FFCP PHASE1:Hg19::chr10:102289611..102289643,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4714,25956|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7703,23197|TSSclassifier=W|UniProt=O95169,Q5W143,E9PIZ8,E9PME4,E9PQ68,B4E2H6|association_with_transcript=0bp_to_ENST00000299166,ENST00000370320,ENST00000460375,ENST00000466088,ENST00000527595,ENST00000528174,ENST00000528425,ENST00000529437,ENST00000529568,ENST00000531189,ENST00000531258,ENST00000531418,ENST00000533549,ENST00000535773,ENST00000557395,NM_005004,uc001kri.1,uc009xwo.1,uc010qpq.1,uc010qpr.1_5end|description=CAGE_peak_1_at_NDUFB8_5end,CAGE_peak_1_at_SEC31B_5end|id=chr10:102289611..102289643,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!1.75e-16!86;UBERON:0007284!1.75e-16!86;UBERON:0001049!2.06e-16!57;UBERON:0005068!2.06e-16!57;UBERON:0006241!2.06e-16!57;UBERON:0007135!2.06e-16!57;UBERON:0000025!2.58e-16!194;UBERON:0002346!7.85e-16!90;UBERON:0002616!5.63e-15!59;UBERON:0002020!8.39e-14!34;UBERON:0003528!8.39e-14!34;UBERON:0002780!1.66e-13!41;UBERON:0001890!1.66e-13!41;UBERON:0006240!1.66e-13!41;UBERON:0003080!2.68e-13!42;UBERON:0000483!3.31e-13!309;UBERON:0001869!1.08e-12!32;UBERON:0000119!1.09e-12!312;UBERON:0000477!1.13e-12!286;UBERON:0003056!1.13e-12!61;UBERON:0001893!1.24e-12!34;UBERON:0004111!1.38e-12!241;UBERON:0000481!1.83e-12!347;UBERON:0002791!2.65e-12!33;UBERON:0001017!3.46e-12!82;UBERON:0000955!4.23e-12!69;UBERON:0006238!4.23e-12!69;UBERON:0005743!2.33e-11!86;UBERON:0002619!5.13e-11!22;UBERON:0000956!1.91e-10!25;UBERON:0000203!1.91e-10!25;UBERON:0000073!4.74e-10!94;UBERON:0001016!4.74e-10!94;UBERON:0001950!5.57e-10!20;UBERON:0000033!5.87e-10!123;UBERON:0000153!6.15e-10!129;UBERON:0007811!6.15e-10!129;UBERON:0000064!7.33e-10!219;UBERON:0007023!3.68e-08!115;UBERON:0003103!3.74e-08!69;UBERON:0004121!3.30e-07!169;UBERON:0000924!4.48e-07!173;UBERON:0006601!4.48e-07!173|ontology_enrichment_uberon_v019=UBERON:0003528;1.03e-11;34!UBERON:0002020;1.03e-11;34!UBERON:0002791;1.50e-11;32!UBERON:0001869;1.68e-11;32!UBERON:0002619;5.26e-11;22!UBERON:0001893;7.98e-11;34!UBERON:0000956;1.94e-10;25!UBERON:0000203;1.94e-10;25!UBERON:0002780;5.23e-10;41!UBERON:0001890;5.23e-10;41!UBERON:0001950;5.72e-10;20!UBERON:0000073;1.98e-09;53!UBERON:0002616;1.98e-09;53|ontology_enrichment_uberon_v019_2=UBERON:0003075,2.68e-18,82;UBERON:0007284,2.68e-18,82;UBERON:0002346,1.55e-17,86;UBERON:0010314,9.48e-17,132;UBERON:0001049,1.34e-16,56;UBERON:0005068,1.34e-16,56;UBERON:0006241,1.34e-16,56;UBERON:0007135,1.34e-16,56;UBERON:0000073,2.08e-16,53;UBERON:0002616,2.08e-16,53;UBERON:0000025,2.86e-16,192;UBERON:0000483,4.58e-14,306;UBERON:0003528,8.39e-14,34;UBERON:0002020,8.39e-14,34;UBERON:0000119,1.59e-13,309;UBERON:0002780,1.66e-13,41;UBERON:0001890,1.66e-13,41;UBERON:0003080,1.66e-13,41;UBERON:0006240,1.66e-13,41;UBERON:0003056,6.03e-13,61;UBERON:0002791,8.64e-13,32;UBERON:0004111,9.98e-13,240;UBERON:0001869,1.08e-12,32;UBERON:0001893,1.24e-12,34;UBERON:0010371,2.64e-12,104;UBERON:0001017,2.89e-12,81;UBERON:0000955,3.39e-12,68;UBERON:0006238,3.39e-12,68;UBERON:0002619,5.13e-11,22;UBERON:0001016,8.53e-11,89;UBERON:0000956,1.91e-10,25;UBERON:0000203,1.91e-10,25;UBERON:0001950,5.57e-10,20;UBERON:0003103,4.11e-08,68;UBERON:0007023,8.04e-08,114;UBERON:0004121,8.96e-08,171;UBERON:0000924,8.96e-08,171;UBERON:0006601,8.96e-08,171;UBERON:0011216,1.61e-07,223|phase1_expression=49.4165191615914,85.2120085086113,52.2940839196053,56.041047077753,74.1955416749298,68.0424048798288,172.243917154451,54.3279091147075,98.2057962031393,91.6587583150628,236.554595942653,75.7991561291698,132.411023070684,94.3099609555555,97.0994310882793,81.3513427206648,85.5826229794047,89.0978310272595,96.1227613617299,62.9148606772386,146.880497695862,164.877183497474,70.9865248085021,104.298311905538,98.048801523541,110.340957900042,107.469671589979,104.842760709821,62.5449200189757,49.8978217526376,43.5033306518174,92.8615436723716,101.807600547049,86.5224383790283,84.2843142313682,93.6895242092108,105.40255772121,50.9675775849327,58.3584342138112,64.0182068611763,65.159403003818,58.3008598834163,64.6514674761808,51.1801800504068,42.6999816368355,33.2340163827308,52.7613913775904,48.1066428985536,37.7841772492026,53.2230925795978,58.4046410886349,43.5127302994997,66.1911707014308,56.1571674717929,48.753535173963,49.6959776392476,42.0275471089083,39.5513332623349,65.1958690750022,49.1021411426423,54.3436556929185,58.3836801330487,50.8632326935161,46.4584978080637,64.4264509755456,53.9015963456583,54.8083579116106,51.7572250428891,44.8475309841373,43.4377689410233,73.2533398186376,40.8788175946197,45.8870461789282,56.4051614452885,58.678786790352,73.5901845734399,54.8163719994896,48.5071363878065,33.4309220329927,99.4694475656957,50.3259193313698,49.3193215164512,95.0379720091143,83.013068911844,75.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4714,25956 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7703,23197 | |||
|TSSclassifier=W | |||
|UniProt=O95169,Q5W143,E9PIZ8,E9PME4,E9PQ68,B4E2H6 | |||
|association_with_transcript=0bp_to_ENST00000299166,ENST00000370320,ENST00000460375,ENST00000466088,ENST00000527595,ENST00000528174,ENST00000528425,ENST00000529437,ENST00000529568,ENST00000531189,ENST00000531258,ENST00000531418,ENST00000533549,ENST00000535773,ENST00000557395,NM_005004,uc001kri.1,uc009xwo.1,uc010qpq.1,uc010qpr.1_5end | |||
|description=CAGE_peak_1_at_NDUFB8_5end,CAGE_peak_1_at_SEC31B_5end | |||
|id=chr10:102289611..102289643,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.75e-16!86;UBERON:0007284!1.75e-16!86;UBERON:0001049!2.06e-16!57;UBERON:0005068!2.06e-16!57;UBERON:0006241!2.06e-16!57;UBERON:0007135!2.06e-16!57;UBERON:0000025!2.58e-16!194;UBERON:0002346!7.85e-16!90;UBERON:0002616!5.63e-15!59;UBERON:0002020!8.39e-14!34;UBERON:0003528!8.39e-14!34;UBERON:0002780!1.66e-13!41;UBERON:0001890!1.66e-13!41;UBERON:0006240!1.66e-13!41;UBERON:0003080!2.68e-13!42;UBERON:0000483!3.31e-13!309;UBERON:0001869!1.08e-12!32;UBERON:0000119!1.09e-12!312;UBERON:0000477!1.13e-12!286;UBERON:0003056!1.13e-12!61;UBERON:0001893!1.24e-12!34;UBERON:0004111!1.38e-12!241;UBERON:0000481!1.83e-12!347;UBERON:0002791!2.65e-12!33;UBERON:0001017!3.46e-12!82;UBERON:0000955!4.23e-12!69;UBERON:0006238!4.23e-12!69;UBERON:0005743!2.33e-11!86;UBERON:0002619!5.13e-11!22;UBERON:0000956!1.91e-10!25;UBERON:0000203!1.91e-10!25;UBERON:0000073!4.74e-10!94;UBERON:0001016!4.74e-10!94;UBERON:0001950!5.57e-10!20;UBERON:0000033!5.87e-10!123;UBERON:0000153!6.15e-10!129;UBERON:0007811!6.15e-10!129;UBERON:0000064!7.33e-10!219;UBERON:0007023!3.68e-08!115;UBERON:0003103!3.74e-08!69;UBERON:0004121!3.30e-07!169;UBERON:0000924!4.48e-07!173;UBERON:0006601!4.48e-07!173 | |||
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| |||
|short_description=p1@NDUFB8,p1@SEC31B | |||
}} |
Revision as of 11:19, 10 September 2013
Short description: | p1@NDUFB8, p1@SEC31B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NDUFB8_5end, CAGE_peak_1_at_SEC31B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000299166, ENST00000370320, ENST00000460375, ENST00000466088, ENST00000527595, ENST00000528174, ENST00000528425, ENST00000529437, ENST00000529568, ENST00000531189, ENST00000531258, ENST00000531418, ENST00000533549, ENST00000535773, ENST00000557395, NM_005004, uc001kri.1, uc009xwo.1, uc010qpq.1, uc010qpr.1_5end |
EntrezGene: | 4714,25956 |
HGNC: | 23197&submit=Submit 7703, 23197 |
UniProt: | O95169Q5W143E9PIZ8E9PME4E9PQ68B4E2H6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.