FFCP PHASE1:Hg19::chr19:3136918..3136931,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=W | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA |
Revision as of 16:01, 8 July 2013
Short description: | p@chr19:3136918..3136931, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:3136918..3136931, - |
Coexpression cluster: | C1451_immature_Sebocyte_squamous_Keratinocyte_Corneal_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr19:3136918..3136931- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.75e-21 | 42 |
epithelial cell | 2.15e-16 | 253 |
general ecto-epithelial cell | 3.32e-16 | 14 |
respiratory epithelial cell | 4.20e-15 | 13 |
endodermal cell | 1.10e-14 | 58 |
epithelial cell of alimentary canal | 8.34e-11 | 20 |
transitional epithelial cell | 3.26e-09 | 4 |
urothelial cell | 3.26e-09 | 4 |
stratified squamous epithelial cell | 1.69e-08 | 6 |
keratin accumulating cell | 1.69e-08 | 6 |
Showing 1 to 10 of 29 entries
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.35e-14 | 74 |
endoderm-derived structure | 1.22e-13 | 160 |
endoderm | 1.22e-13 | 160 |
presumptive endoderm | 1.22e-13 | 160 |
extraembryonic membrane | 1.35e-11 | 14 |
membranous layer | 1.35e-11 | 14 |
urothelium | 1.10e-10 | 5 |
neck | 1.23e-10 | 10 |
orifice | 1.47e-09 | 36 |
respiratory tract | 1.87e-09 | 54 |
Showing 1 to 10 of 32 entries
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.70e-17 | 14 |
Showing 1 to 1 of 1 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.