NonredundantMotifs:163: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=3204
|motif_cluster_2013_march_motif_members= /HOCOMOCO:HXA7_f1
|name=known163
|representative_motif_db=HOCOMOCO
|representative_motif_id=H...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;6.7877094972067;4.664804469273742;5.782122905027917;1.7597765363128461!2;9.944134078212278;5.0279329608938435;1.0055865921787688;3.016759776536314!3;4.022346368715079;1.0055865921787688;0.0;13.966480446927354!4;2.9050279329608846;13.072625698324;1.0055865921787688;2.0111731843575296!5;7.932960893854747;3.016759776536314;5.0279329608938435;3.016759776536314!6;13.966480446927354;3.016759776536314;0.0;2.0111731843575296!7;3.016759776536314;2.9050279329608846;3.016759776536314;10.055865921787687!8;9.944134078212278;6.033519553072628;0.0;3.016759776536314!9;0.0;1.0055865921787688;15.977653631284884;2.0111731843575296!10;15.08379888268155;1.89944134078212;2.0111731843575296;0.0!11;0.0;2.0111731843575296;4.022346368715079;12.960893854748592!12;1.0055865921787688;0.0;1.0055865921787688;16.98324022346367!13;4.022346368715079;2.9050279329608846;12.067039106145236;0.0!14;4.022346368715079;2.9050279329608846;10.055865921787687;2.0111731843575296!15;7.290502793296083;5.279329608938535;3.2681564245810053;3.156424581005576 | |||
|entrez_gene_id=3204 | |entrez_gene_id=3204 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:HXA7_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:HXA7_f1 | ||
|name= | |name=non-redundant163 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=HXA7_f1 | |representative_motif_id=HXA7_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant163
- db :HOCOMOCO
- Id :HXA7_f1
- name :
- score :0.01411970486136284
- External refs:
- Internal refs:
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Sub Motif Members
