NonredundantMotifs:207

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant207
• db :UNIPROBE
• Id :Gcm1_secondary
• name :SCI09
• score :0.44591874875310084
  
• External refs:

EntrezGene:8521
UniProt:8521

• Internal refs:

EntrezGene:8521

Motif matrix

P0 A C G T 1 0.298360284626179 0.124864928840929 0.240783052041331 0.335991734491562 2 0.184299645185153 0.17461719160416 0.373392099087098 0.267691064123589 3 0.150631616427434 0.435098682963459 0.254062258194144 0.160207442414963 4 0.212569130734739 0.220346774757132 0.370970758259475 0.196113336248654 5 0.258171019602728 0.316689142831233 0.186896432220568 0.238243405345471 6 0.872370741639165 0.05170333320847 0.0707912362238046 0.00513468892856083 7 0.0115601519285019 0.0176715220534332 0.00974648864772653 0.961021837370338 8 0.888546215091524 0.0429637769696799 0.0617580753899475 0.00673193254884886 9 0.071365352493578 0.00998162295762339 0.801504821716069 0.117148202832729 10 0.0106570468781062 0.0149609902305669 0.949285828707523 0.0250961341838044 11 0.00449602133633187 0.00994130982819472 0.97838056019994 0.00718210863553357 12 0.0056454622449419 0.0102940436244647 0.972682109072685 0.0113783850579088 13 0.499894710036396 0.152322217980078 0.335875323944902 0.0119077480386241 14 0.109409732586614 0.346383955828245 0.380529062059147 0.163677249525994 15 0.371763615486741 0.0961816796074846 0.457998629174618 0.0740560757311557 16 0.45020714224879 0.392208089691539 0.0656863122590817 0.0918984558005887 17 0.104224395861056 0.228466891608051 0.391472950013122 0.275835762517771