NonredundantMotifs:187: Difference between revisions
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|entrez_gene_id=3097
|motif_cluster_2013_march_motif_members= /HOCOMOCO:ZEP2_si
|name=known187
|representative_motif_db=HOCOMOCO
|representative_motif_id=Z...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;1.4432989690721647;0.618556701030928;10.020618556701024;3.917525773195872!2;0.8247422680412368;3.298969072164944;8.74226804123712;3.134020618556704!3;2.474226804123712;4.948453608247424;0.0;8.577319587628864!4;5.360824742268048;0.8247422680412368;4.783505154639184;5.030927835051552!5;2.061855670103088;3.298969072164944;7.752577319587632;2.886597938144336!6;3.298969072164944;0.0;12.701030927835056;0.0!7;3.298969072164944;0.0;12.701030927835056;0.0!8;7.09278350515464;2.886597938144336;0.0;6.020618556701024!9;14.350515463917535;0.8247422680412368;0.8247422680412368;0.0!10;12.865979381443296;0.0;1.4845360824742273;1.64948453608248!11;0.0;9.072164948453617;3.958762886597936;2.969072164948448!12;2.680412371134016;7.134020618556704;2.680412371134016;3.505154639175264!13;0.8247422680412368;9.402061855670096;5.773195876288656;0.0!14;0.4123711340206192;8.74226804123712;6.432989690721648;0.4123711340206192 | |||
|entrez_gene_id=3097 | |entrez_gene_id=3097 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:ZEP2_si | |motif_cluster_2013_march_motif_members= /HOCOMOCO:ZEP2_si | ||
|name= | |name=non-redundant187 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=ZEP2_si | |representative_motif_id=ZEP2_si | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant187
- db :HOCOMOCO
- Id :ZEP2_si
- name :
- score :0.45808260922550365
- External refs:
- Internal refs:
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Sub Motif Members
