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Latest revision as of 10:22, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant164
  • db :HOCOMOCO
  • Id :ZBT7A_f1
  • name  :
  • score :3.4804772340711922
  • External refs:
EntrezGene:51341
UniProt:51341

  • Internal refs:
EntrezGene:51341


Motif matrix
P0ACGT
115.2506684491978469.6196524064171017.1169786096256676.07419786096255
22.91978609625668461.87700534759358320.9598930481283312.304812834224608
30.024.7139037433154778.6550802139037574.692513368983967
415.1203208556149816.6737967914438624.79679144385026811.47058823529413
52.81550802139037313.24331550802138622.002673796791440.0
64.6925133689839670.938502673796789611.57486631016042920.85561497326203
70.93850267379678960.033.26470588235293.8582887700534894
80.00.038.061497326203170.0
90.02.81550802139037326.7994652406416738.446524064171118
100.08.5508021390374195.83957219251338423.6711229946524
116.56951871657752412.5133689839572096.67379679144386212.304812834224608
120.938502673796789615.12032085561498113.4518716577540248.550802139037419
1312.51336898395720916.058823529411765.6310160427807463.8582887700534894
141.042780748663101324.5053475935828767.7165775401069414.796791443850268
152.81550802139037315.1203208556149817.71657754010694112.409090909090908
1615.9545454545454596.7780748663101627.7165775401069417.612299465240641
175.6310160427807467.71657754010694119.917112299465254.796791443850268

Sub Motif Members