FFCP PHASE1:Hg19::chrX:152990302..152990319,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=215 | |EntrezGene=215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=61 | |HGNC=61 | ||
|TSSclassifier=S | |||
|UniProt=P33897 | |UniProt=P33897 | ||
|association_with_transcript=-3bp_to_ENST00000218104,NM_000033,uc004fif.2_5end | |association_with_transcript=-3bp_to_ENST00000218104,NM_000033,uc004fif.2_5end | ||
Revision as of 01:15, 11 July 2013
| Short description: | p1@ABCD1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_ABCD1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -3bp_to_ENST00000218104, NM_000033, uc004fif.2_5end |
| EntrezGene: | ABCD1 |
| HGNC: | 61 |
| UniProt: | P33897 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ABCD1 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| macrophage dendritic cell progenitor | 1.84e-31 | 61 |
| myeloid leukocyte | 2.60e-31 | 72 |
| monopoietic cell | 3.30e-31 | 59 |
| monocyte | 3.30e-31 | 59 |
| monoblast | 3.30e-31 | 59 |
| promonocyte | 3.30e-31 | 59 |
| granulocyte monocyte progenitor cell | 3.25e-30 | 67 |
| defensive cell | 3.43e-29 | 48 |
| phagocyte | 3.43e-29 | 48 |
| myeloid lineage restricted progenitor cell | 8.46e-27 | 66 |
| Ontology term | p-value | n |
|---|---|---|
| lateral plate mesoderm | 3.68e-28 | 203 |
| bone marrow | 1.03e-26 | 76 |
| bone element | 2.36e-24 | 82 |
| hematopoietic system | 5.93e-24 | 98 |
| blood island | 5.93e-24 | 98 |
| immune system | 1.59e-22 | 93 |
| musculoskeletal system | 4.68e-22 | 167 |
| skeletal element | 9.00e-22 | 90 |
| hemolymphoid system | 1.62e-21 | 108 |
| mesoderm | 4.04e-20 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
