FFCP PHASE1:Hg19::chr2:50149221..50149234,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=N | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-240bp_to_AF087975_5end | |association_with_transcript=-240bp_to_AF087975_5end |
Revision as of 22:30, 8 July 2013
Short description: | p29@NRXN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_NRXN1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -240bp_to_AF087975_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p29@NRXN1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 8.12e-60 | 20 |
regional part of cerebral cortex | 1.29e-54 | 22 |
cerebral cortex | 2.60e-48 | 25 |
pallium | 2.60e-48 | 25 |
middle temporal gyrus | 1.34e-40 | 2 |
regional part of telencephalon | 4.75e-38 | 32 |
cerebral hemisphere | 4.75e-38 | 32 |
regional part of nervous system | 3.89e-36 | 53 |
regional part of brain | 3.89e-36 | 53 |
brain grey matter | 7.19e-36 | 34 |
Showing 1 to 10 of 51 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.