FFCP PHASE1:Hg19::chr7:100136791..100136806,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3268 | |EntrezGene=3268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5177 | |HGNC=5177 | ||
|TSSclassifier=S | |||
|UniProt=A4D2D6,O95081 | |UniProt=A4D2D6,O95081 | ||
|association_with_transcript=-27bp_to_ENST00000430857,NM_006076,uc003uvf.2,uc003uvg.1_5end | |association_with_transcript=-27bp_to_ENST00000430857,NM_006076,uc003uvf.2,uc003uvg.1_5end |
Revision as of 12:18, 10 July 2013
Short description: | p2@AGFG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AGFG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000430857, NM_006076, uc003uvf.2, uc003uvg.1_5end |
EntrezGene: | AGFG2 |
HGNC: | 5177 |
UniProt: | A4D2D6O95081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@AGFG2 |
---|
0
2
4
6
8
10
12
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.32e-37 | 114 |
neural tube | 7.14e-29 | 56 |
neural rod | 7.14e-29 | 56 |
future spinal cord | 7.14e-29 | 56 |
neural keel | 7.14e-29 | 56 |
regional part of nervous system | 3.40e-27 | 53 |
regional part of brain | 3.40e-27 | 53 |
neural plate | 5.62e-23 | 82 |
presumptive neural plate | 5.62e-23 | 82 |
regional part of forebrain | 2.76e-21 | 41 |
Showing 1 to 10 of 58 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.