FFCP PHASE1:Hg19::chr10:115060479..115060492,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C6|description=CAGE_peak_at_chr10:115060479..115060492,-|id=chr10:115060479..115060492,-|ontology_enrichment_celltype=CL:0002057!5.81e-60!42;CL:0000860!1.19e-55!45;CL:0000766!1.95e-40!76;CL:0002393!1.94e-38!9;CL:0002397!1.94e-38!9;CL:0002194!9.91e-38!63;CL:0000576!9.91e-38!63;CL:0000040!9.91e-38!63;CL:0000559!9.91e-38!63;CL:0002009!1.92e-36!65;CL:0000839!1.52e-33!70;CL:0000557!5.18e-33!71;CL:0000738!2.33e-32!140;CL:0002087!5.51e-31!119;CL:0000763!7.04e-26!112;CL:0000049!7.04e-26!112;CL:0000037!2.92e-25!172;CL:0000566!2.92e-25!172;CL:0002031!7.24e-25!124;CL:0000988!1.50e-23!182;CL:0002032!1.21e-22!165;CL:0000837!1.21e-22!165;CL:0000767!8.16e-18!3;CL:0000134!7.81e-11!358;CL:0002320!1.67e-10!365;CL:0000219!2.44e-09!390;CL:0000034!3.62e-09!444;CL:0000842!1.23e-08!3;CL:0000623!2.01e-08!3;CL:0000825!2.01e-08!3;CL:0000875!5.22e-08!3;CL:0002396!5.22e-08!3;CL:0000048!6.09e-08!430;CL:0000723!9.63e-08!436;CL:0000094!5.69e-07!8|ontology_enrichment_celltype_v019=CL:0002393;2.20e-22;6!CL:0002397;2.20e-22;6!CL:0000226;1.39e-19;3!CL:0000842;1.39e-19;3!CL:0000860;2.23e-14;33!CL:0002057;2.23e-14;33!CL:0000766;1.19e-13;69!CL:0000576;1.58e-12;48!CL:0000473;6.98e-11;39!CL:0000234;6.98e-11;39!CL:0002087;9.75e-09;104|ontology_enrichment_celltype_v019_2=CL:0000860,9.27e-27,42;CL:0002057,9.27e-27,42;CL:0000473,2.55e-23,48;CL:0000234,2.55e-23,48;CL:0000226,1.85e-19,3;CL:0000842,1.85e-19,3;CL:0000766,1.36e-18,72;CL:0002194,1.69e-18,59;CL:0000576,1.69e-18,59;CL:0000040,1.69e-18,59;CL:0000559,1.69e-18,59;CL:0002009,7.11e-18,61;CL:0000839,1.77e-16,66;CL:0000557,3.18e-16,67;CL:0002393,3.69e-15,9;CL:0002397,3.69e-15,9;CL:0000738,9.64e-14,136;CL:0002087,9.78e-14,115;CL:0000763,4.09e-12,108;CL:0000049,4.09e-12,108;CL:0000037,6.78e-11,168;CL:0000988,2.82e-10,177;CL:0002031,1.02e-08,120;CL:0002032,8.68e-08,161;CL:0000837,8.68e-08,161|ontology_enrichment_development_v019=CL:0002057;7.56e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!8.12e-29!80;UBERON:0001474!1.68e-26!86;UBERON:0002390!2.24e-26!102;UBERON:0003061!2.24e-26!102;UBERON:0002193!1.37e-23!112;UBERON:0004765!6.60e-22!101;UBERON:0001434!6.60e-22!101;UBERON:0002405!1.09e-18!115;UBERON:0002204!1.89e-11!167;UBERON:0003081!6.28e-11!216;UBERON:0002384!4.72e-10!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.72e-16,98;UBERON:0003061,2.72e-16,98;UBERON:0002193,1.08e-14,108;UBERON:0002371,3.16e-14,76;UBERON:0001474,3.90e-13,82;UBERON:0004765,6.68e-12,90;UBERON:0002405,1.71e-11,93;UBERON:0001434,1.24e-10,100;UBERON:0003081,2.84e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.57345710739562,0.767658796194425,0.77408061658038,0,0,0,0,0,0,24.3757979754026,8.82395568868623,11.718587018656,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,7.23965929546899,3.22742341791913,0,0,0,0,9.48860066349798,6.09765151444578,8.31138263538754,0,0,0,0.580418477257168,0.56738522469114,1.86846674698672,0,0,0,0,0.736555271975129,0.949387162322653,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:115060479..115060492,- | |||
|id=chr10:115060479..115060492,- | |||
|ontology_enrichment_celltype=CL:0002057!5.81e-60!42;CL:0000860!1.19e-55!45;CL:0000766!1.95e-40!76;CL:0002393!1.94e-38!9;CL:0002397!1.94e-38!9;CL:0002194!9.91e-38!63;CL:0000576!9.91e-38!63;CL:0000040!9.91e-38!63;CL:0000559!9.91e-38!63;CL:0002009!1.92e-36!65;CL:0000839!1.52e-33!70;CL:0000557!5.18e-33!71;CL:0000738!2.33e-32!140;CL:0002087!5.51e-31!119;CL:0000763!7.04e-26!112;CL:0000049!7.04e-26!112;CL:0000037!2.92e-25!172;CL:0000566!2.92e-25!172;CL:0002031!7.24e-25!124;CL:0000988!1.50e-23!182;CL:0002032!1.21e-22!165;CL:0000837!1.21e-22!165;CL:0000767!8.16e-18!3;CL:0000134!7.81e-11!358;CL:0002320!1.67e-10!365;CL:0000219!2.44e-09!390;CL:0000034!3.62e-09!444;CL:0000842!1.23e-08!3;CL:0000623!2.01e-08!3;CL:0000825!2.01e-08!3;CL:0000875!5.22e-08!3;CL:0002396!5.22e-08!3;CL:0000048!6.09e-08!430;CL:0000723!9.63e-08!436;CL:0000094!5.69e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.20e-22;6!CL:0002397;2.20e-22;6!CL:0000226;1.39e-19;3!CL:0000842;1.39e-19;3!CL:0000860;2.23e-14;33!CL:0002057;2.23e-14;33!CL:0000766;1.19e-13;69!CL:0000576;1.58e-12;48!CL:0000473;6.98e-11;39!CL:0000234;6.98e-11;39!CL:0002087;9.75e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.27e-27,42;CL:0002057,9.27e-27,42;CL:0000473,2.55e-23,48;CL:0000234,2.55e-23,48;CL:0000226,1.85e-19,3;CL:0000842,1.85e-19,3;CL:0000766,1.36e-18,72;CL:0002194,1.69e-18,59;CL:0000576,1.69e-18,59;CL:0000040,1.69e-18,59;CL:0000559,1.69e-18,59;CL:0002009,7.11e-18,61;CL:0000839,1.77e-16,66;CL:0000557,3.18e-16,67;CL:0002393,3.69e-15,9;CL:0002397,3.69e-15,9;CL:0000738,9.64e-14,136;CL:0002087,9.78e-14,115;CL:0000763,4.09e-12,108;CL:0000049,4.09e-12,108;CL:0000037,6.78e-11,168;CL:0000988,2.82e-10,177;CL:0002031,1.02e-08,120;CL:0002032,8.68e-08,161;CL:0000837,8.68e-08,161 | |||
|ontology_enrichment_development_v019=CL:0002057;7.56e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.12e-29!80;UBERON:0001474!1.68e-26!86;UBERON:0002390!2.24e-26!102;UBERON:0003061!2.24e-26!102;UBERON:0002193!1.37e-23!112;UBERON:0004765!6.60e-22!101;UBERON:0001434!6.60e-22!101;UBERON:0002405!1.09e-18!115;UBERON:0002204!1.89e-11!167;UBERON:0003081!6.28e-11!216;UBERON:0002384!4.72e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.72e-16,98;UBERON:0003061,2.72e-16,98;UBERON:0002193,1.08e-14,108;UBERON:0002371,3.16e-14,76;UBERON:0001474,3.90e-13,82;UBERON:0004765,6.68e-12,90;UBERON:0002405,1.71e-11,93;UBERON:0001434,1.24e-10,100;UBERON:0003081,2.84e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.57345710739562,0.767658796194425,0.77408061658038,0,0,0,0,0,0,24.3757979754026,8.82395568868623,11.718587018656,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,7.23965929546899,3.22742341791913,0,0,0,0,9.48860066349798,6.09765151444578,8.31138263538754,0,0,0,0.580418477257168,0.56738522469114,1.86846674698672,0,0,0,0,0.736555271975129,0.949387162322653,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:115060479..115060492,- | |||
}} |
Revision as of 11:49, 10 September 2013
Short description: | p@chr10:115060479..115060492, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:115060479..115060492, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.27e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.27e-27 | 42 |
defensive cell | 2.55e-23 | 48 |
phagocyte | 2.55e-23 | 48 |
single nucleate cell | 1.85e-19 | 3 |
mononuclear cell | 1.85e-19 | 3 |
myeloid leukocyte | 1.36e-18 | 72 |
monopoietic cell | 1.69e-18 | 59 |
monocyte | 1.69e-18 | 59 |
monoblast | 1.69e-18 | 59 |
promonocyte | 1.69e-18 | 59 |
macrophage dendritic cell progenitor | 7.11e-18 | 61 |
myeloid lineage restricted progenitor cell | 1.77e-16 | 66 |
granulocyte monocyte progenitor cell | 3.18e-16 | 67 |
intermediate monocyte | 3.69e-15 | 9 |
CD14-positive, CD16-positive monocyte | 3.69e-15 | 9 |
leukocyte | 9.64e-14 | 136 |
nongranular leukocyte | 9.78e-14 | 115 |
myeloid cell | 4.09e-12 | 108 |
common myeloid progenitor | 4.09e-12 | 108 |
hematopoietic stem cell | 6.78e-11 | 168 |
hematopoietic cell | 2.82e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 1.02e-08 | 120 |
hematopoietic oligopotent progenitor cell | 8.68e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.72e-16 | 98 |
blood island | 2.72e-16 | 98 |
hemolymphoid system | 1.08e-14 | 108 |
bone marrow | 3.16e-14 | 76 |
bone element | 3.90e-13 | 82 |
skeletal element | 6.68e-12 | 90 |
immune system | 1.71e-11 | 93 |
skeletal system | 1.24e-10 | 100 |
lateral plate mesoderm | 2.84e-07 | 203 |
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