639521,0,0,0,0.665756774185513,0,0 | |||
|short_description=p8@AFAP1L2 | |||
}} |
Revision as of 11:51, 10 September 2013
Short description: | p8@AFAP1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_AFAP1L2_5end |
Coexpression cluster: | NA |
Association with transcript: | -407bp_to_ENST00000369271, ENST00000541919, NM_001001936, NM_032550, uc001lbn.2, uc001lbo.2, uc001lbp.2, uc001lbr.1, uc010qse.1_5end |
EntrezGene: | AFAP1L2 |
HGNC: | 25901 |
UniProt: | F6QUH3Q8N4X5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.78e-21 | 42 |
endodermal cell | 2.42e-14 | 58 |
epithelial cell of alimentary canal | 4.39e-10 | 20 |
gingival epithelial cell | 8.36e-09 | 3 |
epithelial cell of prostate | 1.69e-08 | 3 |
duct epithelial cell | 1.97e-08 | 3 |
branched duct epithelial cell | 1.97e-08 | 3 |
tracheal epithelial cell | 1.97e-08 | 3 |
tracheoblast | 1.97e-08 | 3 |
epithelial cell | 1.54e-07 | 253 |
respiratory epithelial cell | 2.08e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.21e-10 | 160 |
endoderm | 2.21e-10 | 160 |
presumptive endoderm | 2.21e-10 | 160 |
male genital duct | 1.89e-09 | 3 |
internal male genitalia | 1.89e-09 | 3 |
gingival epithelium | 8.36e-09 | 3 |
seminal vesicle | 9.91e-08 | 1 |
seminal fluid secreting gland | 9.91e-08 | 1 |
vas deferens | 1.06e-07 | 1 |
spermatic cord | 1.06e-07 | 1 |
mouth mucosa | 1.53e-07 | 13 |
duct of male reproductive system | 2.76e-07 | 4 |
mucosa of oral region | 5.05e-07 | 4 |
respiratory system mucosa | 5.05e-07 | 4 |
digestive system | 6.16e-07 | 145 |
digestive tract | 6.16e-07 | 145 |
primitive gut | 6.16e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.60e-13 | 2 |
skin squamous cell carcinoma | 1.44e-07 | 1 |
keratoacanthoma | 1.44e-07 | 1 |
squamous cell carcinoma | 4.10e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.