FFCP PHASE1:Hg19::chr6:169691363..169691375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=W | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
Revision as of 09:16, 10 July 2013
| Short description: | p@chr6:169691363..169691375, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr6:169691363..169691375, - |
| Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr6:169691363..169691375- |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pneumocyte | 5.96e-34 | 3 |
| epithelial cell of pancreas | 5.56e-26 | 4 |
| epithelial cell of tracheobronchial tree | 2.45e-12 | 9 |
| epithelial cell of lower respiratory tract | 2.45e-12 | 9 |
| respiratory epithelial cell | 5.70e-09 | 13 |
| endodermal cell | 4.33e-08 | 58 |
| Ontology term | p-value | n |
|---|---|---|
| bronchoalveolar duct junction | 4.52e-50 | 2 |
| alveolar duct | 4.52e-50 | 2 |
| bronchiole | 4.52e-50 | 2 |
| pulmonary alveolus epithelium | 5.96e-34 | 3 |
| alveolus | 5.96e-34 | 3 |
| pulmonary lobule | 5.96e-34 | 3 |
| lobule | 5.96e-34 | 3 |
| alveolus of lung | 5.96e-34 | 3 |
| alveolar system | 5.96e-34 | 3 |
| pulmonary acinus | 5.96e-34 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| pancreas adenocarcinoma | 2.74e-50 | 2 |
| pancreatic carcinoma | 2.74e-50 | 2 |
| pancreatic ductal adenocarcinoma | 2.74e-50 | 2 |
| lung adenocarcinoma | 4.52e-50 | 2 |
| pancreatic cancer | 5.56e-26 | 4 |
| non-small cell lung carcinoma | 5.15e-21 | 5 |
| endocrine gland cancer | 7.67e-18 | 6 |
| bronchus cancer | 1.91e-15 | 7 |
| bronchogenic carcinoma | 1.91e-15 | 7 |
| lung carcinoma | 2.45e-12 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
